RNA–Protein interactions for RNA: ENST00000565582.5

FANCA-218, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-218ENST00000565582 CYP26C1Q6V0L0 522 aa13.09□□□□□ -0.31
FANCA-218ENST00000565582 C18orf25Q96B23 403 aaPredicted RBP13.09□□□□□ -0.31
FANCA-218ENST00000565582 DDX27Q96GQ7 796 aaKnown RBP13.09□□□□□ -0.31
FANCA-218ENST00000565582 ZBTB45Q96K62 511 aaPredicted RBP13.09□□□□□ -0.31
FANCA-218ENST00000565582 SNX27Q96L92 541 aa13.09□□□□□ -0.31
FANCA-218ENST00000565582 ZMAT2Q96NC0 199 aaKnown RBP13.09□□□□□ -0.31
FANCA-218ENST00000565582 CCDC94Q9BW85 323 aaPredicted RBP13.09□□□□□ -0.31
FANCA-218ENST00000565582 PTPRHQ9HD43 1115 aa13.09□□□□□ -0.31
FANCA-218ENST00000565582 HCFC1R1Q9NWW0 138 aa13.09□□□□□ -0.31
FANCA-218ENST00000565582 IGSF9Q9P2J2 1179 aa13.09□□□□□ -0.31
FANCA-218ENST00000565582 KIF3AQ9Y496 699 aa13.09□□□□□ -0.31
FANCA-218ENST00000565582 STK24Q9Y6E0 443 aa13.09□□□□□ -0.31
FANCA-218ENST00000565582 CDY1Q9Y6F8 540 aa13.09□□□□□ -0.31
FANCA-218ENST00000565582 TRIP11Q15643 1979 aa13.09□□□□□ -0.31
FANCA-218ENST00000565582 DMDP11532 3685 aa13.08□□□□□ -0.32
FANCA-218ENST00000565582 KRBA1A5PL33 1030 aa13.08□□□□□ -0.32
FANCA-218ENST00000565582 TMEM189-UBE2V1I3L0A0 370 aa13.08□□□□□ -0.32
FANCA-218ENST00000565582 LAMP2P13473 410 aa13.08□□□□□ -0.32
FANCA-218ENST00000565582 FSHRP23945 695 aa13.08□□□□□ -0.32
FANCA-218ENST00000565582 YARSP54577 528 aaKnown RBP13.08□□□□□ -0.32
FANCA-218ENST00000565582 HTR4Q13639 388 aa13.08□□□□□ -0.32
FANCA-218ENST00000565582 RILPL1Q5EBL4 403 aa13.08□□□□□ -0.32
FANCA-218ENST00000565582 MPZL3Q6UWV2 235 aa13.08□□□□□ -0.32
FANCA-218ENST00000565582 APBB1IPQ7Z5R6 666 aaPredicted RBP13.08□□□□□ -0.32
FANCA-218ENST00000565582 SLC44A3Q8N4M1 653 aa13.08□□□□□ -0.32
FANCA-218ENST00000565582 TCHPQ9BT92 498 aa13.08□□□□□ -0.32
FANCA-218ENST00000565582 TMEM134Q9H6X4 195 aa13.08□□□□□ -0.32
FANCA-218ENST00000565582 TOPORSQ9NS56 1045 aaPredicted RBP13.08□□□□□ -0.32
FANCA-218ENST00000565582 MTRRQ9UBK8 725 aa13.08□□□□□ -0.32
FANCA-218ENST00000565582 NUMBLQ9Y6R0 609 aa13.08□□□□□ -0.32
FANCA-218ENST00000565582 DOCK6Q96HP0 2047 aa13.07□□□□□ -0.32
FANCA-218ENST00000565582 PODXLO00592 558 aa13.07□□□□□ -0.32
FANCA-218ENST00000565582 GFRA3O60609 400 aa13.07□□□□□ -0.32
FANCA-218ENST00000565582 C1RP00736 705 aa13.07□□□□□ -0.32
FANCA-218ENST00000565582 PLA2G4BP0C869 781 aa13.07□□□□□ -0.32
FANCA-218ENST00000565582 MCF2P10911 925 aa13.07□□□□□ -0.32
FANCA-218ENST00000565582 AOC1P19801 751 aa13.07□□□□□ -0.32
FANCA-218ENST00000565582 PROZP22891 400 aa13.07□□□□□ -0.32
FANCA-218ENST00000565582 GUCY2CP25092 1073 aa13.07□□□□□ -0.32
FANCA-218ENST00000565582 CLCN5P51795 746 aa13.07□□□□□ -0.32
FANCA-218ENST00000565582 SLC12A3P55017 1021 aa13.07□□□□□ -0.32
FANCA-218ENST00000565582 RAB33AQ14088 237 aa13.07□□□□□ -0.32
FANCA-218ENST00000565582 TMEM119Q4V9L6 283 aa13.07□□□□□ -0.32
FANCA-218ENST00000565582 XKR4Q5GH76 650 aa13.07□□□□□ -0.32
FANCA-218ENST00000565582 AXDND1Q5T1B0 1012 aaPredicted RBP13.07□□□□□ -0.32
FANCA-218ENST00000565582 DCLRE1AQ6PJP8 1040 aa13.07□□□□□ -0.32
FANCA-218ENST00000565582 TMEM161BQ8NDZ6 487 aa13.07□□□□□ -0.32
FANCA-218ENST00000565582 ITFG1Q8TB96 612 aa13.07□□□□□ -0.32
FANCA-218ENST00000565582 GPR152Q8TDT2 470 aa13.07□□□□□ -0.32
FANCA-218ENST00000565582 LRRC15Q8TF66 581 aa13.07□□□□□ -0.32
FANCA-218ENST00000565582 ING5Q8WYH8 240 aa13.07□□□□□ -0.32
FANCA-218ENST00000565582 FGF14Q92915 247 aa13.07□□□□□ -0.32
FANCA-218ENST00000565582 CDK5RAP3Q96JB5 506 aa13.07□□□□□ -0.32
FANCA-218ENST00000565582 UROC1Q96N76 676 aa13.07□□□□□ -0.32
FANCA-218ENST00000565582 RPP25Q9BUL9 199 aaKnown RBP13.07□□□□□ -0.32
FANCA-218ENST00000565582 TUBGCP4Q9UGJ1 667 aa13.07□□□□□ -0.32
FANCA-218ENST00000565582 CFAP54Q96N23 3096 aa13.07□□□□□ -0.32
FANCA-218ENST00000565582 ANHXE9PGG2 379 aa13.06□□□□□ -0.32
FANCA-218ENST00000565582 STK25O00506 426 aa13.06□□□□□ -0.32
FANCA-218ENST00000565582 HNRNPA1P09651 372 aaKnown RBP eCLIP13.06□□□□□ -0.32
FANCA-218ENST00000565582 MAPTP10636 758 aaKnown RBP13.06□□□□□ -0.32
FANCA-218ENST00000565582 SRFP11831 508 aa13.06□□□□□ -0.32
FANCA-218ENST00000565582 PLS3P13797 630 aa13.06□□□□□ -0.32
FANCA-218ENST00000565582 ARPP19P56211 112 aa13.06□□□□□ -0.32
FANCA-218ENST00000565582 GRIN1Q05586 938 aa13.06□□□□□ -0.32
FANCA-218ENST00000565582 SPAG1Q07617 926 aa13.06□□□□□ -0.32
FANCA-218ENST00000565582 STRN3Q13033 797 aa13.06□□□□□ -0.32
FANCA-218ENST00000565582 DHX8Q14562 1220 aaKnown RBP13.06□□□□□ -0.32
FANCA-218ENST00000565582 NOLC1Q14978 699 aaKnown RBP eCLIP13.06□□□□□ -0.32
FANCA-218ENST00000565582 VARS2Q5ST30 1063 aaKnown RBP13.06□□□□□ -0.32
FANCA-218ENST00000565582 HYIQ5T013 277 aa13.06□□□□□ -0.32
FANCA-218ENST00000565582 PDXDC1Q6P996 788 aa13.06□□□□□ -0.32
FANCA-218ENST00000565582 PARM1Q6UWI2 310 aa13.06□□□□□ -0.32
FANCA-218ENST00000565582 ALKAL1Q6UXT8 129 aa13.06□□□□□ -0.32
FANCA-218ENST00000565582 SYT2Q8N9I0 419 aaPredicted RBP13.06□□□□□ -0.32
FANCA-218ENST00000565582 ACAP3Q96P50 834 aa13.06□□□□□ -0.32
FANCA-218ENST00000565582 HAPLN2Q9GZV7 340 aa13.06□□□□□ -0.32
FANCA-218ENST00000565582 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.06□□□□□ -0.32
FANCA-218ENST00000565582 CNTN3Q9P232 1028 aa13.06□□□□□ -0.32
FANCA-218ENST00000565582 SMC3Q9UQE7 1217 aa13.06□□□□□ -0.32
FANCA-218ENST00000565582 RBM19Q9Y4C8 960 aaKnown RBP13.06□□□□□ -0.32
FANCA-218ENST00000565582 XYLBO75191 536 aa13.05□□□□□ -0.32
FANCA-218ENST00000565582 CXCL8P10145 99 aa13.05□□□□□ -0.32
FANCA-218ENST00000565582 KCNE1P15382 129 aa13.05□□□□□ -0.32
FANCA-218ENST00000565582 RFX1P22670 979 aa13.05□□□□□ -0.32
FANCA-218ENST00000565582 MATR3P43243 847 aaKnown RBP eCLIP13.05□□□□□ -0.32
FANCA-218ENST00000565582 NUBP1P53384 320 aa13.05□□□□□ -0.32
FANCA-218ENST00000565582 ROR1Q01973 937 aa13.05□□□□□ -0.32
FANCA-218ENST00000565582 ARSHQ5FYA8 562 aa13.05□□□□□ -0.32
FANCA-218ENST00000565582 FRMD5Q7Z6J6 570 aa13.05□□□□□ -0.32
FANCA-218ENST00000565582 CCDC105Q8IYK2 499 aa13.05□□□□□ -0.32
FANCA-218ENST00000565582 SPIRE2Q8WWL2 714 aa13.05□□□□□ -0.32
FANCA-218ENST00000565582 FGF13Q92913 245 aa13.05□□□□□ -0.32
FANCA-218ENST00000565582 KXD1Q9BQD3 176 aa13.05□□□□□ -0.32
FANCA-218ENST00000565582 REEP2Q9BRK0 252 aa13.05□□□□□ -0.32
FANCA-218ENST00000565582 TIPINQ9BVW5 301 aa13.05□□□□□ -0.32
FANCA-218ENST00000565582 TBC1D17Q9HA65 648 aa13.05□□□□□ -0.32
FANCA-218ENST00000565582 UPF2Q9HAU5 1272 aaKnown RBP13.05□□□□□ -0.32
FANCA-218ENST00000565582 ARHGEF3Q9NR81 526 aa13.05□□□□□ -0.32
FANCA-218ENST00000565582 SLC38A7Q9NVC3 462 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms