RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 USP18Q9UMW8 372 aa16.41■□□□□ 0.22
USB1-214ENST00000568848 COL4A2P08572 1712 aa16.4■□□□□ 0.22
USB1-214ENST00000568848 REC8O95072 547 aa16.4■□□□□ 0.22
USB1-214ENST00000568848 LYPLA2O95372 231 aa16.4■□□□□ 0.22
USB1-214ENST00000568848 BAG4O95429 457 aaKnown RBP16.4■□□□□ 0.22
USB1-214ENST00000568848 FGFR3P22607 806 aa16.4■□□□□ 0.22
USB1-214ENST00000568848 TGM1P22735 817 aa16.4■□□□□ 0.22
USB1-214ENST00000568848 OSTNP61366 133 aa16.4■□□□□ 0.22
USB1-214ENST00000568848 CREMQ03060 361 aa16.4■□□□□ 0.22
USB1-214ENST00000568848 POU5F1BQ06416 359 aa16.4■□□□□ 0.22
USB1-214ENST00000568848 DMWDQ09019 674 aa16.4■□□□□ 0.22
USB1-214ENST00000568848 SRSF5Q13243 272 aaKnown RBP16.4■□□□□ 0.22
USB1-214ENST00000568848 PRPF4BQ13523 1007 aaKnown RBP16.4■□□□□ 0.22
USB1-214ENST00000568848 RAB33AQ14088 237 aa16.4■□□□□ 0.22
USB1-214ENST00000568848 CDCA2Q69YH5 1023 aaPredicted RBP16.4■□□□□ 0.22
USB1-214ENST00000568848 PPP4R3CPQ6ZMV5 832 aa16.4■□□□□ 0.22
USB1-214ENST00000568848 MTSS1LQ765P7 747 aa16.4■□□□□ 0.22
USB1-214ENST00000568848 SLFN12Q8IYM2 578 aa16.4■□□□□ 0.22
USB1-214ENST00000568848 HS6ST3Q8IZP7 471 aa16.4■□□□□ 0.22
USB1-214ENST00000568848 ATRIPQ8WXE1 791 aa16.4■□□□□ 0.22
USB1-214ENST00000568848 ZSWIM3Q96MP5 696 aa16.4■□□□□ 0.22
USB1-214ENST00000568848 NFKBIZQ9BYH8 718 aa16.4■□□□□ 0.22
USB1-214ENST00000568848 CCDC113Q9H0I3 377 aa16.4■□□□□ 0.22
USB1-214ENST00000568848 MTRRQ9UBK8 725 aa16.4■□□□□ 0.22
USB1-214ENST00000568848 STK36Q9NRP7 1315 aa16.4■□□□□ 0.22
USB1-214ENST00000568848 PFKFB2O60825 505 aa16.39■□□□□ 0.21
USB1-214ENST00000568848 XYLBO75191 536 aa16.39■□□□□ 0.21
USB1-214ENST00000568848 B3GAT3O94766 335 aa16.39■□□□□ 0.21
USB1-214ENST00000568848 SEC24AO95486 1093 aa16.39■□□□□ 0.21
USB1-214ENST00000568848 GUCY1B3Q02153 619 aa16.39■□□□□ 0.21
USB1-214ENST00000568848 PRKCQQ04759 706 aa16.39■□□□□ 0.21
USB1-214ENST00000568848 PCBP1Q15365 356 aaKnown RBP eCLIP16.39■□□□□ 0.21
USB1-214ENST00000568848 ZBTB41Q5SVQ8 909 aa16.39■□□□□ 0.21
USB1-214ENST00000568848 NT5DC1Q5TFE4 455 aa16.39■□□□□ 0.21
USB1-214ENST00000568848 CATSPER3Q86XQ3 398 aa16.39■□□□□ 0.21
USB1-214ENST00000568848 ZBTB44Q8NCP5 570 aa16.39■□□□□ 0.21
USB1-214ENST00000568848 MTMR9Q96QG7 549 aa16.39■□□□□ 0.21
USB1-214ENST00000568848 CORO1BQ9BR76 489 aa16.39■□□□□ 0.21
USB1-214ENST00000568848 PRMT7Q9NVM4 692 aaPredicted RBP16.39■□□□□ 0.21
USB1-214ENST00000568848 FBXO4Q9UKT5 387 aa16.39■□□□□ 0.21
USB1-214ENST00000568848 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.39■□□□□ 0.21
USB1-214ENST00000568848 ZFP37Q9Y6Q3 630 aaPredicted RBP16.39■□□□□ 0.21
USB1-214ENST00000568848 SDK1Q7Z5N4 2213 aa16.38■□□□□ 0.21
USB1-214ENST00000568848 WDR27A2RRH5 827 aa16.38■□□□□ 0.21
USB1-214ENST00000568848 N4BP3O15049 544 aa16.38■□□□□ 0.21
USB1-214ENST00000568848 MEFVO15553 781 aaPredicted RBP16.38■□□□□ 0.21
USB1-214ENST00000568848 NEMFO60524 1076 aa16.38■□□□□ 0.21
USB1-214ENST00000568848 LILRB5O75023 590 aa16.38■□□□□ 0.21
USB1-214ENST00000568848 CDR1P51861 262 aa16.38■□□□□ 0.21
USB1-214ENST00000568848 ROR1Q01973 937 aa16.38■□□□□ 0.21
USB1-214ENST00000568848 SPEM2Q0P670 501 aa16.38■□□□□ 0.21
USB1-214ENST00000568848 FAM78AQ5JUQ0 283 aa16.38■□□□□ 0.21
USB1-214ENST00000568848 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.38■□□□□ 0.21
USB1-214ENST00000568848 GPR65Q8IYL9 337 aa16.38■□□□□ 0.21
USB1-214ENST00000568848 ZNF687Q8N1G0 1237 aa16.38■□□□□ 0.21
USB1-214ENST00000568848 C2orf42Q9NWW7 574 aa16.38■□□□□ 0.21
USB1-214ENST00000568848 ZSCAN32Q9NX65 697 aa16.38■□□□□ 0.21
USB1-214ENST00000568848 USP24Q9UPU5 2620 aa16.38■□□□□ 0.21
USB1-214ENST00000568848 CFAP47Q6ZTR5 3102 aa16.38■□□□□ 0.21
USB1-214ENST00000568848 SPTLC1O15269 473 aa16.37■□□□□ 0.21
USB1-214ENST00000568848 C1RP00736 705 aa16.37■□□□□ 0.21
USB1-214ENST00000568848 TDGF1P13385 188 aa16.37■□□□□ 0.21
USB1-214ENST00000568848 HOXA9P31269 272 aa16.37■□□□□ 0.21
USB1-214ENST00000568848 MCM7P33993 719 aa16.37■□□□□ 0.21
USB1-214ENST00000568848 VIPR2P41587 438 aa16.37■□□□□ 0.21
USB1-214ENST00000568848 ECM1Q16610 540 aa16.37■□□□□ 0.21
USB1-214ENST00000568848 ZNF528Q3MIS6 628 aa16.37■□□□□ 0.21
USB1-214ENST00000568848 PRSS36Q5K4E3 855 aa16.37■□□□□ 0.21
USB1-214ENST00000568848 PADI6Q6TGC4 694 aa16.37■□□□□ 0.21
USB1-214ENST00000568848 ZBTB8OSQ8IWT0 167 aa16.37■□□□□ 0.21
USB1-214ENST00000568848 DIS3L2Q8IYB7 885 aaKnown RBP16.37■□□□□ 0.21
USB1-214ENST00000568848 CLDN23Q96B33 292 aa16.37■□□□□ 0.21
USB1-214ENST00000568848 PPP1R10Q96QC0 940 aaKnown RBP16.37■□□□□ 0.21
USB1-214ENST00000568848 EPC1Q9H2F5 836 aa16.37■□□□□ 0.21
USB1-214ENST00000568848 PRMT8Q9NR22 394 aaPredicted RBP16.37■□□□□ 0.21
USB1-214ENST00000568848 RALYQ9UKM9 306 aaKnown RBP16.37■□□□□ 0.21
USB1-214ENST00000568848 PCDHGA2Q9Y5H1 932 aa16.37■□□□□ 0.21
USB1-214ENST00000568848 MOSPD3O75425 235 aa16.36■□□□□ 0.21
USB1-214ENST00000568848 ECI2O75521 394 aa16.36■□□□□ 0.21
USB1-214ENST00000568848 CDKL5O76039 1030 aa16.36■□□□□ 0.21
USB1-214ENST00000568848 KCNA4P22459 653 aa16.36■□□□□ 0.21
USB1-214ENST00000568848 SOX9P48436 509 aa16.36■□□□□ 0.21
USB1-214ENST00000568848 SATB1Q01826 763 aa16.36■□□□□ 0.21
USB1-214ENST00000568848 ST3GAL1Q11201 340 aa16.36■□□□□ 0.21
USB1-214ENST00000568848 GAS6Q14393 721 aa16.36■□□□□ 0.21
USB1-214ENST00000568848 MAPK6Q16659 721 aa16.36■□□□□ 0.21
USB1-214ENST00000568848 ME3Q16798 604 aa16.36■□□□□ 0.21
USB1-214ENST00000568848 UPP1Q16831 310 aa16.36■□□□□ 0.21
USB1-214ENST00000568848 FAM187BQ17R55 369 aa16.36■□□□□ 0.21
USB1-214ENST00000568848 WDR44Q5JSH3 913 aa16.36■□□□□ 0.21
USB1-214ENST00000568848 TTC8Q8TAM2 541 aa16.36■□□□□ 0.21
USB1-214ENST00000568848 DEPTORQ8TB45 409 aa16.36■□□□□ 0.21
USB1-214ENST00000568848 NELL1Q92832 810 aa16.36■□□□□ 0.21
USB1-214ENST00000568848 C18orf25Q96B23 403 aaPredicted RBP16.36■□□□□ 0.21
USB1-214ENST00000568848 RSPRY1Q96DX4 576 aa16.36■□□□□ 0.21
USB1-214ENST00000568848 ZMAT2Q96NC0 199 aaKnown RBP16.36■□□□□ 0.21
USB1-214ENST00000568848 TM6SF1Q9BZW5 370 aa16.36■□□□□ 0.21
USB1-214ENST00000568848 CYP4F11Q9HBI6 524 aa16.36■□□□□ 0.21
USB1-214ENST00000568848 RBM12Q9NTZ6 932 aaKnown RBP16.36■□□□□ 0.21
USB1-214ENST00000568848 CACNA1GO43497 2377 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms