RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 UBQLN1Q9UMX0 589 aaKnown RBP9.89□□□□□ -0.83
CHD9-219ENST00000569225 SLC16A3O15427 465 aaKnown RBP9.89□□□□□ -0.83
CHD9-219ENST00000569225 EPB41P11171 864 aaKnown RBP9.89□□□□□ -0.83
CHD9-219ENST00000569225 KRT13P13646 458 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 CYP3A5P20815 502 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 ERCC5P28715 1186 aaPredicted RBP9.89□□□□□ -0.83
CHD9-219ENST00000569225 RPL9P32969 192 aaKnown RBP9.89□□□□□ -0.83
CHD9-219ENST00000569225 OR1G1P47890 313 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 BCAR1P56945 870 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 KRT17Q04695 432 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 CYP24A1Q07973 514 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 PSMD6Q15008 389 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 DPCR1Q3MIW9 517 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 EPC2Q52LR7 807 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 ANKRD40Q6AI12 368 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 ZNF280BQ86YH2 543 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 COLGALT2Q8IYK4 626 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 RDH13Q8NBN7 331 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 ARNTL2Q8WYA1 636 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 LRCH3Q96II8 777 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 CEP63Q96MT8 703 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 C17orf80Q9BSJ5 609 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 MKNK1Q9BUB5 465 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 MIOSQ9NXC5 875 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 SPG21Q9NZD8 308 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 MTUS1Q9ULD2 1270 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 PLAGL2Q9UPG8 496 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 FAN1Q9Y2M0 1017 aa9.89□□□□□ -0.83
CHD9-219ENST00000569225 C5orf67F2Z3F1 127 aa9.88□□□□□ -0.83
CHD9-219ENST00000569225 MEFVO15553 781 aaPredicted RBP9.88□□□□□ -0.83
CHD9-219ENST00000569225 DDHD2O94830 711 aa9.88□□□□□ -0.83
CHD9-219ENST00000569225 GALTP07902 379 aa9.88□□□□□ -0.83
CHD9-219ENST00000569225 SLC11A1P49279 550 aa9.88□□□□□ -0.83
CHD9-219ENST00000569225 ENPEPQ07075 957 aa9.88□□□□□ -0.83
CHD9-219ENST00000569225 JADE1Q6IE81 842 aa9.88□□□□□ -0.83
CHD9-219ENST00000569225 INTS8Q75QN2 995 aaKnown RBP9.88□□□□□ -0.83
CHD9-219ENST00000569225 FAM186BQ8IYM0 893 aa9.88□□□□□ -0.83
CHD9-219ENST00000569225 CSGALNACT2Q8N6G5 542 aa9.88□□□□□ -0.83
CHD9-219ENST00000569225 ZSWIM2Q8NEG5 633 aa9.88□□□□□ -0.83
CHD9-219ENST00000569225 CCDC127Q96BQ5 260 aa9.88□□□□□ -0.83
CHD9-219ENST00000569225 TMEM169Q96HH4 297 aa9.88□□□□□ -0.83
CHD9-219ENST00000569225 MFSD14AQ96MC6 490 aa9.88□□□□□ -0.83
CHD9-219ENST00000569225 ZMAT2Q96NC0 199 aaKnown RBP9.88□□□□□ -0.83
CHD9-219ENST00000569225 NAT10Q9H0A0 1025 aaKnown RBP9.88□□□□□ -0.83
CHD9-219ENST00000569225 DNAJB4Q9UDY4 337 aa9.88□□□□□ -0.83
CHD9-219ENST00000569225 PUF60Q9UHX1 559 aaKnown RBP9.88□□□□□ -0.83
CHD9-219ENST00000569225 R3HCC1Q9Y3T6 440 aaKnown RBP9.88□□□□□ -0.83
CHD9-219ENST00000569225 TRIM49BA6NDI0 452 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 CASTOR2A6NHX0 329 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 ARHGEF15O94989 841 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 GNA14O95837 355 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 TNNC2P02585 160 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 NFICP08651 508 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 TMEM191BP0C7N4 346 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 LINC00271P0C7V0 271 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 CCDC192P0DO97 292 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 DLATP10515 647 aaKnown RBP9.87□□□□□ -0.83
CHD9-219ENST00000569225 AP3M2P53677 418 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 PMS1P54277 932 aaKnown RBP9.87□□□□□ -0.83
CHD9-219ENST00000569225 STX17P56962 302 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 TFAMQ00059 246 aaKnown RBP9.87□□□□□ -0.83
CHD9-219ENST00000569225 UBE3AQ05086 875 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 SPAG1Q07617 926 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 NAB2Q15742 525 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 TPD52L1Q16890 204 aaPredicted RBP9.87□□□□□ -0.83
CHD9-219ENST00000569225 DUOXA2Q1HG44 320 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 SPATA1Q5VX52 437 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 TTI2Q6NXR4 508 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 DCLRE1AQ6PJP8 1040 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 WDR49Q8IV35 697 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 ZC3H3Q8IXZ2 948 aaKnown RBP9.87□□□□□ -0.83
CHD9-219ENST00000569225 SLC39A11Q8N1S5 342 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 TMC2Q8TDI7 906 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 C18orf25Q96B23 403 aaPredicted RBP9.87□□□□□ -0.83
CHD9-219ENST00000569225 ANKRD36BP1Q96IX9 119 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 CGRRF1Q99675 332 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 CXCL16Q9H2A7 254 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 METTL14Q9HCE5 456 aaKnown RBP9.87□□□□□ -0.83
CHD9-219ENST00000569225 PDE11AQ9HCR9 933 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 HCSTQ9UBK5 93 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 PRG3Q9Y2Y8 225 aaPredicted RBP9.87□□□□□ -0.83
CHD9-219ENST00000569225 H3BNC9 293 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 PODXLO00592 558 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 NRP1O14786 923 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 STX10O60499 249 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 TADA2AO75478 443 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 AKAP3O75969 853 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 FGF18O76093 207 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 TNNI1P19237 187 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 PAX3P23760 479 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 CASP4P49662 377 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 PLCB3Q01970 1234 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 TYRO3Q06418 890 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 GPM6BQ13491 265 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 BMS1Q14692 1282 aaKnown RBP9.87□□□□□ -0.83
CHD9-219ENST00000569225 ZBTB6Q15916 424 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 PTPROQ16827 1216 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 FILIP1Q7Z7B0 1213 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 KLHL23Q8NBE8 558 aa9.87□□□□□ -0.83
CHD9-219ENST00000569225 IGSF21Q96ID5 467 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms