RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 GET4Q7L5D6 327 aaPredicted RBP15.2■□□□□ 0.02
GTF3C1-211ENST00000569653 TMEM161BQ8NDZ6 487 aa15.2■□□□□ 0.02
GTF3C1-211ENST00000569653 C18orf25Q96B23 403 aaPredicted RBP15.2■□□□□ 0.02
GTF3C1-211ENST00000569653 SNX27Q96L92 541 aa15.2■□□□□ 0.02
GTF3C1-211ENST00000569653 RPP25Q9BUL9 199 aaKnown RBP15.2■□□□□ 0.02
GTF3C1-211ENST00000569653 BACH2Q9BYV9 841 aa15.2■□□□□ 0.02
GTF3C1-211ENST00000569653 KMT5AQ9NQR1 393 aa15.2■□□□□ 0.02
GTF3C1-211ENST00000569653 FRYLO94915 3013 aa15.2■□□□□ 0.02
GTF3C1-211ENST00000569653 KRBA1A5PL33 1030 aa15.19■□□□□ 0.02
GTF3C1-211ENST00000569653 B3GAT3O94766 335 aa15.19■□□□□ 0.02
GTF3C1-211ENST00000569653 GUCY2CP25092 1073 aa15.19■□□□□ 0.02
GTF3C1-211ENST00000569653 DMP1Q13316 513 aaPredicted RBP15.19■□□□□ 0.02
GTF3C1-211ENST00000569653 HTR4Q13639 388 aa15.19■□□□□ 0.02
GTF3C1-211ENST00000569653 RILPL1Q5EBL4 403 aa15.19■□□□□ 0.02
GTF3C1-211ENST00000569653 ASTLQ6HA08 431 aaPredicted RBP15.19■□□□□ 0.02
GTF3C1-211ENST00000569653 GRASPQ7Z6J2 395 aaPredicted RBP15.19■□□□□ 0.02
GTF3C1-211ENST00000569653 SLC44A3Q8N4M1 653 aa15.19■□□□□ 0.02
GTF3C1-211ENST00000569653 TBC1D32Q96NH3 1257 aa15.19■□□□□ 0.02
GTF3C1-211ENST00000569653 NTPCRQ9BSD7 190 aaKnown RBP15.19■□□□□ 0.02
GTF3C1-211ENST00000569653 MRPL4Q9BYD3 311 aaKnown RBP15.19■□□□□ 0.02
GTF3C1-211ENST00000569653 RAB34Q9BZG1 259 aa15.19■□□□□ 0.02
GTF3C1-211ENST00000569653 HCFC1R1Q9NWW0 138 aa15.19■□□□□ 0.02
GTF3C1-211ENST00000569653 MTRRQ9UBK8 725 aa15.19■□□□□ 0.02
GTF3C1-211ENST00000569653 SPTBN4Q9H254 2564 aa15.19■□□□□ 0.02
GTF3C1-211ENST00000569653 FAM186AA6NE01 2351 aa15.18■□□□□ 0.02
GTF3C1-211ENST00000569653 ANHXE9PGG2 379 aa15.18■□□□□ 0.02
GTF3C1-211ENST00000569653 NRG2O14511 850 aaPredicted RBP15.18■□□□□ 0.02
GTF3C1-211ENST00000569653 CCL16O15467 120 aa15.18■□□□□ 0.02
GTF3C1-211ENST00000569653 C8AP07357 584 aa15.18■□□□□ 0.02
GTF3C1-211ENST00000569653 MAPTP10636 758 aaKnown RBP15.18■□□□□ 0.02
GTF3C1-211ENST00000569653 HARSP12081 509 aaKnown RBP15.18■□□□□ 0.02
GTF3C1-211ENST00000569653 LAMP2P13473 410 aa15.18■□□□□ 0.02
GTF3C1-211ENST00000569653 OR1D2P34982 312 aa15.18■□□□□ 0.02
GTF3C1-211ENST00000569653 CREMQ03060 361 aa15.18■□□□□ 0.02
GTF3C1-211ENST00000569653 RAB33AQ14088 237 aa15.18■□□□□ 0.02
GTF3C1-211ENST00000569653 DCLRE1AQ6PJP8 1040 aa15.18■□□□□ 0.02
GTF3C1-211ENST00000569653 SYT2Q8N9I0 419 aaPredicted RBP15.18■□□□□ 0.02
GTF3C1-211ENST00000569653 DRC1Q96MC2 740 aa15.18■□□□□ 0.02
GTF3C1-211ENST00000569653 PRRX2Q99811 253 aa15.18■□□□□ 0.02
GTF3C1-211ENST00000569653 IGSF9Q9P2J2 1179 aa15.18■□□□□ 0.02
GTF3C1-211ENST00000569653 TSC2P49815 1807 aa15.17■□□□□ 0.02
GTF3C1-211ENST00000569653 TBC1D4O60343 1298 aa15.17■□□□□ 0.02
GTF3C1-211ENST00000569653 CFHP08603 1231 aa15.17■□□□□ 0.02
GTF3C1-211ENST00000569653 PLA2G4BP0C869 781 aa15.17■□□□□ 0.02
GTF3C1-211ENST00000569653 MCF2P10911 925 aa15.17■□□□□ 0.02
GTF3C1-211ENST00000569653 PLS3P13797 630 aa15.17■□□□□ 0.02
GTF3C1-211ENST00000569653 KCNE1P15382 129 aa15.17■□□□□ 0.02
GTF3C1-211ENST00000569653 ELAVL2Q12926 359 aaKnown RBP15.17■□□□□ 0.02
GTF3C1-211ENST00000569653 SLC10A6Q3KNW5 377 aa15.17■□□□□ 0.02
GTF3C1-211ENST00000569653 MPZL3Q6UWV2 235 aa15.17■□□□□ 0.02
GTF3C1-211ENST00000569653 SIX5Q8N196 739 aa15.17■□□□□ 0.02
GTF3C1-211ENST00000569653 FLCNQ8NFG4 579 aa15.17■□□□□ 0.02
GTF3C1-211ENST00000569653 ITFG1Q8TB96 612 aa15.17■□□□□ 0.02
GTF3C1-211ENST00000569653 SLC7A14Q8TBB6 771 aa15.17■□□□□ 0.02
GTF3C1-211ENST00000569653 SPIRE2Q8WWL2 714 aa15.17■□□□□ 0.02
GTF3C1-211ENST00000569653 FGF14Q92915 247 aa15.17■□□□□ 0.02
GTF3C1-211ENST00000569653 PIDD1Q9HB75 910 aa15.17■□□□□ 0.02
GTF3C1-211ENST00000569653 BLOC1S4Q9NUP1 217 aa15.17■□□□□ 0.02
GTF3C1-211ENST00000569653 CNTN3Q9P232 1028 aa15.17■□□□□ 0.02
GTF3C1-211ENST00000569653 TUBGCP4Q9UGJ1 667 aa15.17■□□□□ 0.02
GTF3C1-211ENST00000569653 DPP7Q9UHL4 492 aa15.17■□□□□ 0.02
GTF3C1-211ENST00000569653 STK24Q9Y6E0 443 aa15.17■□□□□ 0.02
GTF3C1-211ENST00000569653 CDY1Q9Y6F8 540 aa15.17■□□□□ 0.02
GTF3C1-211ENST00000569653 NUMBLQ9Y6R0 609 aa15.17■□□□□ 0.02
GTF3C1-211ENST00000569653 ZNF292O60281 2723 aa15.17■□□□□ 0.02
GTF3C1-211ENST00000569653 CACNA1IQ9P0X4 2223 aa15.17■□□□□ 0.02
GTF3C1-211ENST00000569653 GVINP1Q7Z2Y8 2422 aa15.16■□□□□ 0.02
GTF3C1-211ENST00000569653 PTPRZ1P23471 2315 aaPredicted RBP15.16■□□□□ 0.02
GTF3C1-211ENST00000569653 PODXLO00592 558 aa15.16■□□□□ 0.02
GTF3C1-211ENST00000569653 FAM189A1O60320 539 aa15.16■□□□□ 0.02
GTF3C1-211ENST00000569653 AOC1P19801 751 aa15.16■□□□□ 0.02
GTF3C1-211ENST00000569653 FSHRP23945 695 aa15.16■□□□□ 0.02
GTF3C1-211ENST00000569653 MCM2P49736 904 aa15.16■□□□□ 0.02
GTF3C1-211ENST00000569653 CLCN5P51795 746 aa15.16■□□□□ 0.02
GTF3C1-211ENST00000569653 ZBTB41Q5SVQ8 909 aa15.16■□□□□ 0.02
GTF3C1-211ENST00000569653 AXDND1Q5T1B0 1012 aaPredicted RBP15.16■□□□□ 0.02
GTF3C1-211ENST00000569653 STAMQ92783 540 aa15.16■□□□□ 0.02
GTF3C1-211ENST00000569653 CCDC94Q9BW85 323 aaPredicted RBP15.16■□□□□ 0.02
GTF3C1-211ENST00000569653 C17orf75Q9HAS0 396 aa15.16■□□□□ 0.02
GTF3C1-211ENST00000569653 ANKFY1Q9P2R3 1169 aa15.16■□□□□ 0.02
GTF3C1-211ENST00000569653 RBM19Q9Y4C8 960 aaKnown RBP15.16■□□□□ 0.02
GTF3C1-211ENST00000569653 BACE2Q9Y5Z0 518 aa15.16■□□□□ 0.02
GTF3C1-211ENST00000569653 SCN1AP35498 2009 aa15.16■□□□□ 0.02
GTF3C1-211ENST00000569653 MIA3Q5JRA6 1907 aa15.15■□□□□ 0.02
GTF3C1-211ENST00000569653 WDR27A2RRH5 827 aa15.15■□□□□ 0.02
GTF3C1-211ENST00000569653 HNRNPA1P09651 372 aaKnown RBP eCLIP15.15■□□□□ 0.02
GTF3C1-211ENST00000569653 CXCL8P10145 99 aa15.15■□□□□ 0.02
GTF3C1-211ENST00000569653 HOXA9P31269 272 aa15.15■□□□□ 0.02
GTF3C1-211ENST00000569653 TNFSF9P41273 254 aa15.15■□□□□ 0.02
GTF3C1-211ENST00000569653 NCKAP1LP55160 1127 aa15.15■□□□□ 0.02
GTF3C1-211ENST00000569653 ROR1Q01973 937 aa15.15■□□□□ 0.02
GTF3C1-211ENST00000569653 SPAG1Q07617 926 aa15.15■□□□□ 0.02
GTF3C1-211ENST00000569653 SLC5A9Q2M3M2 681 aa15.15■□□□□ 0.02
GTF3C1-211ENST00000569653 PPM1LQ5SGD2 360 aa15.15■□□□□ 0.02
GTF3C1-211ENST00000569653 VARS2Q5ST30 1063 aaKnown RBP15.15■□□□□ 0.02
GTF3C1-211ENST00000569653 LIN9Q5TKA1 542 aa15.15■□□□□ 0.02
GTF3C1-211ENST00000569653 ARL6IP4Q66PJ3 421 aaKnown RBP15.15■□□□□ 0.02
GTF3C1-211ENST00000569653 ELMSAN1Q6PJG2 1045 aa15.15■□□□□ 0.02
GTF3C1-211ENST00000569653 PARM1Q6UWI2 310 aa15.15■□□□□ 0.02
GTF3C1-211ENST00000569653 USP49Q70CQ1 688 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms