RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 ABLIM3O94929 683 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 CRTAMO95727 393 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 BPIP17213 487 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 RXRAP19793 462 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 TMPRSS15P98073 1019 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 GUCY1A3Q02108 690 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 ST3GAL1Q11201 340 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 STK3Q13188 491 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 ZNF460Q14592 562 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 WTAPQ15007 396 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 RAB3GAP1Q15042 981 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 ME3Q16798 604 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 SUPT20HL1Q3ZLR7 823 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 CEP128Q6ZU80 1094 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 RASGRP2Q7LDG7 609 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 DGKHQ86XP1 1220 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 CNTD1Q8N815 330 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 SNX21Q969T3 373 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 CCDC17Q96LX7 622 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 MAGEB10Q96LZ2 347 aaPredicted RBP9.13□□□□□ -0.95
CDH11-216ENST00000569128 JMJD8Q96S16 334 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 TMEM47Q9BQJ4 181 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 UBAC1Q9BSL1 405 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 ZNF341Q9BYN7 854 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 ZNF287Q9HBT7 754 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 TCP11L1Q9NUJ3 509 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 MTMR4Q9NYA4 1195 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 CLIP2Q9UDT6 1046 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 NAP1L2Q9ULW6 460 aaPredicted RBP9.13□□□□□ -0.95
CDH11-216ENST00000569128 APOBEC2Q9Y235 224 aaKnown RBP9.13□□□□□ -0.95
CDH11-216ENST00000569128 PCDHA8Q9Y5H6 950 aa9.13□□□□□ -0.95
CDH11-216ENST00000569128 WDR19Q8NEZ3 1342 aa9.12□□□□□ -0.95
CDH11-216ENST00000569128 MYH8P13535 1937 aa9.12□□□□□ -0.95
CDH11-216ENST00000569128 A0A1W2PRG0 241 aa9.12□□□□□ -0.95
CDH11-216ENST00000569128 UBE2Q2LH0YL09 131 aa9.12□□□□□ -0.95
CDH11-216ENST00000569128 JMJD7P0C870 316 aa9.12□□□□□ -0.95
CDH11-216ENST00000569128 EEF2P13639 858 aaKnown RBP9.12□□□□□ -0.95
CDH11-216ENST00000569128 YY1P25490 414 aa9.12□□□□□ -0.95
CDH11-216ENST00000569128 PDIA3P30101 505 aaKnown RBP9.12□□□□□ -0.95
CDH11-216ENST00000569128 ANP32AP39687 249 aaKnown RBP9.12□□□□□ -0.95
CDH11-216ENST00000569128 KIR2DL1P43626 348 aaPredicted RBP9.12□□□□□ -0.95
CDH11-216ENST00000569128 KIR2DL2P43627 348 aaPredicted RBP9.12□□□□□ -0.95
CDH11-216ENST00000569128 RTP1P59025 263 aa9.12□□□□□ -0.95
CDH11-216ENST00000569128 GPR85P60893 370 aa9.12□□□□□ -0.95
CDH11-216ENST00000569128 CCT2P78371 535 aaKnown RBP9.12□□□□□ -0.95
CDH11-216ENST00000569128 C11orf96Q7Z7L8 435 aa9.12□□□□□ -0.95
CDH11-216ENST00000569128 MTDHQ86UE4 582 aaKnown RBP9.12□□□□□ -0.95
CDH11-216ENST00000569128 SLCO6A1Q86UG4 719 aa9.12□□□□□ -0.95
CDH11-216ENST00000569128 IQCA1Q86XH1 822 aa9.12□□□□□ -0.95
CDH11-216ENST00000569128 ACER1Q8TDN7 264 aa9.12□□□□□ -0.95
CDH11-216ENST00000569128 ANKS1AQ92625 1134 aa9.12□□□□□ -0.95
CDH11-216ENST00000569128 TMX3Q96JJ7 454 aa9.12□□□□□ -0.95
CDH11-216ENST00000569128 CLMNQ96JQ2 1002 aa9.12□□□□□ -0.95
CDH11-216ENST00000569128 WRNIP1Q96S55 665 aa9.12□□□□□ -0.95
CDH11-216ENST00000569128 ZFYVE21Q9BQ24 234 aa9.12□□□□□ -0.95
CDH11-216ENST00000569128 CABP5Q9NP86 173 aa9.12□□□□□ -0.95
CDH11-216ENST00000569128 ZBTB21Q9ULJ3 1066 aa9.12□□□□□ -0.95
CDH11-216ENST00000569128 STX8Q9UNK0 236 aa9.12□□□□□ -0.95
CDH11-216ENST00000569128 LIMCH1Q9UPQ0 1083 aa9.12□□□□□ -0.95
CDH11-216ENST00000569128 PLIN4Q96Q06 1357 aa9.12□□□□□ -0.95
CDH11-216ENST00000569128 ERICH2A1L162 156 aa9.11□□□□□ -0.95
CDH11-216ENST00000569128 CCDC69A6NI79 296 aa9.11□□□□□ -0.95
CDH11-216ENST00000569128 HYAL3O43820 417 aaPredicted RBP9.11□□□□□ -0.95
CDH11-216ENST00000569128 NPHS1O60500 1241 aa9.11□□□□□ -0.95
CDH11-216ENST00000569128 FBXO21O94952 628 aa9.11□□□□□ -0.95
CDH11-216ENST00000569128 LIFRP42702 1097 aa9.11□□□□□ -0.95
CDH11-216ENST00000569128 ECE1P42892 770 aa9.11□□□□□ -0.95
CDH11-216ENST00000569128 NOVP48745 357 aa9.11□□□□□ -0.95
CDH11-216ENST00000569128 LRP8Q14114 963 aa9.11□□□□□ -0.95
CDH11-216ENST00000569128 SLC14A2Q15849 920 aa9.11□□□□□ -0.95
CDH11-216ENST00000569128 KIAA1755Q5JYT7 1200 aa9.11□□□□□ -0.95
CDH11-216ENST00000569128 IFIT1BQ5T764 474 aaKnown RBP9.11□□□□□ -0.95
CDH11-216ENST00000569128 CST9Q5W186 159 aa9.11□□□□□ -0.95
CDH11-216ENST00000569128 CXorf57Q6NSI4 855 aaKnown RBP9.11□□□□□ -0.95
CDH11-216ENST00000569128 APOA5Q6Q788 366 aa9.11□□□□□ -0.95
CDH11-216ENST00000569128 TMEM179Q6ZVK1 233 aa9.11□□□□□ -0.95
CDH11-216ENST00000569128 SGMS1Q86VZ5 419 aa9.11□□□□□ -0.95
CDH11-216ENST00000569128 CCDC83Q8IWF9 413 aa9.11□□□□□ -0.95
CDH11-216ENST00000569128 HSCBQ8IWL3 235 aa9.11□□□□□ -0.95
CDH11-216ENST00000569128 FBXL16Q8N461 479 aa9.11□□□□□ -0.95
CDH11-216ENST00000569128 ANKS4BQ8N8V4 417 aa9.11□□□□□ -0.95
CDH11-216ENST00000569128 AGBL5Q8NDL9 886 aa9.11□□□□□ -0.95
CDH11-216ENST00000569128 OR2W6PQ8NHA6 318 aa9.11□□□□□ -0.95
CDH11-216ENST00000569128 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.11□□□□□ -0.95
CDH11-216ENST00000569128 CHAMP1Q96JM3 812 aa9.11□□□□□ -0.95
CDH11-216ENST00000569128 RHOBTB2Q9BYZ6 727 aa9.11□□□□□ -0.95
CDH11-216ENST00000569128 MBNL3Q9NUK0 354 aaKnown RBP9.11□□□□□ -0.95
CDH11-216ENST00000569128 FBXL7Q9UJT9 491 aa9.11□□□□□ -0.95
CDH11-216ENST00000569128 GREB1LQ9C091 1923 aaPredicted RBP9.11□□□□□ -0.95
CDH11-216ENST00000569128 A0A1W2PQ45 241 aaPredicted RBP9.1□□□□□ -0.95
CDH11-216ENST00000569128 A0A1W2PQY0 241 aa9.1□□□□□ -0.95
CDH11-216ENST00000569128 GOLGA8BA8MQT2 603 aa9.1□□□□□ -0.95
CDH11-216ENST00000569128 CTNND1O60716 968 aaKnown RBP9.1□□□□□ -0.95
CDH11-216ENST00000569128 CELF2O95319 508 aaKnown RBP9.1□□□□□ -0.95
CDH11-216ENST00000569128 RNASE1P07998 156 aaKnown RBP9.1□□□□□ -0.95
CDH11-216ENST00000569128 TOP1P11387 765 aaKnown RBP9.1□□□□□ -0.95
CDH11-216ENST00000569128 ZSCAN20P17040 1043 aaPredicted RBP9.1□□□□□ -0.95
CDH11-216ENST00000569128 BCL6P41182 706 aa9.1□□□□□ -0.95
CDH11-216ENST00000569128 EVCP57679 992 aa9.1□□□□□ -0.95
CDH11-216ENST00000569128 ERVFC1P60507 584 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms