RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 H0YCG3 227 aa10.25□□□□□ -0.77
UBR1-210ENST00000569337 K7ENM7 598 aa10.25□□□□□ -0.77
UBR1-210ENST00000569337 RECQL4O94761 1208 aa10.25□□□□□ -0.77
UBR1-210ENST00000569337 GCNT3O95395 438 aa10.25□□□□□ -0.77
UBR1-210ENST00000569337 THP07101 528 aa10.25□□□□□ -0.77
UBR1-210ENST00000569337 SSTR3P32745 418 aaPredicted RBP10.25□□□□□ -0.77
UBR1-210ENST00000569337 NLRP12P59046 1061 aa10.25□□□□□ -0.77
UBR1-210ENST00000569337 RBM10P98175 930 aaKnown RBP10.25□□□□□ -0.77
UBR1-210ENST00000569337 GTF2BQ00403 316 aa10.25□□□□□ -0.77
UBR1-210ENST00000569337 SMAD4Q13485 552 aaKnown RBP10.25□□□□□ -0.77
UBR1-210ENST00000569337 SMAD2Q15796 467 aaKnown RBP10.25□□□□□ -0.77
UBR1-210ENST00000569337 DPCR1Q3MIW9 517 aa10.25□□□□□ -0.77
UBR1-210ENST00000569337 TMEM184AQ6ZMB5 413 aa10.25□□□□□ -0.77
UBR1-210ENST00000569337 GJD3Q8N144 294 aa10.25□□□□□ -0.77
UBR1-210ENST00000569337 SMRP1Q8NCR6 262 aa10.25□□□□□ -0.77
UBR1-210ENST00000569337 GSTCDQ8NEC7 633 aa10.25□□□□□ -0.77
UBR1-210ENST00000569337 VN1R2Q8NFZ6 395 aa10.25□□□□□ -0.77
UBR1-210ENST00000569337 ZNF507Q8TCN5 953 aa10.25□□□□□ -0.77
UBR1-210ENST00000569337 KCNN1Q92952 543 aa10.25□□□□□ -0.77
UBR1-210ENST00000569337 MED15Q96RN5 788 aa10.25□□□□□ -0.77
UBR1-210ENST00000569337 TARS2Q9BW92 718 aaKnown RBP10.25□□□□□ -0.77
UBR1-210ENST00000569337 ST6GALNAC4Q9H4F1 302 aa10.25□□□□□ -0.77
UBR1-210ENST00000569337 MRPL17Q9NRX2 175 aaKnown RBP10.25□□□□□ -0.77
UBR1-210ENST00000569337 RMND1Q9NWS8 449 aa10.25□□□□□ -0.77
UBR1-210ENST00000569337 PRKAG3Q9UGI9 489 aa10.25□□□□□ -0.77
UBR1-210ENST00000569337 IRAK3Q9Y616 596 aa10.25□□□□□ -0.77
UBR1-210ENST00000569337 ZMYM2Q9UBW7 1377 aa10.25□□□□□ -0.77
UBR1-210ENST00000569337 TISP43B9A030 160 aa10.24□□□□□ -0.77
UBR1-210ENST00000569337 C2CD2LO14523 706 aa10.24□□□□□ -0.77
UBR1-210ENST00000569337 CLASP2O75122 1294 aaKnown RBP10.24□□□□□ -0.77
UBR1-210ENST00000569337 TADA2AO75478 443 aa10.24□□□□□ -0.77
UBR1-210ENST00000569337 SOD2P04179 222 aa10.24□□□□□ -0.77
UBR1-210ENST00000569337 HOXB8P17481 243 aaPredicted RBP10.24□□□□□ -0.77
UBR1-210ENST00000569337 YARSP54577 528 aaKnown RBP10.24□□□□□ -0.77
UBR1-210ENST00000569337 TYRO3Q06418 890 aa10.24□□□□□ -0.77
UBR1-210ENST00000569337 TUSC3Q13454 348 aa10.24□□□□□ -0.77
UBR1-210ENST00000569337 KCNC3Q14003 757 aa10.24□□□□□ -0.77
UBR1-210ENST00000569337 BMT2Q1RMZ1 405 aa10.24□□□□□ -0.77
UBR1-210ENST00000569337 ZNF568Q3ZCX4 644 aa10.24□□□□□ -0.77
UBR1-210ENST00000569337 KIAA1841Q6NSI8 718 aa10.24□□□□□ -0.77
UBR1-210ENST00000569337 ANKRD54Q6NXT1 300 aa10.24□□□□□ -0.77
UBR1-210ENST00000569337 C11orf57Q6ZUT1 292 aaPredicted RBP10.24□□□□□ -0.77
UBR1-210ENST00000569337 ZBTB33Q86T24 672 aa10.24□□□□□ -0.77
UBR1-210ENST00000569337 NELFCDQ8IXH7 590 aa10.24□□□□□ -0.77
UBR1-210ENST00000569337 ADSSL1Q8N142 457 aa10.24□□□□□ -0.77
UBR1-210ENST00000569337 TRIML1Q8N9V2 468 aa10.24□□□□□ -0.77
UBR1-210ENST00000569337 CASP10Q92851 521 aa10.24□□□□□ -0.77
UBR1-210ENST00000569337 CCDC94Q9BW85 323 aaPredicted RBP10.24□□□□□ -0.77
UBR1-210ENST00000569337 VN1R3Q9BXE9 311 aa10.24□□□□□ -0.77
UBR1-210ENST00000569337 EMILIN2Q9BXX0 1053 aa10.24□□□□□ -0.77
UBR1-210ENST00000569337 CDT1Q9H211 546 aa10.24□□□□□ -0.77
UBR1-210ENST00000569337 TBX20Q9UMR3 447 aa10.24□□□□□ -0.77
UBR1-210ENST00000569337 SSX2IPQ9Y2D8 614 aa10.24□□□□□ -0.77
UBR1-210ENST00000569337 HCFC2Q9Y5Z7 792 aa10.24□□□□□ -0.77
UBR1-210ENST00000569337 CASTOR2A6NHX0 329 aa10.23□□□□□ -0.77
UBR1-210ENST00000569337 ANKRD63C9JTQ0 380 aa10.23□□□□□ -0.77
UBR1-210ENST00000569337 PTGESO14684 152 aa10.23□□□□□ -0.77
UBR1-210ENST00000569337 EIF3DO15371 548 aaKnown RBP eCLIP10.23□□□□□ -0.77
UBR1-210ENST00000569337 TGFB1I1O43294 461 aa10.23□□□□□ -0.77
UBR1-210ENST00000569337 TOM1L1O75674 476 aa10.23□□□□□ -0.77
UBR1-210ENST00000569337 LETM1O95202 739 aaPredicted RBP10.23□□□□□ -0.77
UBR1-210ENST00000569337 URODP06132 367 aa10.23□□□□□ -0.77
UBR1-210ENST00000569337 MCF2P10911 925 aa10.23□□□□□ -0.77
UBR1-210ENST00000569337 HARSP12081 509 aaKnown RBP10.23□□□□□ -0.77
UBR1-210ENST00000569337 KLRC2P26717 231 aa10.23□□□□□ -0.77
UBR1-210ENST00000569337 GRM5P41594 1212 aa10.23□□□□□ -0.77
UBR1-210ENST00000569337 MATR3P43243 847 aaKnown RBP eCLIP10.23□□□□□ -0.77
UBR1-210ENST00000569337 PMS1P54277 932 aaKnown RBP10.23□□□□□ -0.77
UBR1-210ENST00000569337 OSTNP61366 133 aa10.23□□□□□ -0.77
UBR1-210ENST00000569337 PTPN14Q15678 1187 aa10.23□□□□□ -0.77
UBR1-210ENST00000569337 COBLL1Q53SF7 1204 aa10.23□□□□□ -0.77
UBR1-210ENST00000569337 L1TD1Q5T7N2 865 aaKnown RBP10.23□□□□□ -0.77
UBR1-210ENST00000569337 SLC39A4Q6P5W5 647 aa10.23□□□□□ -0.77
UBR1-210ENST00000569337 MPZL3Q6UWV2 235 aa10.23□□□□□ -0.77
UBR1-210ENST00000569337 TAS1R1Q7RTX1 841 aa10.23□□□□□ -0.77
UBR1-210ENST00000569337 PPFIBP1Q86W92 1011 aa10.23□□□□□ -0.77
UBR1-210ENST00000569337 ADHFE1Q8IWW8 467 aa10.23□□□□□ -0.77
UBR1-210ENST00000569337 RABGGTAQ92696 567 aa10.23□□□□□ -0.77
UBR1-210ENST00000569337 CCDC47Q96A33 483 aaKnown RBP10.23□□□□□ -0.77
UBR1-210ENST00000569337 BICD1Q96G01 975 aa10.23□□□□□ -0.77
UBR1-210ENST00000569337 ACAP3Q96P50 834 aa10.23□□□□□ -0.77
UBR1-210ENST00000569337 POP1Q99575 1024 aaKnown RBP10.23□□□□□ -0.77
UBR1-210ENST00000569337 HERC2P3Q9BVR0 1158 aa10.23□□□□□ -0.77
UBR1-210ENST00000569337 KCTD10Q9H3F6 313 aa10.23□□□□□ -0.77
UBR1-210ENST00000569337 PTPRHQ9HD43 1115 aa10.23□□□□□ -0.77
UBR1-210ENST00000569337 CD320Q9NPF0 282 aa10.23□□□□□ -0.77
UBR1-210ENST00000569337 TOPORSQ9NS56 1045 aaPredicted RBP10.23□□□□□ -0.77
UBR1-210ENST00000569337 MARCH5Q9NX47 278 aa10.23□□□□□ -0.77
UBR1-210ENST00000569337 ADAM28Q9UKQ2 775 aa10.23□□□□□ -0.77
UBR1-210ENST00000569337 USP15Q9Y4E8 981 aaPredicted RBP10.23□□□□□ -0.77
UBR1-210ENST00000569337 ANK1P16157 1881 aa10.23□□□□□ -0.77
UBR1-210ENST00000569337 KIAA1671Q9BY89 1806 aa10.22□□□□□ -0.77
UBR1-210ENST00000569337 TRIM49BA6NDI0 452 aa10.22□□□□□ -0.77
UBR1-210ENST00000569337 SPDYE4A6NLX3 237 aa10.22□□□□□ -0.77
UBR1-210ENST00000569337 F8W810 466 aa10.22□□□□□ -0.77
UBR1-210ENST00000569337 ABLIM1O14639 778 aa10.22□□□□□ -0.77
UBR1-210ENST00000569337 CLDN3O15551 220 aa10.22□□□□□ -0.77
UBR1-210ENST00000569337 LILRB3O75022 631 aa10.22□□□□□ -0.77
UBR1-210ENST00000569337 CNPP09543 421 aaKnown RBP10.22□□□□□ -0.77
UBR1-210ENST00000569337 SCP2P22307 547 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms