RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 VARS2Q5ST30 1063 aaKnown RBP17.09■□□□□ 0.33
PALB2-205ENST00000567003 CD300LGQ6UXG3 332 aa17.09■□□□□ 0.33
PALB2-205ENST00000567003 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.09■□□□□ 0.33
PALB2-205ENST00000567003 C3orf58Q8NDZ4 430 aa17.09■□□□□ 0.33
PALB2-205ENST00000567003 MTMR9Q96QG7 549 aa17.09■□□□□ 0.33
PALB2-205ENST00000567003 CCDC113Q9H0I3 377 aa17.09■□□□□ 0.33
PALB2-205ENST00000567003 HEBP1Q9NRV9 189 aa17.09■□□□□ 0.33
PALB2-205ENST00000567003 MTRRQ9UBK8 725 aa17.09■□□□□ 0.33
PALB2-205ENST00000567003 FBXO4Q9UKT5 387 aa17.09■□□□□ 0.33
PALB2-205ENST00000567003 MRPS23Q9Y3D9 190 aaKnown RBP17.09■□□□□ 0.33
PALB2-205ENST00000567003 ACACBO00763 2458 aa17.08■□□□□ 0.33
PALB2-205ENST00000567003 F5P12259 2224 aa17.08■□□□□ 0.33
PALB2-205ENST00000567003 NRG2O14511 850 aaPredicted RBP17.08■□□□□ 0.32
PALB2-205ENST00000567003 SPTLC1O15269 473 aa17.08■□□□□ 0.32
PALB2-205ENST00000567003 RHOP08100 348 aa17.08■□□□□ 0.32
PALB2-205ENST00000567003 BRCC3P46736 316 aa17.08■□□□□ 0.32
PALB2-205ENST00000567003 CLCNKBP51801 687 aa17.08■□□□□ 0.32
PALB2-205ENST00000567003 PFKPQ01813 784 aa17.08■□□□□ 0.32
PALB2-205ENST00000567003 ELAVL2Q12926 359 aaKnown RBP17.08■□□□□ 0.32
PALB2-205ENST00000567003 TANGO2Q6ICL3 276 aa17.08■□□□□ 0.32
PALB2-205ENST00000567003 CATSPER3Q86XQ3 398 aa17.08■□□□□ 0.32
PALB2-205ENST00000567003 MCPH1Q8NEM0 835 aa17.08■□□□□ 0.32
PALB2-205ENST00000567003 DDX27Q96GQ7 796 aaKnown RBP17.08■□□□□ 0.32
PALB2-205ENST00000567003 BRMS1Q9HCU9 246 aa17.08■□□□□ 0.32
PALB2-205ENST00000567003 SMG5Q9UPR3 1016 aaKnown RBP17.08■□□□□ 0.32
PALB2-205ENST00000567003 SHISA7A6NL88 538 aa17.07■□□□□ 0.32
PALB2-205ENST00000567003 JAK2O60674 1132 aa17.07■□□□□ 0.32
PALB2-205ENST00000567003 B3GAT3O94766 335 aa17.07■□□□□ 0.32
PALB2-205ENST00000567003 POU2F2P09086 479 aa17.07■□□□□ 0.32
PALB2-205ENST00000567003 GRM2Q14416 872 aa17.07■□□□□ 0.32
PALB2-205ENST00000567003 MAPK6Q16659 721 aa17.07■□□□□ 0.32
PALB2-205ENST00000567003 ZBTB41Q5SVQ8 909 aa17.07■□□□□ 0.32
PALB2-205ENST00000567003 PDXDC1Q6P996 788 aa17.07■□□□□ 0.32
PALB2-205ENST00000567003 DIS3L2Q8IYB7 885 aaKnown RBP17.07■□□□□ 0.32
PALB2-205ENST00000567003 ATRIPQ8WXE1 791 aa17.07■□□□□ 0.32
PALB2-205ENST00000567003 WASF1Q92558 559 aa17.07■□□□□ 0.32
PALB2-205ENST00000567003 TCEAL4Q96EI5 215 aa17.07■□□□□ 0.32
PALB2-205ENST00000567003 CNTNAP3BQ96NU0 1288 aa17.07■□□□□ 0.32
PALB2-205ENST00000567003 PPP1R10Q96QC0 940 aaKnown RBP17.07■□□□□ 0.32
PALB2-205ENST00000567003 CNTNAP3Q9BZ76 1288 aa17.07■□□□□ 0.32
PALB2-205ENST00000567003 OSBPL6Q9BZF3 934 aa17.07■□□□□ 0.32
PALB2-205ENST00000567003 C2orf40Q9H1Z8 148 aa17.07■□□□□ 0.32
PALB2-205ENST00000567003 KCNH3Q9ULD8 1083 aa17.07■□□□□ 0.32
PALB2-205ENST00000567003 PCDHGA2Q9Y5H1 932 aa17.07■□□□□ 0.32
PALB2-205ENST00000567003 ACKR2O00590 384 aa17.06■□□□□ 0.32
PALB2-205ENST00000567003 EPB41L2O43491 1005 aaKnown RBP17.06■□□□□ 0.32
PALB2-205ENST00000567003 UVSSAQ2YD98 709 aa17.06■□□□□ 0.32
PALB2-205ENST00000567003 NT5DC1Q5TFE4 455 aa17.06■□□□□ 0.32
PALB2-205ENST00000567003 PADI6Q6TGC4 694 aa17.06■□□□□ 0.32
PALB2-205ENST00000567003 ZBTB44Q8NCP5 570 aa17.06■□□□□ 0.32
PALB2-205ENST00000567003 DEPTORQ8TB45 409 aa17.06■□□□□ 0.32
PALB2-205ENST00000567003 CLDN23Q96B33 292 aa17.06■□□□□ 0.32
PALB2-205ENST00000567003 ADPGKQ9BRR6 497 aa17.06■□□□□ 0.32
PALB2-205ENST00000567003 ZSCAN32Q9NX65 697 aa17.06■□□□□ 0.32
PALB2-205ENST00000567003 NDRG2Q9UN36 371 aaKnown RBP17.06■□□□□ 0.32
PALB2-205ENST00000567003 KMT2BQ9UMN6 2715 aaPredicted RBP17.05■□□□□ 0.32
PALB2-205ENST00000567003 COL4A2P08572 1712 aa17.05■□□□□ 0.32
PALB2-205ENST00000567003 TMEM189-UBE2V1I3L0A0 370 aa17.05■□□□□ 0.32
PALB2-205ENST00000567003 ECI2O75521 394 aa17.05■□□□□ 0.32
PALB2-205ENST00000567003 XRCC6P12956 609 aaKnown RBP eCLIP17.05■□□□□ 0.32
PALB2-205ENST00000567003 FCARP24071 287 aa17.05■□□□□ 0.32
PALB2-205ENST00000567003 MCM7P33993 719 aa17.05■□□□□ 0.32
PALB2-205ENST00000567003 ATXN1P54253 815 aaKnown RBP17.05■□□□□ 0.32
PALB2-205ENST00000567003 ARPP19P56211 112 aa17.05■□□□□ 0.32
PALB2-205ENST00000567003 ROR1Q01973 937 aa17.05■□□□□ 0.32
PALB2-205ENST00000567003 SOX4Q06945 474 aaPredicted RBP17.05■□□□□ 0.32
PALB2-205ENST00000567003 MTAPQ13126 283 aa17.05■□□□□ 0.32
PALB2-205ENST00000567003 FZD5Q13467 585 aa17.05■□□□□ 0.32
PALB2-205ENST00000567003 CEP120Q8N960 986 aa17.05■□□□□ 0.32
PALB2-205ENST00000567003 TUFT1Q9NNX1 390 aa17.05■□□□□ 0.32
PALB2-205ENST00000567003 PRMT8Q9NR22 394 aaPredicted RBP17.05■□□□□ 0.32
PALB2-205ENST00000567003 TICRRQ7Z2Z1 1910 aa17.04■□□□□ 0.32
PALB2-205ENST00000567003 WDR27A2RRH5 827 aa17.04■□□□□ 0.32
PALB2-205ENST00000567003 ARHGEF35A5YM69 484 aa17.04■□□□□ 0.32
PALB2-205ENST00000567003 LILRB5O75023 590 aa17.04■□□□□ 0.32
PALB2-205ENST00000567003 KRT37O76014 449 aa17.04■□□□□ 0.32
PALB2-205ENST00000567003 CYP11B2P19099 503 aa17.04■□□□□ 0.32
PALB2-205ENST00000567003 MAGEA9P43362 315 aa17.04■□□□□ 0.32
PALB2-205ENST00000567003 GUCY1B3Q02153 619 aa17.04■□□□□ 0.32
PALB2-205ENST00000567003 LPAL2Q16609 132 aa17.04■□□□□ 0.32
PALB2-205ENST00000567003 ME3Q16798 604 aa17.04■□□□□ 0.32
PALB2-205ENST00000567003 UPP1Q16831 310 aa17.04■□□□□ 0.32
PALB2-205ENST00000567003 DCAF4L1Q3SXM0 396 aa17.04■□□□□ 0.32
PALB2-205ENST00000567003 NSUN7Q8NE18 718 aaKnown RBP17.04■□□□□ 0.32
PALB2-205ENST00000567003 NELL1Q92832 810 aa17.04■□□□□ 0.32
PALB2-205ENST00000567003 GTF3C6Q969F1 213 aa17.04■□□□□ 0.32
PALB2-205ENST00000567003 NACC1Q96RE7 527 aa17.04■□□□□ 0.32
PALB2-205ENST00000567003 CORO1BQ9BR76 489 aa17.04■□□□□ 0.32
PALB2-205ENST00000567003 EPC1Q9H2F5 836 aa17.04■□□□□ 0.32
PALB2-205ENST00000567003 PARD6AQ9NPB6 346 aa17.04■□□□□ 0.32
PALB2-205ENST00000567003 USP18Q9UMW8 372 aa17.04■□□□□ 0.32
PALB2-205ENST00000567003 BACE2Q9Y5Z0 518 aa17.04■□□□□ 0.32
PALB2-205ENST00000567003 CHD8Q9HCK8 2581 aa17.03■□□□□ 0.32
PALB2-205ENST00000567003 LRG1P02750 347 aa17.03■□□□□ 0.32
PALB2-205ENST00000567003 CCR2P41597 374 aa17.03■□□□□ 0.32
PALB2-205ENST00000567003 NAMPTP43490 491 aa17.03■□□□□ 0.32
PALB2-205ENST00000567003 RBM25P49756 843 aaKnown RBP17.03■□□□□ 0.32
PALB2-205ENST00000567003 OSTNP61366 133 aa17.03■□□□□ 0.32
PALB2-205ENST00000567003 FAM78AQ5JUQ0 283 aa17.03■□□□□ 0.32
PALB2-205ENST00000567003 PRSS36Q5K4E3 855 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms