RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 OPLAHO14841 1288 aa13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 KRT4P19013 534 aa13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 EIF2AK2P19525 551 aaKnown RBP13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 ROR1Q01973 937 aa13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 PTK7Q13308 1070 aa13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 ZBTB41Q5SVQ8 909 aa13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 ARHGAP22Q7Z5H3 698 aa13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 YTHDF3Q7Z739 585 aaKnown RBP13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 MTDHQ86UE4 582 aaKnown RBP13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 AGAP11Q8TF27 550 aa13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 CPA5Q8WXQ8 436 aa13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 ATXN7L3BQ96GX2 97 aa13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 EIF2AK1Q9BQI3 630 aaKnown RBP13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 ARHGAP26Q9UNA1 814 aa13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 NCAPD2Q15021 1401 aa13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 SLC16A3O15427 465 aaKnown RBP13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 MYBP10242 640 aa13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 SARSP49591 514 aaKnown RBP13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 NEK2P51955 445 aa13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 PMS1P54277 932 aaKnown RBP13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 BCAR1P56945 870 aa13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 IGBP1P78318 339 aa13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 IFI35P80217 286 aaPredicted RBP13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 PRKG1Q13976 671 aa13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 TMTC4Q5T4D3 741 aa13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 BTNL9Q6UXG8 535 aa13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 RIBC1Q8N443 379 aaPredicted RBP13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 PIGBQ92521 554 aa13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 CDC42EP4Q9H3Q1 356 aaKnown RBP13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 INTS13Q9NVM9 706 aa13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 CA8P35219 290 aa13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 CCDC117Q8IWD4 279 aaPredicted RBP13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 TMA16Q96EY4 203 aaKnown RBP13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 REEP2Q9BRK0 252 aa13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 KIFC3Q9BVG8 833 aa13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 SUN2Q9UH99 717 aa13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 DENND3A2RUS2 1198 aa13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 TCN1P20061 433 aaPredicted RBP13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 DAB2P98082 770 aa13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 SNX30Q5VWJ9 437 aa13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 IZUMO2Q6UXV1 221 aa13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 CAAP1Q9H8G2 361 aa13.08□□□□□ -0.32
CSPG4P13-202ENST00000567704 UBE4BO95155 1302 aa13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 CNTNAP5Q8WYK1 1306 aa13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 EIF3EP60228 445 aaKnown RBP13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 ZNF200P98182 395 aaPredicted RBP13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 POU5F1BQ06416 359 aa13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 KLC3Q6P597 504 aa13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 C1orf228Q6PIY5 440 aa13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 WDR17Q8IZU2 1322 aa13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 MROH1Q8NDA8 1641 aa13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 GIPC2Q8TF65 315 aa13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 NACA2Q9H009 215 aa13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 ZC4H2Q9NQZ6 224 aa13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 PCMTD2Q9NV79 361 aa13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 ASNSD1Q9NWL6 643 aa13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 ETAA1Q9NY74 926 aa13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 RFC5P40937 340 aa13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 HDAC4P56524 1084 aa13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 QRICH1Q2TAL8 776 aa13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 PDXDC2PQ6P474 469 aa13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 ADGRF4Q8IZF3 695 aa13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 LARGE2Q8N3Y3 721 aa13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 TMEM237Q96Q45 408 aa13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 FOXP3Q9BZS1 431 aa13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 SCHIP1Q9P0W5 487 aaPredicted RBP13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 KLHL8Q9P2G9 620 aaPredicted RBP13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 ANGPTL3Q9Y5C1 460 aa13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 PXDNLA1KZ92 1463 aa13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 KLHL2O95198 593 aa13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 TAC1P20366 129 aa13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 FOXD4Q12950 439 aaPredicted RBP13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 MSL3Q8N5Y2 521 aaKnown RBP13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 ATG4AQ8WYN0 398 aa13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 VPS39Q96JC1 886 aa13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 CNBD2Q96M20 576 aa13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 OLFML3Q9NRN5 406 aa13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 ABCF3Q9NUQ8 709 aa13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 DDX56Q9NY93 547 aaKnown RBP13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 AXIN2Q9Y2T1 843 aa13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 DTNAQ9Y4J8 743 aa13.07□□□□□ -0.32
CSPG4P13-202ENST00000567704 E7ENQ6 273 aa13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 TRPC1P48995 793 aa13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 MRPS15P82914 257 aaKnown RBP13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 TMC3Q7Z5M5 1100 aa13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 THNSL1Q8IYQ7 743 aa13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 E2F7Q96AV8 911 aa13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 SNX25Q9H3E2 840 aa13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 NDUFA13Q9P0J0 144 aa13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 EYA4O95677 639 aa13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 PTPN4P29074 926 aa13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 YWHAHQ04917 246 aaPredicted RBP13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 LMBRD2Q68DH5 695 aaPredicted RBP13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 PPP1R18Q6NYC8 613 aa13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 ANKRD27Q96NW4 1050 aa13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 AGXT2Q9BYV1 514 aa13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 SEMA6BQ9H3T3 888 aa13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 OSGEPQ9NPF4 335 aa13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 PARVAQ9NVD7 372 aa13.06□□□□□ -0.32
CSPG4P13-202ENST00000567704 MINPP1Q9UNW1 487 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms