RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 RBAKQ9NYW8 714 aaPredicted RBP11.35□□□□□ -0.59
CDH3-210ENST00000569117 PCDHB2Q9Y5E7 798 aa11.35□□□□□ -0.59
CDH3-210ENST00000569117 COL4A6Q14031 1691 aa11.35□□□□□ -0.59
CDH3-210ENST00000569117 TDRD15B5MCY1 1934 aaKnown RBP11.35□□□□□ -0.59
CDH3-210ENST00000569117 FNDC1Q4ZHG4 1894 aaPredicted RBP11.34□□□□□ -0.59
CDH3-210ENST00000569117 ZNF233A6NK53 670 aa11.34□□□□□ -0.59
CDH3-210ENST00000569117 KCNJ18B7U540 433 aa11.34□□□□□ -0.59
CDH3-210ENST00000569117 EFCAB14O75071 495 aa11.34□□□□□ -0.59
CDH3-210ENST00000569117 RECQL4O94761 1208 aa11.34□□□□□ -0.59
CDH3-210ENST00000569117 BAIAP3O94812 1187 aa11.34□□□□□ -0.59
CDH3-210ENST00000569117 STAG3L1P0CL83 205 aa11.34□□□□□ -0.59
CDH3-210ENST00000569117 CXCL8P10145 99 aa11.34□□□□□ -0.59
CDH3-210ENST00000569117 SYN1P17600 705 aa11.34□□□□□ -0.59
CDH3-210ENST00000569117 TNFSF9P41273 254 aa11.34□□□□□ -0.59
CDH3-210ENST00000569117 MCCD1P59942 119 aaPredicted RBP11.34□□□□□ -0.59
CDH3-210ENST00000569117 CYP24A1Q07973 514 aa11.34□□□□□ -0.59
CDH3-210ENST00000569117 KCNJ12Q14500 433 aa11.34□□□□□ -0.59
CDH3-210ENST00000569117 PSMD6Q15008 389 aa11.34□□□□□ -0.59
CDH3-210ENST00000569117 CCDC40Q4G0X9 1142 aa11.34□□□□□ -0.59
CDH3-210ENST00000569117 SEZ6Q53EL9 994 aa11.34□□□□□ -0.59
CDH3-210ENST00000569117 TCP11X2Q5H9J9 407 aa11.34□□□□□ -0.59
CDH3-210ENST00000569117 PSRC1Q6PGN9 363 aaPredicted RBP11.34□□□□□ -0.59
CDH3-210ENST00000569117 SLC24A5Q71RS6 500 aa11.34□□□□□ -0.59
CDH3-210ENST00000569117 INTS8Q75QN2 995 aaKnown RBP11.34□□□□□ -0.59
CDH3-210ENST00000569117 FRMD5Q7Z6J6 570 aa11.34□□□□□ -0.59
CDH3-210ENST00000569117 MRPL10Q7Z7H8 261 aaKnown RBP11.34□□□□□ -0.59
CDH3-210ENST00000569117 ZNF598Q86UK7 904 aaKnown RBP11.34□□□□□ -0.59
CDH3-210ENST00000569117 RTN4RL1Q86UN2 441 aaPredicted RBP11.34□□□□□ -0.59
CDH3-210ENST00000569117 ECHDC2Q86YB7 292 aa11.34□□□□□ -0.59
CDH3-210ENST00000569117 TRIM59Q8IWR1 403 aa11.34□□□□□ -0.59
CDH3-210ENST00000569117 TMEM192Q8IY95 271 aa11.34□□□□□ -0.59
CDH3-210ENST00000569117 SNX27Q96L92 541 aa11.34□□□□□ -0.59
CDH3-210ENST00000569117 MFSD14AQ96MC6 490 aa11.34□□□□□ -0.59
CDH3-210ENST00000569117 TOPORSQ9NS56 1045 aaPredicted RBP11.34□□□□□ -0.59
CDH3-210ENST00000569117 SNTG2Q9NY99 539 aa11.34□□□□□ -0.59
CDH3-210ENST00000569117 MAGEC2Q9UBF1 373 aaPredicted RBP11.34□□□□□ -0.59
CDH3-210ENST00000569117 ARMCX3Q9UH62 379 aaPredicted RBP11.34□□□□□ -0.59
CDH3-210ENST00000569117 ZMYND8Q9ULU4 1186 aaPredicted RBP11.34□□□□□ -0.59
CDH3-210ENST00000569117 HES2Q9Y543 173 aa11.34□□□□□ -0.59
CDH3-210ENST00000569117 NR2E3Q9Y5X4 410 aa11.34□□□□□ -0.59
CDH3-210ENST00000569117 ABHD14A-ACY1A0A1B0GW23 586 aa11.33□□□□□ -0.6
CDH3-210ENST00000569117 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.33□□□□□ -0.6
CDH3-210ENST00000569117 TTC26A0AVF1 554 aa11.33□□□□□ -0.6
CDH3-210ENST00000569117 MEFVO15553 781 aaPredicted RBP11.33□□□□□ -0.6
CDH3-210ENST00000569117 IL18RAPO95256 599 aa11.33□□□□□ -0.6
CDH3-210ENST00000569117 ACTN1P12814 892 aa11.33□□□□□ -0.6
CDH3-210ENST00000569117 ATP1A3P13637 1013 aa11.33□□□□□ -0.6
CDH3-210ENST00000569117 KRT13P13646 458 aa11.33□□□□□ -0.6
CDH3-210ENST00000569117 OSTNP61366 133 aa11.33□□□□□ -0.6
CDH3-210ENST00000569117 FAM189BP81408 668 aa11.33□□□□□ -0.6
CDH3-210ENST00000569117 IKBKEQ14164 716 aa11.33□□□□□ -0.6
CDH3-210ENST00000569117 HSP90AA4PQ58FG1 418 aa11.33□□□□□ -0.6
CDH3-210ENST00000569117 USP37Q86T82 979 aa11.33□□□□□ -0.6
CDH3-210ENST00000569117 PGBD4Q96DM1 585 aa11.33□□□□□ -0.6
CDH3-210ENST00000569117 ACAP3Q96P50 834 aa11.33□□□□□ -0.6
CDH3-210ENST00000569117 ELAC1Q9H777 363 aaKnown RBP11.33□□□□□ -0.6
CDH3-210ENST00000569117 RPF1Q9H9Y2 349 aaKnown RBP11.33□□□□□ -0.6
CDH3-210ENST00000569117 PLEKHA5Q9HAU0 1116 aa11.33□□□□□ -0.6
CDH3-210ENST00000569117 TMEM161AQ9NX61 479 aa11.33□□□□□ -0.6
CDH3-210ENST00000569117 LIMA1Q9UHB6 759 aaKnown RBP11.33□□□□□ -0.6
CDH3-210ENST00000569117 ENPP3O14638 875 aa11.32□□□□□ -0.6
CDH3-210ENST00000569117 INPPL1O15357 1258 aa11.32□□□□□ -0.6
CDH3-210ENST00000569117 EOMESO95936 686 aa11.32□□□□□ -0.6
CDH3-210ENST00000569117 ITGA4P13612 1032 aa11.32□□□□□ -0.6
CDH3-210ENST00000569117 VAMP7P51809 220 aa11.32□□□□□ -0.6
CDH3-210ENST00000569117 YARSP54577 528 aaKnown RBP11.32□□□□□ -0.6
CDH3-210ENST00000569117 WNT7BP56706 349 aa11.32□□□□□ -0.6
CDH3-210ENST00000569117 CLDN10P78369 228 aa11.32□□□□□ -0.6
CDH3-210ENST00000569117 PPP2R3AQ06190 1150 aa11.32□□□□□ -0.6
CDH3-210ENST00000569117 KRT31Q15323 416 aa11.32□□□□□ -0.6
CDH3-210ENST00000569117 SURF1Q15526 300 aa11.32□□□□□ -0.6
CDH3-210ENST00000569117 SLC10A6Q3KNW5 377 aa11.32□□□□□ -0.6
CDH3-210ENST00000569117 XKR4Q5GH76 650 aa11.32□□□□□ -0.6
CDH3-210ENST00000569117 POTEHQ6S545 545 aa11.32□□□□□ -0.6
CDH3-210ENST00000569117 AGMOQ6ZNB7 445 aa11.32□□□□□ -0.6
CDH3-210ENST00000569117 APTXQ7Z2E3 356 aaKnown RBP11.32□□□□□ -0.6
CDH3-210ENST00000569117 NPAS4Q8IUM7 802 aa11.32□□□□□ -0.6
CDH3-210ENST00000569117 CD302Q8IX05 232 aa11.32□□□□□ -0.6
CDH3-210ENST00000569117 CRIPAKQ8N1N5 446 aa11.32□□□□□ -0.6
CDH3-210ENST00000569117 ANKRD20A12PQ8NF67 263 aa11.32□□□□□ -0.6
CDH3-210ENST00000569117 PLEKHO2Q8TD55 490 aa11.32□□□□□ -0.6
CDH3-210ENST00000569117 PARD3BQ8TEW8 1205 aa11.32□□□□□ -0.6
CDH3-210ENST00000569117 RSPH1Q8WYR4 309 aa11.32□□□□□ -0.6
CDH3-210ENST00000569117 SLC35C1Q96A29 364 aa11.32□□□□□ -0.6
CDH3-210ENST00000569117 CGRRF1Q99675 332 aa11.32□□□□□ -0.6
CDH3-210ENST00000569117 LBHD1Q9BQE6 289 aaPredicted RBP11.32□□□□□ -0.6
CDH3-210ENST00000569117 ASB7Q9H672 318 aa11.32□□□□□ -0.6
CDH3-210ENST00000569117 RSAD1Q9HA92 442 aa11.32□□□□□ -0.6
CDH3-210ENST00000569117 UBN1Q9NPG3 1134 aa11.32□□□□□ -0.6
CDH3-210ENST00000569117 CNTN3Q9P232 1028 aa11.32□□□□□ -0.6
CDH3-210ENST00000569117 PCDH10Q9P2E7 1040 aa11.32□□□□□ -0.6
CDH3-210ENST00000569117 GIT1Q9Y2X7 761 aa11.32□□□□□ -0.6
CDH3-210ENST00000569117 FSD2A1L4K1 749 aa11.31□□□□□ -0.6
CDH3-210ENST00000569117 LRRIQ3A6PVS8 624 aaPredicted RBP11.31□□□□□ -0.6
CDH3-210ENST00000569117 MEIS3P2A8K0S8 358 aa11.31□□□□□ -0.6
CDH3-210ENST00000569117 ACRP10323 421 aa11.31□□□□□ -0.6
CDH3-210ENST00000569117 AKAP5P24588 427 aa11.31□□□□□ -0.6
CDH3-210ENST00000569117 MLH1P40692 756 aa11.31□□□□□ -0.6
CDH3-210ENST00000569117 MTIF2P46199 727 aaKnown RBP11.31□□□□□ -0.6
CDH3-210ENST00000569117 RGS19P49795 217 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms