RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 YARSP54577 528 aaKnown RBP28.23■■■□□ 2.11
NME3-208ENST00000565379 LRRC63Q05C16 580 aa28.23■■■□□ 2.11
NME3-208ENST00000565379 EDRF1Q3B7T1 1238 aa28.23■■■□□ 2.11
NME3-208ENST00000565379 SLC9A9Q8IVB4 645 aa28.23■■■□□ 2.11
NME3-208ENST00000565379 ACAP3Q96P50 834 aa28.23■■■□□ 2.11
NME3-208ENST00000565379 NXF3Q9H4D5 531 aaKnown RBP28.23■■■□□ 2.11
NME3-208ENST00000565379 TOPORSQ9NS56 1045 aaPredicted RBP28.23■■■□□ 2.11
NME3-208ENST00000565379 PCDHB12Q9Y5F1 795 aa28.23■■■□□ 2.11
NME3-208ENST00000565379 PPP1R3GB7ZBB8 358 aa28.22■■■□□ 2.11
NME3-208ENST00000565379 NCK2O43639 380 aa28.22■■■□□ 2.11
NME3-208ENST00000565379 CCNE1P24864 410 aa28.22■■■□□ 2.11
NME3-208ENST00000565379 ERVFC1P60507 584 aa28.22■■■□□ 2.11
NME3-208ENST00000565379 RBM23Q86U06 439 aaKnown RBP28.22■■■□□ 2.11
NME3-208ENST00000565379 THNSL1Q8IYQ7 743 aa28.22■■■□□ 2.11
NME3-208ENST00000565379 HAPLN2Q9GZV7 340 aa28.22■■■□□ 2.11
NME3-208ENST00000565379 RSAD1Q9HA92 442 aa28.22■■■□□ 2.11
NME3-208ENST00000565379 HARSP12081 509 aaKnown RBP28.21■■■□□ 2.11
NME3-208ENST00000565379 RBM10P98175 930 aaKnown RBP28.21■■■□□ 2.11
NME3-208ENST00000565379 GLB1LQ6UWU2 654 aa28.21■■■□□ 2.11
NME3-208ENST00000565379 ABI1Q8IZP0 508 aa28.21■■■□□ 2.11
NME3-208ENST00000565379 CBWD1Q9BRT8 395 aa28.21■■■□□ 2.11
NME3-208ENST00000565379 IKZF4Q9H2S9 585 aa28.21■■■□□ 2.11
NME3-208ENST00000565379 ANO10Q9NW15 660 aa28.21■■■□□ 2.11
NME3-208ENST00000565379 SNTG2Q9NY99 539 aa28.21■■■□□ 2.11
NME3-208ENST00000565379 HSPBP1Q9NZL4 362 aa28.21■■■□□ 2.11
NME3-208ENST00000565379 PARP2Q9UGN5 583 aa28.21■■■□□ 2.11
NME3-208ENST00000565379 TISP43B9A030 160 aa28.2■■■□□ 2.1
NME3-208ENST00000565379 EXTL3O43909 919 aa28.2■■■□□ 2.1
NME3-208ENST00000565379 NRIP1P48552 1158 aa28.2■■■□□ 2.1
NME3-208ENST00000565379 PAK1Q13153 545 aa28.2■■■□□ 2.1
NME3-208ENST00000565379 STX1AQ16623 288 aa28.2■■■□□ 2.1
NME3-208ENST00000565379 ZCWPW2Q504Y3 356 aa28.2■■■□□ 2.1
NME3-208ENST00000565379 AGMOQ6ZNB7 445 aa28.2■■■□□ 2.1
NME3-208ENST00000565379 CD302Q8IX05 232 aa28.2■■■□□ 2.1
NME3-208ENST00000565379 GPD1LQ8N335 351 aa28.2■■■□□ 2.1
NME3-208ENST00000565379 XXYLT1Q8NBI6 393 aa28.2■■■□□ 2.1
NME3-208ENST00000565379 TSPAN18Q96SJ8 248 aa28.2■■■□□ 2.1
NME3-208ENST00000565379 PLEKHA5Q9HAU0 1116 aa28.2■■■□□ 2.1
NME3-208ENST00000565379 C11orf16Q9NQ32 467 aa28.2■■■□□ 2.1
NME3-208ENST00000565379 KANSL3Q9P2N6 904 aa28.2■■■□□ 2.1
NME3-208ENST00000565379 FAM50BQ9Y247 325 aa28.2■■■□□ 2.1
NME3-208ENST00000565379 HCN4Q9Y3Q4 1203 aa28.2■■■□□ 2.1
NME3-208ENST00000565379 HES2Q9Y543 173 aa28.2■■■□□ 2.1
NME3-208ENST00000565379 INPPL1O15357 1258 aa28.19■■■□□ 2.1
NME3-208ENST00000565379 FAM189A1O60320 539 aa28.19■■■□□ 2.1
NME3-208ENST00000565379 CD44P16070 742 aaKnown RBP28.19■■■□□ 2.1
NME3-208ENST00000565379 LAG3P18627 525 aa28.19■■■□□ 2.1
NME3-208ENST00000565379 SSTR3P32745 418 aaPredicted RBP28.19■■■□□ 2.1
NME3-208ENST00000565379 KCNT2Q6UVM3 1135 aa28.19■■■□□ 2.1
NME3-208ENST00000565379 LRRC43Q8N309 656 aa28.19■■■□□ 2.1
NME3-208ENST00000565379 NELFBQ8WX92 580 aa28.19■■■□□ 2.1
NME3-208ENST00000565379 APOL6Q9BWW8 343 aa28.19■■■□□ 2.1
NME3-208ENST00000565379 MRPL9Q9BYD2 267 aaKnown RBP28.19■■■□□ 2.1
NME3-208ENST00000565379 RPF1Q9H9Y2 349 aaKnown RBP28.19■■■□□ 2.1
NME3-208ENST00000565379 AAASQ9NRG9 546 aa28.19■■■□□ 2.1
NME3-208ENST00000565379 DMAC2Q9NW81 257 aa28.19■■■□□ 2.1
NME3-208ENST00000565379 CPSF3Q9UKF6 684 aaKnown RBP28.19■■■□□ 2.1
NME3-208ENST00000565379 PER2O15055 1255 aa28.18■■■□□ 2.1
NME3-208ENST00000565379 CLIC2O15247 247 aa28.18■■■□□ 2.1
NME3-208ENST00000565379 RECQL4O94761 1208 aa28.18■■■□□ 2.1
NME3-208ENST00000565379 NR3C1P04150 777 aa28.18■■■□□ 2.1
NME3-208ENST00000565379 ERCC5P28715 1186 aaPredicted RBP28.18■■■□□ 2.1
NME3-208ENST00000565379 ADAM15Q13444 863 aa28.18■■■□□ 2.1
NME3-208ENST00000565379 CEP120Q8N960 986 aa28.18■■■□□ 2.1
NME3-208ENST00000565379 URGCPQ8TCY9 931 aa28.18■■■□□ 2.1
NME3-208ENST00000565379 FBXL18Q96ME1 805 aa28.18■■■□□ 2.1
NME3-208ENST00000565379 RNF39Q9H2S5 420 aa28.18■■■□□ 2.1
NME3-208ENST00000565379 PCIF1Q9H4Z3 704 aa28.18■■■□□ 2.1
NME3-208ENST00000565379 RWDD2AQ9UIY3 292 aa28.18■■■□□ 2.1
NME3-208ENST00000565379 GTF3C5Q9Y5Q8 519 aaPredicted RBP28.18■■■□□ 2.1
NME3-208ENST00000565379 OFD1O75665 1012 aa28.17■■■□□ 2.1
NME3-208ENST00000565379 GLP2RO95838 553 aa28.17■■■□□ 2.1
NME3-208ENST00000565379 CCDC192P0DO97 292 aa28.17■■■□□ 2.1
NME3-208ENST00000565379 AKAP5P24588 427 aa28.17■■■□□ 2.1
NME3-208ENST00000565379 FKBP3Q00688 224 aaKnown RBP28.17■■■□□ 2.1
NME3-208ENST00000565379 DPCR1Q3MIW9 517 aa28.17■■■□□ 2.1
NME3-208ENST00000565379 KLHL10Q6JEL2 608 aa28.17■■■□□ 2.1
NME3-208ENST00000565379 VN1R2Q8NFZ6 395 aa28.17■■■□□ 2.1
NME3-208ENST00000565379 MICAL1Q8TDZ2 1067 aa28.17■■■□□ 2.1
NME3-208ENST00000565379 FAM213AQ9BRX8 229 aa28.17■■■□□ 2.1
NME3-208ENST00000565379 TLR9Q9NR96 1032 aa28.17■■■□□ 2.1
NME3-208ENST00000565379 ZNF233A6NK53 670 aa28.16■■■□□ 2.1
NME3-208ENST00000565379 NT5C1B-RDH14C9J2C7 533 aa28.16■■■□□ 2.1
NME3-208ENST00000565379 FSCN2O14926 492 aa28.16■■■□□ 2.1
NME3-208ENST00000565379 B4GALT3O60512 393 aa28.16■■■□□ 2.1
NME3-208ENST00000565379 EXOC3O60645 756 aa28.16■■■□□ 2.1
NME3-208ENST00000565379 OSTNP61366 133 aa28.16■■■□□ 2.1
NME3-208ENST00000565379 ADAM9Q13443 819 aa28.16■■■□□ 2.1
NME3-208ENST00000565379 PLPP4Q5VZY2 271 aa28.16■■■□□ 2.1
NME3-208ENST00000565379 ANKRD40Q6AI12 368 aa28.16■■■□□ 2.1
NME3-208ENST00000565379 ZNF558Q96NG5 402 aa28.16■■■□□ 2.1
NME3-208ENST00000565379 RPS6KC1Q96S38 1066 aa28.16■■■□□ 2.1
NME3-208ENST00000565379 CLEC1BQ9P126 229 aa28.16■■■□□ 2.1
NME3-208ENST00000565379 CTNND2Q9UQB3 1225 aa28.16■■■□□ 2.1
NME3-208ENST00000565379 INPP5FQ9Y2H2 1132 aa28.16■■■□□ 2.1
NME3-208ENST00000565379 FRMD4BQ9Y2L6 1034 aa28.16■■■□□ 2.1
NME3-208ENST00000565379 ARL5CA6NH57 179 aa28.15■■■□□ 2.1
NME3-208ENST00000565379 CETN3O15182 167 aa28.15■■■□□ 2.1
NME3-208ENST00000565379 MAPK13O15264 365 aa28.15■■■□□ 2.1
NME3-208ENST00000565379 IL18RAPO95256 599 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms