RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 DSG1Q02413 1049 aa12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 SOX4Q06945 474 aaPredicted RBP12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 ZBTB6Q15916 424 aa12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 ENOX2Q16206 610 aaKnown RBP12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 UPP1Q16831 310 aa12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 ZBTB41Q5SVQ8 909 aa12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 DCLRE1AQ6PJP8 1040 aa12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 CD300LGQ6UXG3 332 aa12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 UNC13DQ70J99 1090 aa12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 UROC1Q96N76 676 aa12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 ACCSQ96QU6 501 aa12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 MSTO1Q9BUK6 570 aa12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 GDPD2Q9HCC8 539 aa12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 MRPL17Q9NRX2 175 aaKnown RBP12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 USP25Q9UHP3 1055 aa12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 SERTAD1Q9UHV2 236 aa12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 CPSF3Q9UKF6 684 aaKnown RBP12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 BARX2Q9UMQ3 279 aaPredicted RBP12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 HCFC2Q9Y5Z7 792 aa12.08□□□□□ -0.48
SHCBP1-207ENST00000569702 SF3B1O75533 1304 aaKnown RBP eCLIP12.08□□□□□ -0.486e-6■■■■■ 103.4
SHCBP1-207ENST00000569702 BDP1A6H8Y1 2624 aa12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 TCF20Q9UGU0 1960 aaKnown RBP12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 PVALEFA0A1B0GWK0 134 aa12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 URODP06132 367 aa12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 CNPP09543 421 aaKnown RBP12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 IGFBP6P24592 240 aaPredicted RBP12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 CASP1P29466 404 aa12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 AFMP43652 599 aa12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 GLUD2P49448 558 aa12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 NDUFA8P51970 172 aa12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 POU5F1Q01860 360 aaKnown RBP12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 CUL4BQ13620 913 aa12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 POSTNQ15063 836 aa12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 USP41Q3LFD5 358 aa12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 PTCRAQ6ISU1 281 aaPredicted RBP12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 EPM2AIP1Q7L775 607 aaPredicted RBP12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 CEP57L1Q8IYX8 460 aa12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 SMRP1Q8NCR6 262 aa12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 GLIS3Q8NEA6 775 aa12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 ADAMTS19Q8TE59 1207 aa12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 SLC22A17Q8WUG5 538 aa12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 HPS3Q969F9 1004 aa12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 C18orf25Q96B23 403 aaPredicted RBP12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 DDX27Q96GQ7 796 aaKnown RBP12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 PAGE5Q96GU1 130 aa12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 KLHL5Q96PQ7 755 aa12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 TSPAN18Q96SJ8 248 aa12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 BLZF1Q9H2G9 400 aa12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 TMEM206Q9H813 350 aa12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 GOLGA2P5Q9HBQ8 144 aa12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 RXFP1Q9HBX9 757 aa12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 CD207Q9UJ71 328 aa12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 AGO2Q9UKV8 859 aaKnown RBP12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 EXOC7Q9UPT5 735 aa12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 SSX2IPQ9Y2D8 614 aa12.07□□□□□ -0.48
SHCBP1-207ENST00000569702 LACTBL1A8MY62 500 aa12.06□□□□□ -0.48
SHCBP1-207ENST00000569702 DLL1O00548 723 aa12.06□□□□□ -0.48
SHCBP1-207ENST00000569702 C2CD2LO14523 706 aa12.06□□□□□ -0.48
SHCBP1-207ENST00000569702 MBTPS2O43462 519 aa12.06□□□□□ -0.48
SHCBP1-207ENST00000569702 KLRC4O43908 158 aa12.06□□□□□ -0.48
SHCBP1-207ENST00000569702 B3GAT3O94766 335 aa12.06□□□□□ -0.48
SHCBP1-207ENST00000569702 PRPF6O94906 941 aaKnown RBP12.06□□□□□ -0.48
SHCBP1-207ENST00000569702 GARTP22102 1010 aa12.06□□□□□ -0.48
SHCBP1-207ENST00000569702 RPL9P32969 192 aaKnown RBP12.06□□□□□ -0.48
SHCBP1-207ENST00000569702 CA8P35219 290 aa12.06□□□□□ -0.48
SHCBP1-207ENST00000569702 HOXD13P35453 343 aa12.06□□□□□ -0.48
SHCBP1-207ENST00000569702 SYKP43405 635 aa12.06□□□□□ -0.48
SHCBP1-207ENST00000569702 ACOT2P49753 483 aa12.06□□□□□ -0.48
SHCBP1-207ENST00000569702 SMAD4Q13485 552 aaKnown RBP12.06□□□□□ -0.48
SHCBP1-207ENST00000569702 CLUL1Q15846 466 aa12.06□□□□□ -0.48
SHCBP1-207ENST00000569702 FAM26FQ5R3K3 315 aa12.06□□□□□ -0.48
SHCBP1-207ENST00000569702 ANKRD54Q6NXT1 300 aa12.06□□□□□ -0.48
SHCBP1-207ENST00000569702 SYCE2Q6PIF2 218 aa12.06□□□□□ -0.48
SHCBP1-207ENST00000569702 CRELD2Q6UXH1 353 aaPredicted RBP12.06□□□□□ -0.48
SHCBP1-207ENST00000569702 STXBP4Q6ZWJ1 553 aa12.06□□□□□ -0.48
SHCBP1-207ENST00000569702 GRAMD1CQ8IYS0 662 aa12.06□□□□□ -0.48
SHCBP1-207ENST00000569702 C3orf58Q8NDZ4 430 aa12.06□□□□□ -0.48
SHCBP1-207ENST00000569702 ZNF507Q8TCN5 953 aa12.06□□□□□ -0.48
SHCBP1-207ENST00000569702 HASPINQ8TF76 798 aa12.06□□□□□ -0.48
SHCBP1-207ENST00000569702 B3GALT6Q96L58 329 aa12.06□□□□□ -0.48
SHCBP1-207ENST00000569702 EMILIN2Q9BXX0 1053 aa12.06□□□□□ -0.48
SHCBP1-207ENST00000569702 S1PR5Q9H228 398 aa12.06□□□□□ -0.48
SHCBP1-207ENST00000569702 RPF1Q9H9Y2 349 aaKnown RBP12.06□□□□□ -0.48
SHCBP1-207ENST00000569702 CIZ1Q9ULV3 898 aaPredicted RBP12.06□□□□□ -0.48
SHCBP1-207ENST00000569702 PODXLO00592 558 aa12.05□□□□□ -0.48
SHCBP1-207ENST00000569702 EIF3DO15371 548 aaKnown RBP eCLIP12.05□□□□□ -0.48
SHCBP1-207ENST00000569702 TEX28O15482 410 aa12.05□□□□□ -0.48
SHCBP1-207ENST00000569702 MYL1P05976 194 aa12.05□□□□□ -0.48
SHCBP1-207ENST00000569702 SRGAP2BP0DMP2 458 aa12.05□□□□□ -0.48
SHCBP1-207ENST00000569702 IL9P15248 144 aa12.05□□□□□ -0.48
SHCBP1-207ENST00000569702 HOXB8P17481 243 aaPredicted RBP12.05□□□□□ -0.48
SHCBP1-207ENST00000569702 CYP3A5P20815 502 aa12.05□□□□□ -0.48
SHCBP1-207ENST00000569702 LRPAP1P30533 357 aa12.05□□□□□ -0.48
SHCBP1-207ENST00000569702 CLCN4P51793 760 aa12.05□□□□□ -0.48
SHCBP1-207ENST00000569702 PPP2R3AQ06190 1150 aa12.05□□□□□ -0.48
SHCBP1-207ENST00000569702 SPAG1Q07617 926 aa12.05□□□□□ -0.48
SHCBP1-207ENST00000569702 ELAVL2Q12926 359 aaKnown RBP12.05□□□□□ -0.48
SHCBP1-207ENST00000569702 SMAD2Q15796 467 aaKnown RBP12.05□□□□□ -0.48
SHCBP1-207ENST00000569702 RTP2Q5QGT7 225 aa12.05□□□□□ -0.48
SHCBP1-207ENST00000569702 FAM171A1Q5VUB5 890 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms