RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 ZBTB5O15062 677 aa6.33□□□□□ -1.4
CNOT1-211ENST00000567188 CRCPO75575 148 aa6.33□□□□□ -1.4
CNOT1-211ENST00000567188 NDUFB10O96000 172 aa6.33□□□□□ -1.4
CNOT1-211ENST00000567188 MMP1P03956 469 aa6.33□□□□□ -1.4
CNOT1-211ENST00000567188 TNFAIP3P21580 790 aa6.33□□□□□ -1.4
CNOT1-211ENST00000567188 MTMR1Q13613 665 aa6.33□□□□□ -1.4
CNOT1-211ENST00000567188 RUNDC3AQ59EK9 446 aa6.33□□□□□ -1.4
CNOT1-211ENST00000567188 WDR93Q6P2C0 686 aa6.33□□□□□ -1.4
CNOT1-211ENST00000567188 STX19Q8N4C7 294 aa6.33□□□□□ -1.4
CNOT1-211ENST00000567188 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.33□□□□□ -1.4
CNOT1-211ENST00000567188 PPP2R3CQ969Q6 453 aa6.33□□□□□ -1.4
CNOT1-211ENST00000567188 TSPAN18Q96SJ8 248 aa6.33□□□□□ -1.4
CNOT1-211ENST00000567188 ELAC2Q9BQ52 826 aaKnown RBP6.33□□□□□ -1.4
CNOT1-211ENST00000567188 TRIM56Q9BRZ2 755 aaKnown RBP6.33□□□□□ -1.4
CNOT1-211ENST00000567188 KIAA1024Q9UPX6 916 aa6.33□□□□□ -1.4
CNOT1-211ENST00000567188 IQANK1A0A1B0GTG1 560 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 ANP32DO95626 131 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 CAPN1P07384 714 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 FCGRTP55899 365 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 CAV1Q03135 178 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 CBX3Q13185 183 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 KCNB1Q14721 858 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 CHADLQ6NUI6 762 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 SWSAP1Q6NVH7 229 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 TRAF7Q6Q0C0 670 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 NEK8Q86SG6 692 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 RMDN1Q96DB5 314 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 AMNQ9BXJ7 453 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 ZWILCHQ9H900 591 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 LRWD1Q9UFC0 647 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 HPCAL4Q9UM19 191 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 HGSO14964 777 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-211ENST00000567188 SLC26A4O43511 780 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 KRT37O76014 449 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 PARNO95453 639 aaKnown RBP6.32□□□□□ -1.4
CNOT1-211ENST00000567188 NPTXRO95502 500 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 CTSHP09668 335 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 PDHBP11177 359 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 PTK2BQ14289 1009 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 MFSD14CQ5VZR4 134 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 FLCNQ8NFG4 579 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 RBM46Q8TBY0 533 aaKnown RBP6.32□□□□□ -1.4
CNOT1-211ENST00000567188 SLC38A10Q9HBR0 1119 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 RIC8AQ9NPQ8 531 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 C10orf71Q711Q0 1435 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 RASSF9O75901 435 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 WFS1O76024 890 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 TDP2O95551 362 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 NQO1P15559 274 aaKnown RBP6.32□□□□□ -1.4
CNOT1-211ENST00000567188 PSMA4P25789 261 aaKnown RBP6.32□□□□□ -1.4
CNOT1-211ENST00000567188 TTKP33981 857 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 DSG1Q02413 1049 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 PTGDRQ13258 359 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 NAA35Q5VZE5 725 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 DDX42Q86XP3 938 aaKnown RBP eCLIP6.32□□□□□ -1.4
CNOT1-211ENST00000567188 SRRM1Q8IYB3 904 aaKnown RBP6.32□□□□□ -1.4
CNOT1-211ENST00000567188 CCDC105Q8IYK2 499 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 MYOCDQ8IZQ8 938 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 NKX2-3Q8TAU0 364 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 RMDN3Q96TC7 470 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 MTRQ99707 1265 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 PITPNM3Q9BZ71 974 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 GOLGA8JA6NMD2 632 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 ASNA1O43681 348 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 UPP2O95045 317 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 XRCC5P13010 732 aaKnown RBP6.32□□□□□ -1.4
CNOT1-211ENST00000567188 ANGPT1Q15389 498 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 ARHGAP44Q17R89 818 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 MMEL1Q495T6 779 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 FSCBQ5H9T9 825 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 ATAD3BQ5T9A4 648 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 FAM117BQ6P1L5 589 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 VPS50Q96JG6 964 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 CCDC17Q96LX7 622 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 PARK7Q99497 189 aaKnown RBP6.32□□□□□ -1.4
CNOT1-211ENST00000567188 SENP1Q9P0U3 644 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 BLOC1S6Q9UL45 172 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 PCDHB13Q9Y5F0 798 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 MYH14Q7Z406 1995 aaKnown RBP6.32□□□□□ -1.4
CNOT1-211ENST00000567188 CLIC2O15247 247 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 NDUFA8P51970 172 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 ALCAMQ13740 583 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 BAATQ14032 418 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-211ENST00000567188 ARL6IP4Q66PJ3 421 aaKnown RBP6.32□□□□□ -1.4
CNOT1-211ENST00000567188 TMEM110Q86TL2 294 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 C7orf31Q8N865 590 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 SEC16BQ96JE7 1060 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 LRRC37BQ96QE4 947 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 USP28Q96RU2 1077 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 POLR3CQ9BUI4 534 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-211ENST00000567188 ZCCHC17Q9NP64 241 aaKnown RBP6.32□□□□□ -1.4
CNOT1-211ENST00000567188 SLC39A2Q9NP94 309 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 USP15Q9Y4E8 981 aaPredicted RBP6.32□□□□□ -1.4
CNOT1-211ENST00000567188 STK36Q9NRP7 1315 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 POTEMA6NI47 508 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 TMEM88BA6NKF7 163 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 PMS2P54278 862 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 RAPGEF1Q13905 1077 aa6.32□□□□□ -1.4
CNOT1-211ENST00000567188 RRP1BQ14684 758 aaKnown RBP6.32□□□□□ -1.4
CNOT1-211ENST00000567188 SLC39A14Q15043 492 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms