RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 CGRRF1Q99675 332 aa8.43□□□□□ -1.06
CDH1-208ENST00000565810 ZBED2Q9BTP6 218 aa8.43□□□□□ -1.06
CDH1-208ENST00000565810 MRPL9Q9BYD2 267 aaKnown RBP8.43□□□□□ -1.06
CDH1-208ENST00000565810 TMEM117Q9H0C3 514 aa8.43□□□□□ -1.06
CDH1-208ENST00000565810 VPS16Q9H269 839 aa8.43□□□□□ -1.06
CDH1-208ENST00000565810 MMRN2Q9H8L6 949 aa8.43□□□□□ -1.06
CDH1-208ENST00000565810 INTS13Q9NVM9 706 aa8.43□□□□□ -1.06
CDH1-208ENST00000565810 TAB2Q9NYJ8 693 aa8.43□□□□□ -1.06
CDH1-208ENST00000565810 CNTN3Q9P232 1028 aa8.43□□□□□ -1.06
CDH1-208ENST00000565810 UBQLN1Q9UMX0 589 aaKnown RBP8.43□□□□□ -1.06
CDH1-208ENST00000565810 SMIM28A0A1B0GU29 152 aa8.42□□□□□ -1.06
CDH1-208ENST00000565810 LRRIQ3A6PVS8 624 aaPredicted RBP8.42□□□□□ -1.06
CDH1-208ENST00000565810 TBKBP1A7MCY6 615 aa8.42□□□□□ -1.06
CDH1-208ENST00000565810 MEIS3P2A8K0S8 358 aa8.42□□□□□ -1.06
CDH1-208ENST00000565810 P4HA2O15460 535 aa8.42□□□□□ -1.06
CDH1-208ENST00000565810 CLSTN1O94985 981 aa8.42□□□□□ -1.06
CDH1-208ENST00000565810 POMCP01189 267 aa8.42□□□□□ -1.06
CDH1-208ENST00000565810 TRIM49P0CI25 452 aa8.42□□□□□ -1.06
CDH1-208ENST00000565810 TRIM49CP0CI26 452 aa8.42□□□□□ -1.06
CDH1-208ENST00000565810 CYP3A5P20815 502 aa8.42□□□□□ -1.06
CDH1-208ENST00000565810 GCLMP48507 274 aa8.42□□□□□ -1.06
CDH1-208ENST00000565810 MXI1P50539 228 aa8.42□□□□□ -1.06
CDH1-208ENST00000565810 SCNN1GP51170 649 aa8.42□□□□□ -1.06
CDH1-208ENST00000565810 EPHB4P54760 987 aa8.42□□□□□ -1.06
CDH1-208ENST00000565810 UBASH3AP57075 661 aa8.42□□□□□ -1.06
CDH1-208ENST00000565810 CLDN10P78369 228 aa8.42□□□□□ -1.06
CDH1-208ENST00000565810 RNASELQ05823 741 aaKnown RBP8.42□□□□□ -1.06
CDH1-208ENST00000565810 GRIK3Q13003 919 aa8.42□□□□□ -1.06
CDH1-208ENST00000565810 TRPC3Q13507 836 aa8.42□□□□□ -1.06
CDH1-208ENST00000565810 GSE1Q14687 1217 aa8.42□□□□□ -1.06
CDH1-208ENST00000565810 GLRA4Q5JXX5 417 aa8.42□□□□□ -1.06
CDH1-208ENST00000565810 KRT39Q6A163 491 aa8.42□□□□□ -1.06
CDH1-208ENST00000565810 FAM117BQ6P1L5 589 aa8.42□□□□□ -1.06
CDH1-208ENST00000565810 CCDC150Q8NCX0 1101 aa8.42□□□□□ -1.06
CDH1-208ENST00000565810 SLC35C1Q96A29 364 aa8.42□□□□□ -1.06
CDH1-208ENST00000565810 ZFP42Q96MM3 310 aa8.42□□□□□ -1.06
CDH1-208ENST00000565810 SLC9A7Q96T83 725 aa8.42□□□□□ -1.06
CDH1-208ENST00000565810 YME1L1Q96TA2 773 aa8.42□□□□□ -1.06
CDH1-208ENST00000565810 POP1Q99575 1024 aaKnown RBP8.42□□□□□ -1.06
CDH1-208ENST00000565810 UBE2OQ9C0C9 1292 aaKnown RBP8.42□□□□□ -1.06
CDH1-208ENST00000565810 HSD3B7Q9H2F3 369 aa8.42□□□□□ -1.06
CDH1-208ENST00000565810 NDST4Q9H3R1 872 aa8.42□□□□□ -1.06
CDH1-208ENST00000565810 TMEM8AQ9HCN3 771 aa8.42□□□□□ -1.06
CDH1-208ENST00000565810 CARNS1A5YM72 827 aa8.41□□□□□ -1.06
CDH1-208ENST00000565810 H0YGN5 161 aa8.41□□□□□ -1.06
CDH1-208ENST00000565810 INPPL1O15357 1258 aa8.41□□□□□ -1.06
CDH1-208ENST00000565810 DGKIO75912 1065 aa8.41□□□□□ -1.06
CDH1-208ENST00000565810 C4BPAP04003 597 aaKnown RBP8.41□□□□□ -1.06
CDH1-208ENST00000565810 NFICP08651 508 aa8.41□□□□□ -1.06
CDH1-208ENST00000565810 KRT19P08727 400 aa8.41□□□□□ -1.06
CDH1-208ENST00000565810 FGFR1P11362 822 aa8.41□□□□□ -1.06
CDH1-208ENST00000565810 ATP2A2P16615 1042 aaKnown RBP8.41□□□□□ -1.06
CDH1-208ENST00000565810 RPL9P32969 192 aaKnown RBP8.41□□□□□ -1.06
CDH1-208ENST00000565810 FMO5P49326 533 aa8.41□□□□□ -1.06
CDH1-208ENST00000565810 MCCD1P59942 119 aaPredicted RBP8.41□□□□□ -1.06
CDH1-208ENST00000565810 DLG4P78352 724 aa8.41□□□□□ -1.06
CDH1-208ENST00000565810 DEFB103AP81534 67 aa8.41□□□□□ -1.06
CDH1-208ENST00000565810 RBP5P82980 135 aa8.41□□□□□ -1.06
CDH1-208ENST00000565810 MYL7Q01449 175 aa8.41□□□□□ -1.06
CDH1-208ENST00000565810 MLLT1Q03111 559 aaPredicted RBP8.41□□□□□ -1.06
CDH1-208ENST00000565810 UBXN1Q04323 297 aa8.41□□□□□ -1.06
CDH1-208ENST00000565810 PPP3CAQ08209 521 aa8.41□□□□□ -1.06
CDH1-208ENST00000565810 WDR44Q5JSH3 913 aa8.41□□□□□ -1.06
CDH1-208ENST00000565810 CLLU1OSQ5K130 101 aa8.41□□□□□ -1.06
CDH1-208ENST00000565810 SPOUT1Q5T280 376 aaKnown RBP8.41□□□□□ -1.06
CDH1-208ENST00000565810 LMBRD2Q68DH5 695 aaPredicted RBP8.41□□□□□ -1.06
CDH1-208ENST00000565810 GBP6Q6ZN66 633 aa8.41□□□□□ -1.06
CDH1-208ENST00000565810 SV2AQ7L0J3 742 aa8.41□□□□□ -1.06
CDH1-208ENST00000565810 TRAPPC11Q7Z392 1133 aa8.41□□□□□ -1.06
CDH1-208ENST00000565810 EFCAB13Q8IY85 973 aa8.41□□□□□ -1.06
CDH1-208ENST00000565810 LRRC43Q8N309 656 aa8.41□□□□□ -1.06
CDH1-208ENST00000565810 OR5B17Q8NGF7 314 aa8.41□□□□□ -1.06
CDH1-208ENST00000565810 PLEKHO2Q8TD55 490 aa8.41□□□□□ -1.06
CDH1-208ENST00000565810 ANP32BQ92688 251 aaKnown RBP8.41□□□□□ -1.06
CDH1-208ENST00000565810 DDX27Q96GQ7 796 aaKnown RBP8.41□□□□□ -1.06
CDH1-208ENST00000565810 RNPC3Q96LT9 517 aaKnown RBP8.41□□□□□ -1.06
CDH1-208ENST00000565810 PCMTD1Q96MG8 357 aaPredicted RBP8.41□□□□□ -1.06
CDH1-208ENST00000565810 ZMAT2Q96NC0 199 aaKnown RBP8.41□□□□□ -1.06
CDH1-208ENST00000565810 CASD1Q96PB1 797 aa8.41□□□□□ -1.06
CDH1-208ENST00000565810 IMPG2Q9BZV3 1241 aa8.41□□□□□ -1.06
CDH1-208ENST00000565810 TRIM5Q9C035 493 aa8.41□□□□□ -1.06
CDH1-208ENST00000565810 MTMR12Q9C0I1 747 aa8.41□□□□□ -1.06
CDH1-208ENST00000565810 DPP3Q9NY33 737 aa8.41□□□□□ -1.06
CDH1-208ENST00000565810 IFNKQ9P0W0 207 aa8.41□□□□□ -1.06
CDH1-208ENST00000565810 PCDH10Q9P2E7 1040 aa8.41□□□□□ -1.06
CDH1-208ENST00000565810 ITGA11Q9UKX5 1188 aa8.41□□□□□ -1.06
CDH1-208ENST00000565810 INSL6Q9Y581 213 aa8.41□□□□□ -1.06
CDH1-208ENST00000565810 A0A1B0GTH6 734 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 GTPBP10A4D1E9 387 aaKnown RBP8.4□□□□□ -1.06
CDH1-208ENST00000565810 LGALS16A8MUM7 142 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 RBAK-RBAKDNI3L0D1 243 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 PTGESO14684 152 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 PMM2O15305 246 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 TLL1O43897 1013 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 GJB5O95377 273 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 ALDH2P05091 517 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 PNPLA4P41247 253 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 PIK3CAP42336 1068 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 MRE11P49959 708 aa8.4□□□□□ -1.06
CDH1-208ENST00000565810 WNT7BP56706 349 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms