RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 CFHP08603 1231 aa20.38■□□□□ 0.85
LINC01238-205ENST00000567549 MYBP10242 640 aa20.38■□□□□ 0.85
LINC01238-205ENST00000567549 OR1D2P34982 312 aa20.38■□□□□ 0.85
LINC01238-205ENST00000567549 NBL1P41271 181 aa20.38■□□□□ 0.85
LINC01238-205ENST00000567549 CLCNKBP51801 687 aa20.38■□□□□ 0.85
LINC01238-205ENST00000567549 NBR1Q14596 966 aa20.38■□□□□ 0.85
LINC01238-205ENST00000567549 ECM1Q16610 540 aa20.38■□□□□ 0.85
LINC01238-205ENST00000567549 KYAT1Q16773 422 aa20.38■□□□□ 0.85
LINC01238-205ENST00000567549 UPP1Q16831 310 aa20.38■□□□□ 0.85
LINC01238-205ENST00000567549 AXDND1Q5T1B0 1012 aaPredicted RBP20.38■□□□□ 0.85
LINC01238-205ENST00000567549 SPIRE2Q8WWL2 714 aa20.38■□□□□ 0.85
LINC01238-205ENST00000567549 CDT1Q9H211 546 aa20.38■□□□□ 0.85
LINC01238-205ENST00000567549 FAM86C1Q9NVL1 165 aa20.38■□□□□ 0.85
LINC01238-205ENST00000567549 KCNH3Q9ULD8 1083 aa20.38■□□□□ 0.85
LINC01238-205ENST00000567549 NUB1Q9Y5A7 615 aa20.38■□□□□ 0.85
LINC01238-205ENST00000567549 MYH11P35749 1972 aa20.37■□□□□ 0.85
LINC01238-205ENST00000567549 ANHXE9PGG2 379 aa20.37■□□□□ 0.85
LINC01238-205ENST00000567549 SYN3O14994 580 aa20.37■□□□□ 0.85
LINC01238-205ENST00000567549 TOM1L1O75674 476 aa20.37■□□□□ 0.85
LINC01238-205ENST00000567549 TOB1P50616 345 aaPredicted RBP20.37■□□□□ 0.85
LINC01238-205ENST00000567549 ATP2C1P98194 919 aaPredicted RBP20.37■□□□□ 0.85
LINC01238-205ENST00000567549 PFKPQ01813 784 aa20.37■□□□□ 0.85
LINC01238-205ENST00000567549 GLRA4Q5JXX5 417 aa20.37■□□□□ 0.85
LINC01238-205ENST00000567549 CWF19L1Q69YN2 538 aaKnown RBP20.37■□□□□ 0.85
LINC01238-205ENST00000567549 PHLDB3Q6NSJ2 640 aa20.37■□□□□ 0.85
LINC01238-205ENST00000567549 RINT1Q6NUQ1 792 aa20.37■□□□□ 0.85
LINC01238-205ENST00000567549 GRASPQ7Z6J2 395 aaPredicted RBP20.37■□□□□ 0.85
LINC01238-205ENST00000567549 SLC7A14Q8TBB6 771 aa20.37■□□□□ 0.85
LINC01238-205ENST00000567549 AK8Q96MA6 479 aa20.37■□□□□ 0.85
LINC01238-205ENST00000567549 PHOX2BQ99453 314 aa20.37■□□□□ 0.85
LINC01238-205ENST00000567549 NTPCRQ9BSD7 190 aaKnown RBP20.37■□□□□ 0.85
LINC01238-205ENST00000567549 SLC2A4RGQ9NR83 387 aa20.37■□□□□ 0.85
LINC01238-205ENST00000567549 TRIP11Q15643 1979 aa20.36■□□□□ 0.85
LINC01238-205ENST00000567549 LRG1P02750 347 aa20.36■□□□□ 0.85
LINC01238-205ENST00000567549 PLS3P13797 630 aa20.36■□□□□ 0.85
LINC01238-205ENST00000567549 KCNE1P15382 129 aa20.36■□□□□ 0.85
LINC01238-205ENST00000567549 HTR4Q13639 388 aa20.36■□□□□ 0.85
LINC01238-205ENST00000567549 ZRSR1Q15695 479 aaKnown RBP20.36■□□□□ 0.85
LINC01238-205ENST00000567549 XKR4Q5GH76 650 aa20.36■□□□□ 0.85
LINC01238-205ENST00000567549 HYIQ5T013 277 aa20.36■□□□□ 0.85
LINC01238-205ENST00000567549 ZPBP2Q6X784 338 aa20.36■□□□□ 0.85
LINC01238-205ENST00000567549 C1orf186Q6ZWK4 172 aa20.36■□□□□ 0.85
LINC01238-205ENST00000567549 DTWD2Q8NBA8 298 aa20.36■□□□□ 0.85
LINC01238-205ENST00000567549 NKD2Q969F2 451 aaPredicted RBP20.36■□□□□ 0.85
LINC01238-205ENST00000567549 KIF2CQ99661 725 aa20.36■□□□□ 0.85
LINC01238-205ENST00000567549 SEMA4AQ9H3S1 761 aa20.36■□□□□ 0.85
LINC01238-205ENST00000567549 CACNG4Q9UBN1 327 aa20.36■□□□□ 0.85
LINC01238-205ENST00000567549 MAFFQ9ULX9 164 aa20.36■□□□□ 0.85
LINC01238-205ENST00000567549 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.36■□□□□ 0.85
LINC01238-205ENST00000567549 CDY1Q9Y6F8 540 aa20.36■□□□□ 0.85
LINC01238-205ENST00000567549 PODXLO00592 558 aa20.35■□□□□ 0.85
LINC01238-205ENST00000567549 XPOTO43592 962 aaKnown RBP20.35■□□□□ 0.85
LINC01238-205ENST00000567549 MATR3P43243 847 aaKnown RBP eCLIP20.35■□□□□ 0.85
LINC01238-205ENST00000567549 NOLC1Q14978 699 aaKnown RBP eCLIP20.35■□□□□ 0.85
LINC01238-205ENST00000567549 PABPC1LQ4VXU2 614 aaKnown RBP20.35■□□□□ 0.85
LINC01238-205ENST00000567549 ELMOD1Q8N336 334 aa20.35■□□□□ 0.85
LINC01238-205ENST00000567549 SYT2Q8N9I0 419 aaPredicted RBP20.35■□□□□ 0.85
LINC01238-205ENST00000567549 APPL2Q8NEU8 664 aa20.35■□□□□ 0.85
LINC01238-205ENST00000567549 RSAD2Q8WXG1 361 aa20.35■□□□□ 0.85
LINC01238-205ENST00000567549 CALML4Q96GE6 196 aa20.35■□□□□ 0.85
LINC01238-205ENST00000567549 SNX27Q96L92 541 aa20.35■□□□□ 0.85
LINC01238-205ENST00000567549 TSPAN18Q96SJ8 248 aa20.35■□□□□ 0.85
LINC01238-205ENST00000567549 TARS2Q9BW92 718 aaKnown RBP20.35■□□□□ 0.85
LINC01238-205ENST00000567549 OXCT2Q9BYC2 517 aaPredicted RBP20.35■□□□□ 0.85
LINC01238-205ENST00000567549 PTPRHQ9HD43 1115 aa20.35■□□□□ 0.85
LINC01238-205ENST00000567549 ARHGEF3Q9NR81 526 aa20.35■□□□□ 0.85
LINC01238-205ENST00000567549 CNTN3Q9P232 1028 aa20.35■□□□□ 0.85
LINC01238-205ENST00000567549 NUMBLQ9Y6R0 609 aa20.35■□□□□ 0.85
LINC01238-205ENST00000567549 VWA8A3KMH1 1905 aa20.35■□□□□ 0.85
LINC01238-205ENST00000567549 PRRG1O14668 218 aa20.34■□□□□ 0.85
LINC01238-205ENST00000567549 SLC16A4O15374 487 aa20.34■□□□□ 0.85
LINC01238-205ENST00000567549 CCL16O15467 120 aa20.34■□□□□ 0.85
LINC01238-205ENST00000567549 CLDN3O15551 220 aa20.34■□□□□ 0.85
LINC01238-205ENST00000567549 NARSO43776 548 aaKnown RBP20.34■□□□□ 0.85
LINC01238-205ENST00000567549 EDN1P05305 212 aa20.34■□□□□ 0.85
LINC01238-205ENST00000567549 NPR3P17342 541 aa20.34■□□□□ 0.85
LINC01238-205ENST00000567549 OSTNP61366 133 aa20.34■□□□□ 0.85
LINC01238-205ENST00000567549 C8orf34Q49A92 452 aa20.34■□□□□ 0.85
LINC01238-205ENST00000567549 ZC3H14Q6PJT7 736 aaKnown RBP20.34■□□□□ 0.85
LINC01238-205ENST00000567549 ALKAL1Q6UXT8 129 aa20.34■□□□□ 0.85
LINC01238-205ENST00000567549 ZNF461Q8TAF7 563 aa20.34■□□□□ 0.85
LINC01238-205ENST00000567549 GPR152Q8TDT2 470 aa20.34■□□□□ 0.85
LINC01238-205ENST00000567549 RUSC1Q9BVN2 902 aa20.34■□□□□ 0.85
LINC01238-205ENST00000567549 TBC1D17Q9HA65 648 aa20.34■□□□□ 0.85
LINC01238-205ENST00000567549 PLEKHA5Q9HAU0 1116 aa20.34■□□□□ 0.85
LINC01238-205ENST00000567549 ODF2LQ9ULJ1 636 aa20.34■□□□□ 0.85
LINC01238-205ENST00000567549 CA14Q9ULX7 337 aa20.34■□□□□ 0.85
LINC01238-205ENST00000567549 SMC3Q9UQE7 1217 aa20.34■□□□□ 0.85
LINC01238-205ENST00000567549 USP20Q9Y2K6 914 aa20.34■□□□□ 0.85
LINC01238-205ENST00000567549 VWA3AA6NCI4 1184 aa20.33■□□□□ 0.85
LINC01238-205ENST00000567549 PP2D1A8MPX8 630 aa20.33■□□□□ 0.85
LINC01238-205ENST00000567549 PROZP22891 400 aa20.33■□□□□ 0.85
LINC01238-205ENST00000567549 TKTP29401 623 aaKnown RBP20.33■□□□□ 0.85
LINC01238-205ENST00000567549 MARCKSP29966 332 aaPredicted RBP20.33■□□□□ 0.85
LINC01238-205ENST00000567549 ANGPT1Q15389 498 aa20.33■□□□□ 0.85
LINC01238-205ENST00000567549 TPGS2Q68CL5 300 aa20.33■□□□□ 0.85
LINC01238-205ENST00000567549 SLC8B1Q6J4K2 584 aa20.33■□□□□ 0.85
LINC01238-205ENST00000567549 ZNF280DQ6N043 979 aa20.33■□□□□ 0.85
LINC01238-205ENST00000567549 DAW1Q8N136 415 aa20.33■□□□□ 0.85
LINC01238-205ENST00000567549 RASSF8Q8NHQ8 419 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms