RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 UPP1Q16831 310 aa9.77□□□□□ -0.85
NPLOC4-204ENST00000570324 HYIQ5T013 277 aa9.77□□□□□ -0.85
NPLOC4-204ENST00000570324 IER5LQ5T953 404 aa9.77□□□□□ -0.85
NPLOC4-204ENST00000570324 ANKS3Q6ZW76 656 aa9.77□□□□□ -0.85
NPLOC4-204ENST00000570324 GPBP1Q86WP2 473 aa9.77□□□□□ -0.85
NPLOC4-204ENST00000570324 MYCT1Q8N699 235 aa9.77□□□□□ -0.85
NPLOC4-204ENST00000570324 FLCNQ8NFG4 579 aa9.77□□□□□ -0.85
NPLOC4-204ENST00000570324 FEZF2Q8TBJ5 459 aa9.77□□□□□ -0.85
NPLOC4-204ENST00000570324 CLSTN3Q9BQT9 956 aa9.77□□□□□ -0.85
NPLOC4-204ENST00000570324 NTPCRQ9BSD7 190 aaKnown RBP9.77□□□□□ -0.85
NPLOC4-204ENST00000570324 SMOC2Q9H3U7 446 aa9.77□□□□□ -0.85
NPLOC4-204ENST00000570324 GOLGA2P5Q9HBQ8 144 aa9.77□□□□□ -0.85
NPLOC4-204ENST00000570324 ODF2LQ9ULJ1 636 aa9.77□□□□□ -0.85
NPLOC4-204ENST00000570324 CDY1Q9Y6F8 540 aa9.77□□□□□ -0.85
NPLOC4-204ENST00000570324 MTCL1Q9Y4B5 1905 aaKnown RBP9.77□□□□□ -0.85
NPLOC4-204ENST00000570324 MYH11P35749 1972 aa9.77□□□□□ -0.85
NPLOC4-204ENST00000570324 DENND4AQ7Z401 1863 aa9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 NPHP3-ACAD11A0A0J9YXS1 232 aa9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 H7C4K7 107 aa9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 I3L4J1 428 aa9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 PODXLO00592 558 aa9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 FGFR3P22607 806 aa9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 FSHRP23945 695 aa9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 TKTP29401 623 aaKnown RBP9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 MARCKSP29966 332 aaPredicted RBP9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 RPL9P32969 192 aaKnown RBP9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 MCM4P33991 863 aa9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 LONP1P36776 959 aaKnown RBP9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 BRCC3P46736 316 aa9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 LIG4P49917 911 aa9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 MRE11P49959 708 aa9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 NUBP1P53384 320 aa9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 SLC12A3P55017 1021 aa9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 ARPP19P56211 112 aa9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 MAPK7Q13164 816 aa9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 RAB33AQ14088 237 aa9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 NOLC1Q14978 699 aaKnown RBP eCLIP9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 SF3A1Q15459 793 aaKnown RBP9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 UVSSAQ2YD98 709 aa9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 SEZ6Q53EL9 994 aa9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 AXDND1Q5T1B0 1012 aaPredicted RBP9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 ZPBP2Q6X784 338 aa9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 TAS1R3Q7RTX0 852 aa9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 HAUS6Q7Z4H7 955 aa9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 GRASPQ7Z6J2 395 aaPredicted RBP9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 PRSS33Q8NF86 280 aa9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 SLC7A14Q8TBB6 771 aa9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 ATOH1Q92858 354 aaPredicted RBP9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 NXPE3Q969Y0 559 aa9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 ZNF707Q96C28 371 aaPredicted RBP9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 ZBTB45Q96K62 511 aaPredicted RBP9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 SNX27Q96L92 541 aa9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 MYADMQ96S97 322 aa9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 PTPRHQ9HD43 1115 aa9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 MTRRQ9UBK8 725 aa9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 CCDC39Q9UFE4 941 aa9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 FBXW11Q9UKB1 542 aa9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 DUSP12Q9UNI6 340 aa9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 ZFP37Q9Y6Q3 630 aaPredicted RBP9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 MUC3AQ02505 3323 aa9.76□□□□□ -0.85
NPLOC4-204ENST00000570324 K7ENM7 598 aa9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 PRRG1O14668 218 aa9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 HNRNPDLO14979 420 aaKnown RBP9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 CCL16O15467 120 aa9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 XPOTO43592 962 aaKnown RBP9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 TRAK2O60296 914 aa9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 TBCAO75347 108 aaKnown RBP9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 LRG1P02750 347 aa9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 CFHP08603 1231 aa9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 CLTAP09496 248 aa9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 MAPTP10636 758 aaKnown RBP9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 LAMP2P13473 410 aa9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 KCNE1P15382 129 aa9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 SCP2P22307 547 aa9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 PROZP22891 400 aa9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 ABCD1P33897 745 aa9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 TXLNAP40222 546 aa9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 NCKAP1LP55160 1127 aa9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 PPP2R3AQ06190 1150 aa9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 KARSQ15046 597 aaKnown RBP9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 KYAT1Q16773 422 aa9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 TMEM119Q4V9L6 283 aa9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 ASTLQ6HA08 431 aaPredicted RBP9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 ALKAL1Q6UXT8 129 aa9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 SIX5Q8N196 739 aa9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 TMEM161BQ8NDZ6 487 aa9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 RSAD2Q8WXG1 361 aa9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 REEP2Q9BRK0 252 aa9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 PARVGQ9HBI0 331 aa9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 CNTN3Q9P232 1028 aa9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 EPS15L1Q9UBC2 864 aa9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 BACE2Q9Y5Z0 518 aa9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 TRIP11Q15643 1979 aa9.75□□□□□ -0.85
NPLOC4-204ENST00000570324 CITO14578 2027 aa9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 H0Y858 1186 aa9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 TULP1O00294 542 aaPredicted RBP9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 SYN3O14994 580 aa9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 ADAM12O43184 909 aa9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 NARSO43776 548 aaKnown RBP9.74□□□□□ -0.85
NPLOC4-204ENST00000570324 N4BP1O75113 896 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms