RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 ZNF334Q9HCZ1 680 aaPredicted RBP12.42□□□□□ -0.42
CAPN3-215ENST00000565559 HELZ2Q9BYK8 2649 aaKnown RBP12.42□□□□□ -0.42
CAPN3-215ENST00000565559 NBEAQ8NFP9 2946 aa12.42□□□□□ -0.42
CAPN3-215ENST00000565559 MTCL1Q9Y4B5 1905 aaKnown RBP12.41□□□□□ -0.42
CAPN3-215ENST00000565559 TOP3BO95985 862 aaKnown RBP12.41□□□□□ -0.42
CAPN3-215ENST00000565559 PSMC3P17980 439 aa12.41□□□□□ -0.42
CAPN3-215ENST00000565559 MLLT6P55198 1093 aaPredicted RBP12.41□□□□□ -0.42
CAPN3-215ENST00000565559 TARBP2Q15633 366 aaKnown RBP12.41□□□□□ -0.42
CAPN3-215ENST00000565559 DGKKQ5KSL6 1271 aa12.41□□□□□ -0.42
CAPN3-215ENST00000565559 UBXN11Q5T124 520 aa12.41□□□□□ -0.42
CAPN3-215ENST00000565559 WWC2Q6AWC2 1192 aa12.41□□□□□ -0.42
CAPN3-215ENST00000565559 PDZD3Q86UT5 571 aa12.41□□□□□ -0.42
CAPN3-215ENST00000565559 CEP57Q86XR8 500 aa12.41□□□□□ -0.42
CAPN3-215ENST00000565559 MAP4K3Q8IVH8 894 aa12.41□□□□□ -0.42
CAPN3-215ENST00000565559 TMTC2Q8N394 836 aa12.41□□□□□ -0.42
CAPN3-215ENST00000565559 FAM200AQ8TCP9 573 aa12.41□□□□□ -0.42
CAPN3-215ENST00000565559 CLSTN3Q9BQT9 956 aa12.41□□□□□ -0.42
CAPN3-215ENST00000565559 IPPQ9Y573 584 aa12.41□□□□□ -0.42
CAPN3-215ENST00000565559 GREB1Q4ZG55 1949 aa12.41□□□□□ -0.42
CAPN3-215ENST00000565559 MYH9P35579 1960 aaKnown RBP12.4□□□□□ -0.42
CAPN3-215ENST00000565559 IGKV6-21A0A0C4DH24 114 aa12.4□□□□□ -0.42
CAPN3-215ENST00000565559 SMCO2A6NFE2 343 aa12.4□□□□□ -0.42
CAPN3-215ENST00000565559 E7EWF7 191 aa12.4□□□□□ -0.42
CAPN3-215ENST00000565559 hCG_1984214I3L0E3 225 aa12.4□□□□□ -0.42
CAPN3-215ENST00000565559 ZNF263O14978 683 aa12.4□□□□□ -0.42
CAPN3-215ENST00000565559 RHOP08100 348 aa12.4□□□□□ -0.42
CAPN3-215ENST00000565559 CYP3A4P08684 503 aa12.4□□□□□ -0.42
CAPN3-215ENST00000565559 CYP21A2P08686 494 aa12.4□□□□□ -0.42
CAPN3-215ENST00000565559 RXRAP19793 462 aa12.4□□□□□ -0.42
CAPN3-215ENST00000565559 CSRP1P21291 193 aaKnown RBP12.4□□□□□ -0.42
CAPN3-215ENST00000565559 SFNP31947 248 aa12.4□□□□□ -0.42
CAPN3-215ENST00000565559 JAK3P52333 1124 aa12.4□□□□□ -0.42
CAPN3-215ENST00000565559 NCBP1Q09161 790 aaKnown RBP12.4□□□□□ -0.42
CAPN3-215ENST00000565559 NECTIN1Q15223 517 aa12.4□□□□□ -0.42
CAPN3-215ENST00000565559 XKR3Q5GH77 459 aa12.4□□□□□ -0.42
CAPN3-215ENST00000565559 TCEAL6Q6IPX3 200 aa12.4□□□□□ -0.42
CAPN3-215ENST00000565559 TMTC3Q6ZXV5 915 aa12.4□□□□□ -0.42
CAPN3-215ENST00000565559 SRGAP1Q7Z6B7 1085 aa12.4□□□□□ -0.42
CAPN3-215ENST00000565559 KBTBD6Q86V97 674 aa12.4□□□□□ -0.42
CAPN3-215ENST00000565559 KSR1Q8IVT5 923 aa12.4□□□□□ -0.42
CAPN3-215ENST00000565559 ZNF713Q8N859 430 aaPredicted RBP12.4□□□□□ -0.42
CAPN3-215ENST00000565559 SMG8Q8ND04 991 aaKnown RBP12.4□□□□□ -0.42
CAPN3-215ENST00000565559 CSGALNACT1Q8TDX6 532 aa12.4□□□□□ -0.42
CAPN3-215ENST00000565559 DEPDC1BQ8WUY9 529 aa12.4□□□□□ -0.42
CAPN3-215ENST00000565559 PIK3R5Q8WYR1 880 aa12.4□□□□□ -0.42
CAPN3-215ENST00000565559 TCEAL3Q969E4 200 aa12.4□□□□□ -0.42
CAPN3-215ENST00000565559 ZFP42Q96MM3 310 aa12.4□□□□□ -0.42
CAPN3-215ENST00000565559 NIFKQ9BYG3 293 aaKnown RBP12.4□□□□□ -0.42
CAPN3-215ENST00000565559 ANO2Q9NQ90 1003 aa12.4□□□□□ -0.42
CAPN3-215ENST00000565559 AVENQ9NQS1 362 aaPredicted RBP12.4□□□□□ -0.42
CAPN3-215ENST00000565559 PLA2G2EQ9NZK7 142 aa12.4□□□□□ -0.42
CAPN3-215ENST00000565559 RBM8AQ9Y5S9 174 aaKnown RBP12.4□□□□□ -0.42
CAPN3-215ENST00000565559 EPB41L2O43491 1005 aaKnown RBP12.39□□□□□ -0.43
CAPN3-215ENST00000565559 CHMP2AO43633 222 aa12.39□□□□□ -0.43
CAPN3-215ENST00000565559 MAFO75444 373 aaPredicted RBP12.39□□□□□ -0.43
CAPN3-215ENST00000565559 AKAP3O75969 853 aa12.39□□□□□ -0.43
CAPN3-215ENST00000565559 ERLIN2O94905 339 aa12.39□□□□□ -0.43
CAPN3-215ENST00000565559 REC8O95072 547 aa12.39□□□□□ -0.43
CAPN3-215ENST00000565559 CEBPBP17676 345 aa12.39□□□□□ -0.43
CAPN3-215ENST00000565559 PTPN2P17706 415 aa12.39□□□□□ -0.43
CAPN3-215ENST00000565559 FCARP24071 287 aa12.39□□□□□ -0.43
CAPN3-215ENST00000565559 HOXA11P31270 313 aaPredicted RBP12.39□□□□□ -0.43
CAPN3-215ENST00000565559 KPNA1P52294 538 aaPredicted RBP12.39□□□□□ -0.43
CAPN3-215ENST00000565559 ANTXR2P58335 489 aa12.39□□□□□ -0.43
CAPN3-215ENST00000565559 HSP90AA2PQ14568 343 aaPredicted RBP12.39□□□□□ -0.43
CAPN3-215ENST00000565559 UGCGQ16739 394 aa12.39□□□□□ -0.43
CAPN3-215ENST00000565559 SLC5A9Q2M3M2 681 aa12.39□□□□□ -0.43
CAPN3-215ENST00000565559 PRR16Q569H4 304 aa12.39□□□□□ -0.43
CAPN3-215ENST00000565559 FAM78AQ5JUQ0 283 aa12.39□□□□□ -0.43
CAPN3-215ENST00000565559 FAM171A1Q5VUB5 890 aa12.39□□□□□ -0.43
CAPN3-215ENST00000565559 KIAA1211LQ6NV74 962 aa12.39□□□□□ -0.43
CAPN3-215ENST00000565559 Q6ZS52 159 aa12.39□□□□□ -0.43
CAPN3-215ENST00000565559 LNX1Q8TBB1 728 aaPredicted RBP12.39□□□□□ -0.43
CAPN3-215ENST00000565559 TRIM6Q9C030 488 aaPredicted RBP12.39□□□□□ -0.43
CAPN3-215ENST00000565559 IFT122Q9HBG6 1241 aa12.39□□□□□ -0.43
CAPN3-215ENST00000565559 RBM12Q9NTZ6 932 aaKnown RBP12.39□□□□□ -0.43
CAPN3-215ENST00000565559 GIT1Q9Y2X7 761 aa12.39□□□□□ -0.43
CAPN3-215ENST00000565559 MSRB2Q9Y3D2 182 aa12.39□□□□□ -0.43
CAPN3-215ENST00000565559 COL4A3BPQ9Y5P4 624 aa12.39□□□□□ -0.43
CAPN3-215ENST00000565559 SLC12A7Q9Y666 1083 aa12.39□□□□□ -0.43
CAPN3-215ENST00000565559 IGSF10Q6WRI0 2623 aa12.38□□□□□ -0.43
CAPN3-215ENST00000565559 CCDC163A0A0D9SF12 145 aa12.38□□□□□ -0.43
CAPN3-215ENST00000565559 ZNF197O14709 1029 aa12.38□□□□□ -0.43
CAPN3-215ENST00000565559 LRG1P02750 347 aa12.38□□□□□ -0.43
CAPN3-215ENST00000565559 CLCN1P35523 988 aa12.38□□□□□ -0.43
CAPN3-215ENST00000565559 CLK2P49760 499 aaKnown RBP12.38□□□□□ -0.43
CAPN3-215ENST00000565559 ELAVL2Q12926 359 aaKnown RBP12.38□□□□□ -0.43
CAPN3-215ENST00000565559 GRIK3Q13003 919 aa12.38□□□□□ -0.43
CAPN3-215ENST00000565559 RAB33AQ14088 237 aa12.38□□□□□ -0.43
CAPN3-215ENST00000565559 ELF2Q15723 593 aa12.38□□□□□ -0.43
CAPN3-215ENST00000565559 JAKMIP3Q5VZ66 844 aa12.38□□□□□ -0.43
CAPN3-215ENST00000565559 NOTUMQ6P988 496 aa12.38□□□□□ -0.43
CAPN3-215ENST00000565559 C19orf48Q6RUI8 117 aa12.38□□□□□ -0.43
CAPN3-215ENST00000565559 PROSER1Q86XN7 944 aa12.38□□□□□ -0.43
CAPN3-215ENST00000565559 YAF2Q8IY57 180 aa12.38□□□□□ -0.43
CAPN3-215ENST00000565559 SYNPOQ8N3V7 929 aa12.38□□□□□ -0.43
CAPN3-215ENST00000565559 CCDC51Q96ER9 411 aa12.38□□□□□ -0.43
CAPN3-215ENST00000565559 ZC3H10Q96K80 434 aaKnown RBP12.38□□□□□ -0.43
CAPN3-215ENST00000565559 MTA3Q9BTC8 594 aa12.38□□□□□ -0.43
CAPN3-215ENST00000565559 TMUB1Q9BVT8 246 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms