RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 RCOR1Q9UKL0 485 aa27.51■■□□□ 1.99
FANCA-228ENST00000567943 TBX20Q9UMR3 447 aa27.51■■□□□ 1.99
FANCA-228ENST00000567943 GPR37L1O60883 481 aa27.5■■□□□ 1.99
FANCA-228ENST00000567943 ALADP13716 330 aa27.5■■□□□ 1.99
FANCA-228ENST00000567943 RPL17P18621 184 aaKnown RBP27.5■■□□□ 1.99
FANCA-228ENST00000567943 YARSP54577 528 aaKnown RBP27.5■■□□□ 1.99
FANCA-228ENST00000567943 FAM171A1Q5VUB5 890 aa27.5■■□□□ 1.99
FANCA-228ENST00000567943 CES5AQ6NT32 575 aa27.5■■□□□ 1.99
FANCA-228ENST00000567943 TMC5Q6UXY8 1006 aa27.5■■□□□ 1.99
FANCA-228ENST00000567943 SFR1Q86XK3 245 aa27.5■■□□□ 1.99
FANCA-228ENST00000567943 C3orf58Q8NDZ4 430 aa27.5■■□□□ 1.99
FANCA-228ENST00000567943 DNAJC19Q96DA6 116 aa27.5■■□□□ 1.99
FANCA-228ENST00000567943 CHAMP1Q96JM3 812 aa27.5■■□□□ 1.99
FANCA-228ENST00000567943 TOPORSQ9NS56 1045 aaPredicted RBP27.5■■□□□ 1.99
FANCA-228ENST00000567943 CNTN3Q9P232 1028 aa27.5■■□□□ 1.99
FANCA-228ENST00000567943 MYO10Q9HD67 2058 aa27.49■■□□□ 1.99
FANCA-228ENST00000567943 ADH1AP07327 375 aa27.49■■□□□ 1.99
FANCA-228ENST00000567943 KCNE1P15382 129 aa27.49■■□□□ 1.99
FANCA-228ENST00000567943 SCP2P22307 547 aa27.49■■□□□ 1.99
FANCA-228ENST00000567943 MATR3P43243 847 aaKnown RBP eCLIP27.49■■□□□ 1.99
FANCA-228ENST00000567943 SLC10A6Q3KNW5 377 aa27.49■■□□□ 1.99
FANCA-228ENST00000567943 HERC4Q5GLZ8 1057 aaPredicted RBP27.49■■□□□ 1.99
FANCA-228ENST00000567943 DHX58Q96C10 678 aa27.49■■□□□ 1.99
FANCA-228ENST00000567943 MAN1C1Q9NR34 630 aa27.49■■□□□ 1.99
FANCA-228ENST00000567943 FNIP2Q9P278 1114 aa27.49■■□□□ 1.99
FANCA-228ENST00000567943 TECTAO75443 2155 aa27.48■■□□□ 1.99
FANCA-228ENST00000567943 TMEM189-UBE2V1I3L0A0 370 aa27.48■■□□□ 1.99
FANCA-228ENST00000567943 CLDN3O15551 220 aa27.48■■□□□ 1.99
FANCA-228ENST00000567943 FAM189A1O60320 539 aa27.48■■□□□ 1.99
FANCA-228ENST00000567943 PIGRP01833 764 aa27.48■■□□□ 1.99
FANCA-228ENST00000567943 SP100P23497 879 aaPredicted RBP27.48■■□□□ 1.99
FANCA-228ENST00000567943 LIG4P49917 911 aa27.48■■□□□ 1.99
FANCA-228ENST00000567943 E2F4Q16254 413 aa27.48■■□□□ 1.99
FANCA-228ENST00000567943 TMEM31Q5JXX7 168 aa27.48■■□□□ 1.99
FANCA-228ENST00000567943 SLC39A4Q6P5W5 647 aa27.48■■□□□ 1.99
FANCA-228ENST00000567943 LNX1Q8TBB1 728 aaPredicted RBP27.48■■□□□ 1.99
FANCA-228ENST00000567943 STAMQ92783 540 aa27.48■■□□□ 1.99
FANCA-228ENST00000567943 NECTIN4Q96NY8 510 aa27.48■■□□□ 1.99
FANCA-228ENST00000567943 SFXN1Q9H9B4 322 aa27.48■■□□□ 1.99
FANCA-228ENST00000567943 RAPGEFL1Q9UHV5 662 aa27.48■■□□□ 1.99
FANCA-228ENST00000567943 HNRNPDLO14979 420 aaKnown RBP27.47■■□□□ 1.99
FANCA-228ENST00000567943 GLUD1P00367 558 aa27.47■■□□□ 1.99
FANCA-228ENST00000567943 SPATA31D3P0C874 917 aa27.47■■□□□ 1.99
FANCA-228ENST00000567943 MYBP10242 640 aa27.47■■□□□ 1.99
FANCA-228ENST00000567943 IDEP14735 1019 aa27.47■■□□□ 1.99
FANCA-228ENST00000567943 GTF2BQ00403 316 aa27.47■■□□□ 1.99
FANCA-228ENST00000567943 ZC2HC1CQ53FD0 456 aaPredicted RBP27.47■■□□□ 1.99
FANCA-228ENST00000567943 LILRA6Q6PI73 481 aa27.47■■□□□ 1.99
FANCA-228ENST00000567943 DCLRE1AQ6PJP8 1040 aa27.47■■□□□ 1.99
FANCA-228ENST00000567943 SPATA31D4Q6ZUB0 917 aa27.47■■□□□ 1.99
FANCA-228ENST00000567943 GPR149Q86SP6 731 aa27.47■■□□□ 1.99
FANCA-228ENST00000567943 PALB2Q86YC2 1186 aa27.47■■□□□ 1.99
FANCA-228ENST00000567943 GLYCTKQ8IVS8 523 aa27.47■■□□□ 1.99
FANCA-228ENST00000567943 TMEM130Q8N3G9 435 aa27.47■■□□□ 1.99
FANCA-228ENST00000567943 PIK3R5Q8WYR1 880 aa27.47■■□□□ 1.99
FANCA-228ENST00000567943 C18orf25Q96B23 403 aaPredicted RBP27.47■■□□□ 1.99
FANCA-228ENST00000567943 TTPALQ9BTX7 342 aa27.47■■□□□ 1.99
FANCA-228ENST00000567943 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.47■■□□□ 1.99
FANCA-228ENST00000567943 TGM5O43548 720 aa27.46■■□□□ 1.99
FANCA-228ENST00000567943 B3GAT3O94766 335 aa27.46■■□□□ 1.99
FANCA-228ENST00000567943 GAP43P17677 238 aa27.46■■□□□ 1.99
FANCA-228ENST00000567943 ABCD1P33897 745 aa27.46■■□□□ 1.99
FANCA-228ENST00000567943 TNFSF9P41273 254 aa27.46■■□□□ 1.99
FANCA-228ENST00000567943 MTHFRP42898 656 aa27.46■■□□□ 1.99
FANCA-228ENST00000567943 KRT85P78386 507 aa27.46■■□□□ 1.99
FANCA-228ENST00000567943 ZBTB41Q5SVQ8 909 aa27.46■■□□□ 1.99
FANCA-228ENST00000567943 RESP18Q5W5W9 173 aa27.46■■□□□ 1.99
FANCA-228ENST00000567943 IQUBQ8NA54 791 aa27.46■■□□□ 1.99
FANCA-228ENST00000567943 RIPOR3Q96MK2 946 aa27.46■■□□□ 1.99
FANCA-228ENST00000567943 UROC1Q96N76 676 aa27.46■■□□□ 1.99
FANCA-228ENST00000567943 CLSTN3Q9BQT9 956 aa27.46■■□□□ 1.99
FANCA-228ENST00000567943 TNMDQ9H2S6 317 aa27.46■■□□□ 1.99
FANCA-228ENST00000567943 CUEDC2Q9H467 287 aa27.46■■□□□ 1.99
FANCA-228ENST00000567943 FAM13BQ9NYF5 915 aa27.46■■□□□ 1.99
FANCA-228ENST00000567943 SEL1LQ9UBV2 794 aa27.46■■□□□ 1.99
FANCA-228ENST00000567943 DOCK6Q96HP0 2047 aa27.45■■□□□ 1.99
FANCA-228ENST00000567943 ANK1P16157 1881 aa27.45■■□□□ 1.99
FANCA-228ENST00000567943 I3L4J1 428 aa27.45■■□□□ 1.98
FANCA-228ENST00000567943 ADAM12O43184 909 aa27.45■■□□□ 1.98
FANCA-228ENST00000567943 CXCL8P10145 99 aa27.45■■□□□ 1.98
FANCA-228ENST00000567943 COL9A1P20849 921 aa27.45■■□□□ 1.98
FANCA-228ENST00000567943 FGFR3P22607 806 aa27.45■■□□□ 1.98
FANCA-228ENST00000567943 ATAT1Q5SQI0 421 aa27.45■■□□□ 1.98
FANCA-228ENST00000567943 ZNF720Q7Z2F6 126 aa27.45■■□□□ 1.98
FANCA-228ENST00000567943 CEP57Q86XR8 500 aa27.45■■□□□ 1.98
FANCA-228ENST00000567943 MAP4K3Q8IVH8 894 aa27.45■■□□□ 1.98
FANCA-228ENST00000567943 LEO1Q8WVC0 666 aaPredicted RBP27.45■■□□□ 1.98
FANCA-228ENST00000567943 SPATA32Q96LK8 384 aa27.45■■□□□ 1.98
FANCA-228ENST00000567943 ST6GALNAC4Q9H4F1 302 aa27.45■■□□□ 1.98
FANCA-228ENST00000567943 MRPL44Q9H9J2 332 aaKnown RBP27.45■■□□□ 1.98
FANCA-228ENST00000567943 TBC1D7Q9P0N9 293 aa27.45■■□□□ 1.98
FANCA-228ENST00000567943 ATP6V1DQ9Y5K8 247 aa27.45■■□□□ 1.98
FANCA-228ENST00000567943 C2CD4DB7Z1M9 353 aa27.44■■□□□ 1.98
FANCA-228ENST00000567943 POLR2DO15514 142 aaKnown RBP27.44■■□□□ 1.98
FANCA-228ENST00000567943 RFPL2O75678 378 aa27.44■■□□□ 1.98
FANCA-228ENST00000567943 PAPLNO95428 1278 aa27.44■■□□□ 1.98
FANCA-228ENST00000567943 BRCC3P46736 316 aa27.44■■□□□ 1.98
FANCA-228ENST00000567943 CMASQ8NFW8 434 aaPredicted RBP27.44■■□□□ 1.98
FANCA-228ENST00000567943 LRRC27Q9C0I9 530 aa27.44■■□□□ 1.98
FANCA-228ENST00000567943 IKZF4Q9H2S9 585 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms