RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 FECHP22830 423 aa12.32□□□□□ -0.44
CDH1-210ENST00000566612 JAG1P78504 1218 aa12.32□□□□□ -0.44
CDH1-210ENST00000566612 ZNF662Q6ZS27 426 aa12.32□□□□□ -0.44
CDH1-210ENST00000566612 SCYL3Q8IZE3 742 aa12.32□□□□□ -0.44
CDH1-210ENST00000566612 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.32□□□□□ -0.44
CDH1-210ENST00000566612 RBM41Q96IZ5 413 aaKnown RBP12.32□□□□□ -0.44
CDH1-210ENST00000566612 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.32□□□□□ -0.44
CDH1-210ENST00000566612 HEY1Q9Y5J3 304 aa12.32□□□□□ -0.44
CDH1-210ENST00000566612 RALAP11233 206 aa12.32□□□□□ -0.44
CDH1-210ENST00000566612 CHN1P15882 459 aa12.32□□□□□ -0.44
CDH1-210ENST00000566612 ATP11AP98196 1134 aa12.32□□□□□ -0.44
CDH1-210ENST00000566612 R3HDM1Q15032 1099 aaKnown RBP12.32□□□□□ -0.44
CDH1-210ENST00000566612 ANKRD20A3Q5VUR7 823 aa12.32□□□□□ -0.44
CDH1-210ENST00000566612 FBXW10Q5XX13 1052 aa12.32□□□□□ -0.44
CDH1-210ENST00000566612 ACAD10Q6JQN1 1059 aa12.32□□□□□ -0.44
CDH1-210ENST00000566612 BTNL9Q6UXG8 535 aa12.32□□□□□ -0.44
CDH1-210ENST00000566612 MAP7D3Q8IWC1 876 aa12.32□□□□□ -0.44
CDH1-210ENST00000566612 ATL2Q8NHH9 583 aa12.32□□□□□ -0.44
CDH1-210ENST00000566612 ATP8B4Q8TF62 1192 aa12.32□□□□□ -0.44
CDH1-210ENST00000566612 SEPT1Q8WYJ6 367 aa12.32□□□□□ -0.44
CDH1-210ENST00000566612 CHMP6Q96FZ7 201 aa12.32□□□□□ -0.44
CDH1-210ENST00000566612 SNF8Q96H20 258 aa12.32□□□□□ -0.44
CDH1-210ENST00000566612 MCEEQ96PE7 176 aa12.32□□□□□ -0.44
CDH1-210ENST00000566612 GINM1Q9NU53 330 aa12.32□□□□□ -0.44
CDH1-210ENST00000566612 C19orf81C9J6K1 198 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 VWA5AO00534 786 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 MUTP22033 750 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 OSBPP22059 807 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 COILP38432 576 aaPredicted RBP12.31□□□□□ -0.44
CDH1-210ENST00000566612 SNX16P57768 344 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 BYSLQ13895 437 aaKnown RBP12.31□□□□□ -0.44
CDH1-210ENST00000566612 NOP9Q86U38 636 aaKnown RBP12.31□□□□□ -0.44
CDH1-210ENST00000566612 CAVIN3Q969G5 261 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 TSNARE1Q96NA8 513 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 OSBPL8Q9BZF1 889 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 PARVAQ9NVD7 372 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 MAGED2Q9UNF1 606 aaPredicted RBP12.31□□□□□ -0.44
CDH1-210ENST00000566612 MARF1Q9Y4F3 1742 aaKnown RBP12.31□□□□□ -0.44
CDH1-210ENST00000566612 ROBO1Q9Y6N7 1651 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 MAFGO15525 162 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 EXTL3O43909 919 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 PRPSAP2O60256 369 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 CALB1P05937 261 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 INHBAP08476 426 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 TXNP10599 105 aaKnown RBP12.31□□□□□ -0.44
CDH1-210ENST00000566612 PRKCIP41743 596 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 ARSEP51690 589 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 FKBP1AP62942 108 aaKnown RBP12.31□□□□□ -0.44
CDH1-210ENST00000566612 FAM47CQ5HY64 1035 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 NME8Q8N427 588 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 KLHL29Q96CT2 875 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 GPRASP2Q96D09 838 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 ZBTB45Q96K62 511 aaPredicted RBP12.31□□□□□ -0.44
CDH1-210ENST00000566612 PRMT1Q99873 361 aaKnown RBP12.31□□□□□ -0.44
CDH1-210ENST00000566612 KIAA1683Q9H0B3 1180 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 COL18A1P39060 1754 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 CAPN9O14815 690 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 SPAG7O75391 227 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 CSDE1O75534 798 aaKnown RBP12.31□□□□□ -0.44
CDH1-210ENST00000566612 PYGMP11217 842 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 GTF2H1P32780 548 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 MSH2P43246 934 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 ORC1Q13415 861 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 NAA25Q14CX7 972 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 SURF1Q15526 300 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 C6orf163Q5TEZ5 329 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 LRIG3Q6UXM1 1119 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 CENPUQ71F23 418 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 ZBED8Q8IZ13 594 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 PARD3BQ8TEW8 1205 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 MED10Q9BTT4 135 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 IP6K2Q9UHH9 426 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 LCMT1Q9UIC8 334 aa12.31□□□□□ -0.44
CDH1-210ENST00000566612 A0A0A6YYK5 440 aaPredicted RBP12.3□□□□□ -0.44
CDH1-210ENST00000566612 CAND2O75155 1236 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 IFRD2Q12894 506 aaPredicted RBP12.3□□□□□ -0.44
CDH1-210ENST00000566612 RRP1BQ14684 758 aaKnown RBP12.3□□□□□ -0.44
CDH1-210ENST00000566612 SMTNL2Q2TAL5 461 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 LGSNQ5TDP6 509 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 PDIK1LQ8N165 341 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 OR6B3Q8NGW1 331 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 CCDC110Q8TBZ0 833 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 FAM167AQ96KS9 214 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 BRD2P25440 801 aaKnown RBP12.3□□□□□ -0.44
CDH1-210ENST00000566612 AARSP49588 968 aaKnown RBP eCLIP12.3□□□□□ -0.44
CDH1-210ENST00000566612 CNTN2Q02246 1040 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 ITGB3BPQ13352 177 aaPredicted RBP12.3□□□□□ -0.44
CDH1-210ENST00000566612 PTGISQ16647 500 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 ZC3H18Q86VM9 953 aaKnown RBP12.3□□□□□ -0.44
CDH1-210ENST00000566612 TRIM50Q86XT4 487 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 ANKMY2Q8IV38 441 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 SLC10A4Q96EP9 437 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 INPP4AQ96PE3 977 aaPredicted RBP12.3□□□□□ -0.44
CDH1-210ENST00000566612 SEMA4AQ9H3S1 761 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 A6NJR5 290 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 M0QYV0 167 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 MEFVO15553 781 aaPredicted RBP12.3□□□□□ -0.44
CDH1-210ENST00000566612 OATP04181 439 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 PGK2P07205 417 aa12.3□□□□□ -0.44
CDH1-210ENST00000566612 TROVE2P10155 538 aaKnown RBP eCLIP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms