RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 ZNF845Q96IR2 970 aaPredicted RBP7.12□□□□□ -1.27
SMG1-217ENST00000569764 HDAC6Q9UBN7 1215 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 ZNF536O15090 1300 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 C17orf102A2RUQ5 167 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 B4E1Z4 1266 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 GPR37L1O60883 481 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 MAP3K6O95382 1288 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 ATP6V1B1P15313 513 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 GARTP22102 1010 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 CLCN6P51797 869 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 SMTNP53814 917 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 ELF2Q15723 593 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 CNGA3Q16281 694 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 HABP4Q5JVS0 413 aaKnown RBP7.12□□□□□ -1.27
SMG1-217ENST00000569764 CCDC183Q5T5S1 534 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 PDE12Q6L8Q7 609 aaKnown RBP7.12□□□□□ -1.27
SMG1-217ENST00000569764 LHFPL2Q6ZUX7 228 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 PNMA1Q8ND90 353 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 SPATA18Q8TC71 538 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 COG1Q8WTW3 980 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 TTC17Q96AE7 1141 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 TTC25Q96NG3 672 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 UQCC2Q9BRT2 126 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 C11orf84Q9BUA3 381 aaPredicted RBP7.12□□□□□ -1.27
SMG1-217ENST00000569764 UNC93B1Q9H1C4 597 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 ATP6V0A4Q9HBG4 840 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 SH2B1Q9NRF2 756 aaPredicted RBP7.12□□□□□ -1.27
SMG1-217ENST00000569764 FAM217BQ9NTX9 383 aaPredicted RBP7.12□□□□□ -1.27
SMG1-217ENST00000569764 LMCD1Q9NZU5 365 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 MCM8Q9UJA3 840 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 MTF2Q9Y483 593 aaPredicted RBP7.12□□□□□ -1.27
SMG1-217ENST00000569764 ABHD14A-ACY1A0A1B0GW23 586 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 SERTM1A2A2V5 107 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 K7ENM7 598 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 POLR3GO15318 223 aaPredicted RBP7.12□□□□□ -1.27
SMG1-217ENST00000569764 PFKFB2O60825 505 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 ELNP15502 786 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 PSMD6Q15008 389 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 LIN9Q5TKA1 542 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 CCDC149Q6ZUS6 474 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 HEATR3Q7Z4Q2 680 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 MFSD14AQ96MC6 490 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 RIPOR3Q96MK2 946 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 LMAN2LQ9H0V9 348 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 CDH19Q9H159 772 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 MMADHCQ9H3L0 296 aaPredicted RBP7.12□□□□□ -1.27
SMG1-217ENST00000569764 KIAA1586Q9HCI6 787 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 RAVER2Q9HCJ3 691 aaKnown RBP7.12□□□□□ -1.27
SMG1-217ENST00000569764 GTF2IRD1Q9UHL9 959 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 ZNF112Q9UJU3 913 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 CDC23Q9UJX2 597 aa7.12□□□□□ -1.27
SMG1-217ENST00000569764 SPDYE16A6NNV3 312 aaPredicted RBP7.11□□□□□ -1.27
SMG1-217ENST00000569764 GPR182O15218 404 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 PSAPP07602 524 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 SULT1E1P49888 294 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 EVCP57679 992 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 WSCD2Q2TBF2 565 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 DGLUCYQ7Z3D6 616 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 TMC6Q7Z403 805 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 SPATS2Q86XZ4 545 aaKnown RBP7.11□□□□□ -1.27
SMG1-217ENST00000569764 DEFB123Q8N688 67 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 MIPOL1Q8TD10 442 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 SHISA4Q96DD7 197 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 ZKSCAN3Q9BRR0 538 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 RIOK1Q9BRS2 568 aaKnown RBP7.11□□□□□ -1.27
SMG1-217ENST00000569764 TTPALQ9BTX7 342 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 MXD3Q9BW11 206 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 EHD2Q9NZN4 543 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 AKAP7Q9P0M2 348 aaPredicted RBP7.11□□□□□ -1.27
SMG1-217ENST00000569764 GINS2Q9Y248 185 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.11□□□□□ -1.27
SMG1-217ENST00000569764 LTBP1Q14766 1721 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 KIF2AO00139 706 aaPredicted RBP7.11□□□□□ -1.27
SMG1-217ENST00000569764 ATP6V1G1O75348 118 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 TADA3O75528 432 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 CYP17A1P05093 508 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 SFPQP23246 707 aaKnown RBP eCLIP7.11□□□□□ -1.27
SMG1-217ENST00000569764 CYP4A11Q02928 519 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 ELAVL2Q12926 359 aaKnown RBP7.11□□□□□ -1.27
SMG1-217ENST00000569764 SP140Q13342 867 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 HAUS3Q68CZ6 603 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 CCDC81Q6ZN84 652 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 KRT25Q7Z3Z0 450 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 IGDCC4Q8TDY8 1250 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 LRRN4Q8WUT4 740 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 ZNF333Q96JL9 665 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 GCOM2Q9BZD3 368 aaPredicted RBP7.11□□□□□ -1.27
SMG1-217ENST00000569764 FOXP3Q9BZS1 431 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 SYNDIG1Q9H7V2 258 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 TBC1D22BQ9NU19 505 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 ZSWIM5Q9P217 1185 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 FBXL21Q9UKT6 434 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 RIMKLBQ9ULI2 386 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 PCDHB9Q9Y5E1 797 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 PCDHB7Q9Y5E2 793 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 ADAMTSL1Q8N6G6 1762 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 ZSCAN9O15535 394 aaPredicted RBP7.11□□□□□ -1.27
SMG1-217ENST00000569764 NDUFB5O43674 189 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 ZNF254O75437 659 aa7.11□□□□□ -1.27
SMG1-217ENST00000569764 MX2P20592 715 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms