RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 PRSS33Q8NF86 280 aa16.12■□□□□ 0.17
USB1-210ENST00000565151 KCNN1Q92952 543 aa16.12■□□□□ 0.17
USB1-210ENST00000565151 MYADMQ96S97 322 aa16.12■□□□□ 0.17
USB1-210ENST00000565151 RHOBTB2Q9BYZ6 727 aa16.12■□□□□ 0.17
USB1-210ENST00000565151 IKZF4Q9H2S9 585 aa16.12■□□□□ 0.17
USB1-210ENST00000565151 WDR6Q9NNW5 1121 aaKnown RBP16.12■□□□□ 0.17
USB1-210ENST00000565151 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.12■□□□□ 0.17
USB1-210ENST00000565151 FOXD4L1Q9NU39 408 aa16.12■□□□□ 0.17
USB1-210ENST00000565151 FBXO2Q9UK22 296 aaPredicted RBP16.12■□□□□ 0.17
USB1-210ENST00000565151 FBXW11Q9UKB1 542 aa16.12■□□□□ 0.17
USB1-210ENST00000565151 MTMR6Q9Y217 621 aa16.12■□□□□ 0.17
USB1-210ENST00000565151 TCHHQ07283 1943 aa16.11■□□□□ 0.17
USB1-210ENST00000565151 COL4A3Q01955 1670 aa16.11■□□□□ 0.17
USB1-210ENST00000565151 B3GAT3O94766 335 aa16.11■□□□□ 0.17
USB1-210ENST00000565151 C1RP00736 705 aa16.11■□□□□ 0.17
USB1-210ENST00000565151 TKTP29401 623 aaKnown RBP16.11■□□□□ 0.17
USB1-210ENST00000565151 TNFSF9P41273 254 aa16.11■□□□□ 0.17
USB1-210ENST00000565151 ZNF131P52739 623 aa16.11■□□□□ 0.17
USB1-210ENST00000565151 NTHL1P78549 312 aa16.11■□□□□ 0.17
USB1-210ENST00000565151 SLC39A4Q6P5W5 647 aa16.11■□□□□ 0.17
USB1-210ENST00000565151 DCLRE1AQ6PJP8 1040 aa16.11■□□□□ 0.17
USB1-210ENST00000565151 GPBP1Q86WP2 473 aa16.11■□□□□ 0.17
USB1-210ENST00000565151 FBXL6Q8N531 539 aa16.11■□□□□ 0.17
USB1-210ENST00000565151 KCTD17Q8N5Z5 321 aa16.11■□□□□ 0.17
USB1-210ENST00000565151 ST13P5Q8NFI4 369 aaPredicted RBP16.11■□□□□ 0.17
USB1-210ENST00000565151 HDAC7Q8WUI4 952 aa16.11■□□□□ 0.17
USB1-210ENST00000565151 RSAD2Q8WXG1 361 aa16.11■□□□□ 0.17
USB1-210ENST00000565151 SMG7Q92540 1137 aaKnown RBP16.11■□□□□ 0.17
USB1-210ENST00000565151 RAD54LQ92698 747 aa16.11■□□□□ 0.17
USB1-210ENST00000565151 DDX27Q96GQ7 796 aaKnown RBP16.11■□□□□ 0.17
USB1-210ENST00000565151 CLIC6Q96NY7 704 aa16.11■□□□□ 0.17
USB1-210ENST00000565151 CNTN3Q9P232 1028 aa16.11■□□□□ 0.17
USB1-210ENST00000565151 SORCS3Q9UPU3 1222 aa16.11■□□□□ 0.17
USB1-210ENST00000565151 TOM1L1O75674 476 aa16.1■□□□□ 0.17
USB1-210ENST00000565151 ZMYND10O75800 440 aa16.1■□□□□ 0.17
USB1-210ENST00000565151 MARCKSP29966 332 aaPredicted RBP16.1■□□□□ 0.17
USB1-210ENST00000565151 LONP1P36776 959 aaKnown RBP16.1■□□□□ 0.17
USB1-210ENST00000565151 UBA7P41226 1012 aa16.1■□□□□ 0.17
USB1-210ENST00000565151 SPAG1Q07617 926 aa16.1■□□□□ 0.17
USB1-210ENST00000565151 MCL1Q07820 350 aa16.1■□□□□ 0.17
USB1-210ENST00000565151 POTEHQ6S545 545 aa16.1■□□□□ 0.17
USB1-210ENST00000565151 ZPBP2Q6X784 338 aa16.1■□□□□ 0.17
USB1-210ENST00000565151 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.1■□□□□ 0.17
USB1-210ENST00000565151 CCDC149Q6ZUS6 474 aa16.1■□□□□ 0.17
USB1-210ENST00000565151 HAUS6Q7Z4H7 955 aa16.1■□□□□ 0.17
USB1-210ENST00000565151 CDK5RAP3Q96JB5 506 aa16.1■□□□□ 0.17
USB1-210ENST00000565151 MFSD14AQ96MC6 490 aa16.1■□□□□ 0.17
USB1-210ENST00000565151 ACAP3Q96P50 834 aa16.1■□□□□ 0.17
USB1-210ENST00000565151 PHOX2BQ99453 314 aa16.1■□□□□ 0.17
USB1-210ENST00000565151 CCDC94Q9BW85 323 aaPredicted RBP16.1■□□□□ 0.17
USB1-210ENST00000565151 PRKD2Q9BZL6 878 aa16.1■□□□□ 0.17
USB1-210ENST00000565151 CCSER1Q9C0I3 900 aa16.1■□□□□ 0.17
USB1-210ENST00000565151 PLEKHA4Q9H4M7 779 aa16.1■□□□□ 0.17
USB1-210ENST00000565151 KCND2Q9NZV8 630 aa16.1■□□□□ 0.17
USB1-210ENST00000565151 ANKFY1Q9P2R3 1169 aa16.1■□□□□ 0.17
USB1-210ENST00000565151 MTRRQ9UBK8 725 aa16.1■□□□□ 0.17
USB1-210ENST00000565151 TUBGCP4Q9UGJ1 667 aa16.1■□□□□ 0.17
USB1-210ENST00000565151 CLUHO75153 1309 aa16.1■□□□□ 0.17
USB1-210ENST00000565151 A0A087X0B3 334 aa16.09■□□□□ 0.17
USB1-210ENST00000565151 TISP43B9A030 160 aa16.09■□□□□ 0.17
USB1-210ENST00000565151 SLC26A4O43511 780 aa16.09■□□□□ 0.17
USB1-210ENST00000565151 NARSO43776 548 aaKnown RBP16.09■□□□□ 0.17
USB1-210ENST00000565151 TBC1D4O60343 1298 aa16.09■□□□□ 0.17
USB1-210ENST00000565151 CXCL8P10145 99 aa16.09■□□□□ 0.17
USB1-210ENST00000565151 OR1D2P34982 312 aa16.09■□□□□ 0.17
USB1-210ENST00000565151 NHLH1Q02575 133 aa16.09■□□□□ 0.17
USB1-210ENST00000565151 TCF15Q12870 199 aa16.09■□□□□ 0.17
USB1-210ENST00000565151 RAB33AQ14088 237 aa16.09■□□□□ 0.17
USB1-210ENST00000565151 NOLC1Q14978 699 aaKnown RBP eCLIP16.09■□□□□ 0.17
USB1-210ENST00000565151 TCHPQ9BT92 498 aa16.09■□□□□ 0.17
USB1-210ENST00000565151 KCNK12Q9HB15 430 aa16.09■□□□□ 0.17
USB1-210ENST00000565151 ODF2LQ9ULJ1 636 aa16.09■□□□□ 0.17
USB1-210ENST00000565151 TTC26A0AVF1 554 aa16.08■□□□□ 0.16
USB1-210ENST00000565151 SPDYE4A6NLX3 237 aa16.08■□□□□ 0.16
USB1-210ENST00000565151 PODXLO00592 558 aa16.08■□□□□ 0.16
USB1-210ENST00000565151 NMT1P30419 496 aaKnown RBP16.08■□□□□ 0.16
USB1-210ENST00000565151 MTMR3Q13615 1198 aa16.08■□□□□ 0.16
USB1-210ENST00000565151 MRPL58Q14197 206 aaKnown RBP16.08■□□□□ 0.16
USB1-210ENST00000565151 ZBTB6Q15916 424 aa16.08■□□□□ 0.16
USB1-210ENST00000565151 ZC2HC1CQ53FD0 456 aaPredicted RBP16.08■□□□□ 0.16
USB1-210ENST00000565151 OTOP3Q7RTS5 596 aa16.08■□□□□ 0.16
USB1-210ENST00000565151 UBALD2Q8IYN6 164 aa16.08■□□□□ 0.16
USB1-210ENST00000565151 PLCD3Q8N3E9 789 aa16.08■□□□□ 0.16
USB1-210ENST00000565151 UROC1Q96N76 676 aa16.08■□□□□ 0.16
USB1-210ENST00000565151 USP28Q96RU2 1077 aa16.08■□□□□ 0.16
USB1-210ENST00000565151 ZDHHC7Q9NXF8 308 aa16.08■□□□□ 0.16
USB1-210ENST00000565151 TBX20Q9UMR3 447 aa16.08■□□□□ 0.16
USB1-210ENST00000565151 ANKRD63C9JTQ0 380 aa16.07■□□□□ 0.16
USB1-210ENST00000565151 NRG2O14511 850 aaPredicted RBP16.07■□□□□ 0.16
USB1-210ENST00000565151 PIGRP01833 764 aa16.07■□□□□ 0.16
USB1-210ENST00000565151 NPR3P17342 541 aa16.07■□□□□ 0.16
USB1-210ENST00000565151 AVPR2P30518 371 aa16.07■□□□□ 0.16
USB1-210ENST00000565151 GUCY2FP51841 1108 aa16.07■□□□□ 0.16
USB1-210ENST00000565151 SMTNP53814 917 aa16.07■□□□□ 0.16
USB1-210ENST00000565151 YARSP54577 528 aaKnown RBP16.07■□□□□ 0.16
USB1-210ENST00000565151 CEBPZQ03701 1054 aaKnown RBP16.07■□□□□ 0.16
USB1-210ENST00000565151 STRN3Q13033 797 aa16.07■□□□□ 0.16
USB1-210ENST00000565151 ENOX2Q16206 610 aaKnown RBP16.07■□□□□ 0.16
USB1-210ENST00000565151 CYP26C1Q6V0L0 522 aa16.07■□□□□ 0.16
USB1-210ENST00000565151 GRASPQ7Z6J2 395 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms