RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 ATP4AP20648 1035 aa14.32□□□□□ -0.12
LINC00563-201ENST00000566370 MAPK4P31152 587 aa14.32□□□□□ -0.12
LINC00563-201ENST00000566370 CTNNA1P35221 906 aaKnown RBP14.32□□□□□ -0.12
LINC00563-201ENST00000566370 ACTN2P35609 894 aa14.32□□□□□ -0.12
LINC00563-201ENST00000566370 CDR1P51861 262 aa14.32□□□□□ -0.12
LINC00563-201ENST00000566370 NLRP11P59045 1033 aaKnown RBP14.32□□□□□ -0.12
LINC00563-201ENST00000566370 SNAPC2Q13487 334 aa14.32□□□□□ -0.12
LINC00563-201ENST00000566370 CUL2Q13617 745 aa14.32□□□□□ -0.12
LINC00563-201ENST00000566370 CAPSQ13938 189 aa14.32□□□□□ -0.12
LINC00563-201ENST00000566370 PTPROQ16827 1216 aa14.32□□□□□ -0.12
LINC00563-201ENST00000566370 CELF3Q5SZQ8 465 aaKnown RBP14.32□□□□□ -0.12
LINC00563-201ENST00000566370 WDR78Q5VTH9 848 aa14.32□□□□□ -0.12
LINC00563-201ENST00000566370 RUFY4Q6ZNE9 571 aa14.32□□□□□ -0.12
LINC00563-201ENST00000566370 CROCCP2Q86T23 111 aa14.32□□□□□ -0.12
LINC00563-201ENST00000566370 DNAAF5Q86Y56 855 aa14.32□□□□□ -0.12
LINC00563-201ENST00000566370 PALB2Q86YC2 1186 aa14.32□□□□□ -0.12
LINC00563-201ENST00000566370 BRSK2Q8IWQ3 736 aa14.32□□□□□ -0.12
LINC00563-201ENST00000566370 CD302Q8IX05 232 aa14.32□□□□□ -0.12
LINC00563-201ENST00000566370 C1orf131Q8NDD1 294 aaKnown RBP14.32□□□□□ -0.12
LINC00563-201ENST00000566370 VCPIP1Q96JH7 1222 aa14.32□□□□□ -0.12
LINC00563-201ENST00000566370 PCDHB18PQ96TA0 734 aa14.32□□□□□ -0.12
LINC00563-201ENST00000566370 SH3GL2Q99962 352 aa14.32□□□□□ -0.12
LINC00563-201ENST00000566370 TARS2Q9BW92 718 aaKnown RBP14.32□□□□□ -0.12
LINC00563-201ENST00000566370 COG5Q9UP83 839 aa14.32□□□□□ -0.12
LINC00563-201ENST00000566370 TRPC6Q9Y210 931 aa14.32□□□□□ -0.12
LINC00563-201ENST00000566370 PCDHB4Q9Y5E5 795 aa14.32□□□□□ -0.12
LINC00563-201ENST00000566370 OGTO15294 1046 aa14.31□□□□□ -0.12
LINC00563-201ENST00000566370 HBP1O60381 514 aa14.31□□□□□ -0.12
LINC00563-201ENST00000566370 PRKCBP05771 671 aa14.31□□□□□ -0.12
LINC00563-201ENST00000566370 ZBTB48P10074 688 aaPredicted RBP14.31□□□□□ -0.12
LINC00563-201ENST00000566370 COMTP21964 271 aa14.31□□□□□ -0.12
LINC00563-201ENST00000566370 ACOT2P49753 483 aa14.31□□□□□ -0.12
LINC00563-201ENST00000566370 GUCY2FP51841 1108 aa14.31□□□□□ -0.12
LINC00563-201ENST00000566370 MRPS25P82663 173 aaKnown RBP14.31□□□□□ -0.12
LINC00563-201ENST00000566370 TRPC3Q13507 836 aa14.31□□□□□ -0.12
LINC00563-201ENST00000566370 ARFGAP2Q8N6H7 521 aa14.31□□□□□ -0.12
LINC00563-201ENST00000566370 TATDN2Q93075 761 aa14.31□□□□□ -0.12
LINC00563-201ENST00000566370 SPATA33Q96N06 139 aa14.31□□□□□ -0.12
LINC00563-201ENST00000566370 MTRF1LQ9UGC7 380 aaKnown RBP14.31□□□□□ -0.12
LINC00563-201ENST00000566370 PCDHA3Q9Y5H8 950 aa14.31□□□□□ -0.12
LINC00563-201ENST00000566370 ESYT3A0FGR9 886 aa14.3□□□□□ -0.12
LINC00563-201ENST00000566370 HMGB1P1B2RPK0 211 aaPredicted RBP14.3□□□□□ -0.12
LINC00563-201ENST00000566370 TNNC2P02585 160 aa14.3□□□□□ -0.12
LINC00563-201ENST00000566370 CLTAP09496 248 aa14.3□□□□□ -0.12
LINC00563-201ENST00000566370 GNA15P30679 374 aa14.3□□□□□ -0.12
LINC00563-201ENST00000566370 ERVK-9P63128 1117 aa14.3□□□□□ -0.12
LINC00563-201ENST00000566370 KYAT1Q16773 422 aa14.3□□□□□ -0.12
LINC00563-201ENST00000566370 TDRD10Q5VZ19 366 aaKnown RBP14.3□□□□□ -0.12
LINC00563-201ENST00000566370 CDCA2Q69YH5 1023 aaPredicted RBP14.3□□□□□ -0.12
LINC00563-201ENST00000566370 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.3□□□□□ -0.12
LINC00563-201ENST00000566370 PRPF31Q8WWY3 499 aaKnown RBP14.3□□□□□ -0.12
LINC00563-201ENST00000566370 PCYT2Q99447 389 aa14.3□□□□□ -0.12
LINC00563-201ENST00000566370 GPR20Q99678 358 aa14.3□□□□□ -0.12
LINC00563-201ENST00000566370 HINFPQ9BQA5 517 aa14.3□□□□□ -0.12
LINC00563-201ENST00000566370 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.3□□□□□ -0.12
LINC00563-201ENST00000566370 AMACRQ9UHK6 382 aa14.3□□□□□ -0.12
LINC00563-201ENST00000566370 FEZ2Q9UHY8 353 aaPredicted RBP14.3□□□□□ -0.12
LINC00563-201ENST00000566370 CEP83Q9Y592 693 aa14.3□□□□□ -0.12
LINC00563-201ENST00000566370 PASKQ96RG2 1323 aa14.29□□□□□ -0.12
LINC00563-201ENST00000566370 ZC3H4Q9UPT8 1303 aaKnown RBP14.29□□□□□ -0.12
LINC00563-201ENST00000566370 IQCA1LA6NCM1 817 aa14.29□□□□□ -0.12
LINC00563-201ENST00000566370 MYO1FO00160 1098 aa14.29□□□□□ -0.12
LINC00563-201ENST00000566370 TTI1O43156 1089 aa14.29□□□□□ -0.12
LINC00563-201ENST00000566370 CNMDO75829 334 aa14.29□□□□□ -0.12
LINC00563-201ENST00000566370 IL18RAPO95256 599 aa14.29□□□□□ -0.12
LINC00563-201ENST00000566370 TMEM191BP0C7N4 346 aa14.29□□□□□ -0.12
LINC00563-201ENST00000566370 TXNP10599 105 aaKnown RBP14.29□□□□□ -0.12
LINC00563-201ENST00000566370 HARSP12081 509 aaKnown RBP14.29□□□□□ -0.12
LINC00563-201ENST00000566370 DRG2P55039 364 aaKnown RBP14.29□□□□□ -0.12
LINC00563-201ENST00000566370 EIF3BP55884 814 aaKnown RBP14.29□□□□□ -0.12
LINC00563-201ENST00000566370 NOP14P78316 857 aaKnown RBP14.29□□□□□ -0.12
LINC00563-201ENST00000566370 TNFAIP2Q03169 654 aa14.29□□□□□ -0.12
LINC00563-201ENST00000566370 CENPCQ03188 943 aa14.29□□□□□ -0.12
LINC00563-201ENST00000566370 LAMTOR4Q0VGL1 99 aa14.29□□□□□ -0.12
LINC00563-201ENST00000566370 NCOA4Q13772 614 aa14.29□□□□□ -0.12
LINC00563-201ENST00000566370 LY6KQ17RY6 165 aa14.29□□□□□ -0.12
LINC00563-201ENST00000566370 DUOXA2Q1HG44 320 aa14.29□□□□□ -0.12
LINC00563-201ENST00000566370 SGSM1Q2NKQ1 1148 aa14.29□□□□□ -0.12
LINC00563-201ENST00000566370 ZNF484Q5JVG2 852 aa14.29□□□□□ -0.12
LINC00563-201ENST00000566370 EEPD1Q7L9B9 569 aa14.29□□□□□ -0.12
LINC00563-201ENST00000566370 MCOLN2Q8IZK6 566 aa14.29□□□□□ -0.12
LINC00563-201ENST00000566370 RBBP8NLQ8NC74 664 aaPredicted RBP14.29□□□□□ -0.12
LINC00563-201ENST00000566370 GRK7Q8WTQ7 553 aa14.29□□□□□ -0.12
LINC00563-201ENST00000566370 DDX1Q92499 740 aaKnown RBP14.29□□□□□ -0.12
LINC00563-201ENST00000566370 MAGOHBQ96A72 148 aaKnown RBP14.29□□□□□ -0.12
LINC00563-201ENST00000566370 OPTNQ96CV9 577 aa14.29□□□□□ -0.12
LINC00563-201ENST00000566370 ANKRD36BP1Q96IX9 119 aa14.29□□□□□ -0.12
LINC00563-201ENST00000566370 L3MBTL3Q96JM7 780 aaPredicted RBP14.29□□□□□ -0.12
LINC00563-201ENST00000566370 ZIM3Q96PE6 472 aa14.29□□□□□ -0.12
LINC00563-201ENST00000566370 ERP44Q9BS26 406 aa14.29□□□□□ -0.12
LINC00563-201ENST00000566370 PI4K2AQ9BTU6 479 aa14.29□□□□□ -0.12
LINC00563-201ENST00000566370 HOMER3Q9NSC5 361 aa14.29□□□□□ -0.12
LINC00563-201ENST00000566370 ANAPC7Q9UJX3 599 aa14.29□□□□□ -0.12
LINC00563-201ENST00000566370 ADGRA2Q96PE1 1338 aa14.28□□□□□ -0.12
LINC00563-201ENST00000566370 DNAJC25-GNG10A0A024R161 153 aa14.28□□□□□ -0.12
LINC00563-201ENST00000566370 AGPSO00116 658 aa14.28□□□□□ -0.12
LINC00563-201ENST00000566370 THAP12O43422 761 aa14.28□□□□□ -0.12
LINC00563-201ENST00000566370 RPS6KA5O75582 802 aa14.28□□□□□ -0.12
LINC00563-201ENST00000566370 LSM8O95777 96 aaKnown RBP14.28□□□□□ -0.12
LINC00563-201ENST00000566370 MYZAPP0CAP1 466 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms