RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 CEACAM1P13688 526 aa9.61□□□□□ -0.87
SMG1-216ENST00000569122 HOXB3P14651 431 aaPredicted RBP9.61□□□□□ -0.87
SMG1-216ENST00000569122 CEBPBP17676 345 aa9.61□□□□□ -0.87
SMG1-216ENST00000569122 YWHABP31946 246 aaKnown RBP9.61□□□□□ -0.87
SMG1-216ENST00000569122 RDXP35241 583 aaKnown RBP9.61□□□□□ -0.87
SMG1-216ENST00000569122 RAP1GAPP47736 663 aa9.61□□□□□ -0.87
SMG1-216ENST00000569122 RBM25P49756 843 aaKnown RBP9.61□□□□□ -0.87
SMG1-216ENST00000569122 NPEPPSP55786 919 aa9.61□□□□□ -0.87
SMG1-216ENST00000569122 EMC2Q15006 297 aa9.61□□□□□ -0.87
SMG1-216ENST00000569122 NECTIN1Q15223 517 aa9.61□□□□□ -0.87
SMG1-216ENST00000569122 PTPAQ15257 358 aa9.61□□□□□ -0.87
SMG1-216ENST00000569122 PLA2G2CQ5R387 149 aa9.61□□□□□ -0.87
SMG1-216ENST00000569122 DIEXFQ68CQ4 756 aaKnown RBP9.61□□□□□ -0.87
SMG1-216ENST00000569122 PPP4R3AQ6IN85 833 aa9.61□□□□□ -0.87
SMG1-216ENST00000569122 HAUS6Q7Z4H7 955 aa9.61□□□□□ -0.87
SMG1-216ENST00000569122 RALGPS2Q86X27 583 aaPredicted RBP9.61□□□□□ -0.87
SMG1-216ENST00000569122 ZNF512Q96ME7 567 aaPredicted RBP9.61□□□□□ -0.87
SMG1-216ENST00000569122 FAM20AQ96MK3 541 aa9.61□□□□□ -0.87
SMG1-216ENST00000569122 CORO1BQ9BR76 489 aa9.61□□□□□ -0.87
SMG1-216ENST00000569122 SH3GLB2Q9NR46 395 aa9.61□□□□□ -0.87
SMG1-216ENST00000569122 NAP1L2Q9ULW6 460 aaPredicted RBP9.61□□□□□ -0.87
SMG1-216ENST00000569122 CDY1Q9Y6F8 540 aa9.61□□□□□ -0.87
SMG1-216ENST00000569122 CNOT1A5YKK6 2376 aaKnown RBP9.61□□□□□ -0.87
SMG1-216ENST00000569122 KLF18A0A0U1RQI7 1052 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 WDR27A2RRH5 827 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 CASTOR2A6NHX0 329 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 SRRM3A6NNA2 597 aaPredicted RBP9.6□□□□□ -0.87
SMG1-216ENST00000569122 TMEM189-UBE2V1I3L0A0 370 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 CHADO15335 359 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 ADAM12O43184 909 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 B3GAT3O94766 335 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 RHOBTB1O94844 696 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 KIF4AO95239 1232 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 NPTXRO95502 500 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 IGHDP01880 384 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 ARF4P18085 180 aaPredicted RBP9.6□□□□□ -0.87
SMG1-216ENST00000569122 FGFR3P22607 806 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 FCARP24071 287 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 ADD1P35611 737 aaKnown RBP9.6□□□□□ -0.87
SMG1-216ENST00000569122 NLRP5P59047 1200 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 ZNF252P-AS1Q0IIN9 211 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 FOXC1Q12948 553 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 SRSF5Q13243 272 aaKnown RBP9.6□□□□□ -0.87
SMG1-216ENST00000569122 PPP2R5CQ13362 524 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 GAS6Q14393 721 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 KRT32Q14532 448 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 ELF2Q15723 593 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 SLC5A9Q2M3M2 681 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 XKR9Q5GH70 373 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 PRSS36Q5K4E3 855 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 VITQ6UXI7 678 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 CAMKK1Q8N5S9 505 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 TBCKQ8TEA7 893 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 HASPINQ8TF76 798 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 RABGGTAQ92696 567 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 ZC3H10Q96K80 434 aaKnown RBP9.6□□□□□ -0.87
SMG1-216ENST00000569122 PRIMPOLQ96LW4 560 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 UROC1Q96N76 676 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 ZSWIM4Q9H7M6 989 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 KLK14Q9P0G3 267 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 BRPF3Q9ULD4 1205 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 MIA3Q5JRA6 1907 aa9.6□□□□□ -0.87
SMG1-216ENST00000569122 H7C4K7 107 aa9.59□□□□□ -0.87
SMG1-216ENST00000569122 MARCH6O60337 910 aa9.59□□□□□ -0.87
SMG1-216ENST00000569122 DGAT1O75907 488 aa9.59□□□□□ -0.87
SMG1-216ENST00000569122 ATF2P15336 505 aa9.59□□□□□ -0.87
SMG1-216ENST00000569122 CSRP1P21291 193 aaKnown RBP9.59□□□□□ -0.87
SMG1-216ENST00000569122 CDC27P30260 824 aa9.59□□□□□ -0.87
SMG1-216ENST00000569122 MPLP40238 635 aa9.59□□□□□ -0.87
SMG1-216ENST00000569122 EXOSC10Q01780 885 aaKnown RBP9.59□□□□□ -0.87
SMG1-216ENST00000569122 MBTD1Q05BQ5 628 aa9.59□□□□□ -0.87
SMG1-216ENST00000569122 RING1Q06587 406 aa9.59□□□□□ -0.87
SMG1-216ENST00000569122 KARSQ15046 597 aaKnown RBP9.59□□□□□ -0.87
SMG1-216ENST00000569122 EPHA7Q15375 998 aa9.59□□□□□ -0.87
SMG1-216ENST00000569122 AMHR2Q16671 573 aa9.59□□□□□ -0.87
SMG1-216ENST00000569122 TPGS2Q68CL5 300 aa9.59□□□□□ -0.87
SMG1-216ENST00000569122 GALNT17Q6IS24 598 aa9.59□□□□□ -0.87
SMG1-216ENST00000569122 SLC8B1Q6J4K2 584 aa9.59□□□□□ -0.87
SMG1-216ENST00000569122 APBB1IPQ7Z5R6 666 aaPredicted RBP9.59□□□□□ -0.87
SMG1-216ENST00000569122 C11orf74Q86VG3 221 aa9.59□□□□□ -0.87
SMG1-216ENST00000569122 TCEAL8Q8IYN2 117 aa9.59□□□□□ -0.87
SMG1-216ENST00000569122 FAM177A1Q8N128 213 aaPredicted RBP9.59□□□□□ -0.87
SMG1-216ENST00000569122 ZSCAN18Q8TBC5 510 aaPredicted RBP9.59□□□□□ -0.87
SMG1-216ENST00000569122 ETNPPLQ8TBG4 499 aa9.59□□□□□ -0.87
SMG1-216ENST00000569122 EXOC4Q96A65 974 aa9.59□□□□□ -0.87
SMG1-216ENST00000569122 NAP1L4Q99733 375 aaKnown RBP9.59□□□□□ -0.87
SMG1-216ENST00000569122 ADPGKQ9BRR6 497 aa9.59□□□□□ -0.87
SMG1-216ENST00000569122 RNF26Q9BY78 433 aaPredicted RBP9.59□□□□□ -0.87
SMG1-216ENST00000569122 LSG1Q9H089 658 aaKnown RBP9.59□□□□□ -0.87
SMG1-216ENST00000569122 CYP4F11Q9HBI6 524 aa9.59□□□□□ -0.87
SMG1-216ENST00000569122 ASAH2Q9NR71 780 aa9.59□□□□□ -0.87
SMG1-216ENST00000569122 PRMT7Q9NVM4 692 aaPredicted RBP9.59□□□□□ -0.87
SMG1-216ENST00000569122 DDX25Q9UHL0 483 aaKnown RBP9.59□□□□□ -0.87
SMG1-216ENST00000569122 TPCN1Q9ULQ1 816 aa9.59□□□□□ -0.87
SMG1-216ENST00000569122 SLC8A2Q9UPR5 921 aa9.59□□□□□ -0.87
SMG1-216ENST00000569122 F5P12259 2224 aa9.58□□□□□ -0.88
SMG1-216ENST00000569122 MYH9P35579 1960 aaKnown RBP9.58□□□□□ -0.88
SMG1-216ENST00000569122 MYBPHLA2RUH7 354 aa9.58□□□□□ -0.88
SMG1-216ENST00000569122 HEPACAM2A8MVW5 462 aa9.58□□□□□ -0.88
SMG1-216ENST00000569122 DPYSL4O14531 572 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms