RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 DDIT3P35638 169 aa14.9□□□□□ -0.02
VPS9D1-204ENST00000565023 MTHFRP42898 656 aa14.9□□□□□ -0.02
VPS9D1-204ENST00000565023 BRCC3P46736 316 aa14.9□□□□□ -0.02
VPS9D1-204ENST00000565023 SOX4Q06945 474 aaPredicted RBP14.9□□□□□ -0.02
VPS9D1-204ENST00000565023 SPAG1Q07617 926 aa14.9□□□□□ -0.02
VPS9D1-204ENST00000565023 TMEM130Q8N3G9 435 aa14.9□□□□□ -0.02
VPS9D1-204ENST00000565023 PDILTQ8N807 584 aa14.9□□□□□ -0.02
VPS9D1-204ENST00000565023 KRI1Q8N9T8 703 aaKnown RBP14.9□□□□□ -0.02
VPS9D1-204ENST00000565023 ZMAT2Q96NC0 199 aaKnown RBP14.9□□□□□ -0.02
VPS9D1-204ENST00000565023 C2CD4DB7Z1M9 353 aa14.89□□□□□ -0.03
VPS9D1-204ENST00000565023 H0YCG3 227 aa14.89□□□□□ -0.03
VPS9D1-204ENST00000565023 HNRNPDLO14979 420 aaKnown RBP14.89□□□□□ -0.03
VPS9D1-204ENST00000565023 CLDN3O15551 220 aa14.89□□□□□ -0.03
VPS9D1-204ENST00000565023 PPP6R2O75170 966 aa14.89□□□□□ -0.03
VPS9D1-204ENST00000565023 RFPL2O75678 378 aa14.89□□□□□ -0.03
VPS9D1-204ENST00000565023 PSMD5Q16401 504 aa14.89□□□□□ -0.03
VPS9D1-204ENST00000565023 ZC2HC1CQ53FD0 456 aaPredicted RBP14.89□□□□□ -0.03
VPS9D1-204ENST00000565023 C18orf25Q96B23 403 aaPredicted RBP14.89□□□□□ -0.03
VPS9D1-204ENST00000565023 FAM212AQ96EL1 285 aa14.89□□□□□ -0.03
VPS9D1-204ENST00000565023 NECTIN4Q96NY8 510 aa14.89□□□□□ -0.03
VPS9D1-204ENST00000565023 TTPALQ9BTX7 342 aa14.89□□□□□ -0.03
VPS9D1-204ENST00000565023 HAPLN2Q9GZV7 340 aa14.89□□□□□ -0.03
VPS9D1-204ENST00000565023 RXFP1Q9HBX9 757 aa14.89□□□□□ -0.03
VPS9D1-204ENST00000565023 TBC1D7Q9P0N9 293 aa14.89□□□□□ -0.03
VPS9D1-204ENST00000565023 DAXXQ9UER7 740 aaPredicted RBP14.89□□□□□ -0.03
VPS9D1-204ENST00000565023 TBX20Q9UMR3 447 aa14.89□□□□□ -0.03
VPS9D1-204ENST00000565023 NR2E1Q9Y466 385 aa14.89□□□□□ -0.03
VPS9D1-204ENST00000565023 DENND4AQ7Z401 1863 aa14.89□□□□□ -0.03
VPS9D1-204ENST00000565023 CACNA1AO00555 2505 aa14.88□□□□□ -0.03
VPS9D1-204ENST00000565023 PODXLO00592 558 aa14.88□□□□□ -0.03
VPS9D1-204ENST00000565023 SPTLC2O15270 562 aa14.88□□□□□ -0.03
VPS9D1-204ENST00000565023 TGM5O43548 720 aa14.88□□□□□ -0.03
VPS9D1-204ENST00000565023 GPR37L1O60883 481 aa14.88□□□□□ -0.03
VPS9D1-204ENST00000565023 CXCL8P10145 99 aa14.88□□□□□ -0.03
VPS9D1-204ENST00000565023 TNFSF9P41273 254 aa14.88□□□□□ -0.03
VPS9D1-204ENST00000565023 STAT6P42226 847 aa14.88□□□□□ -0.03
VPS9D1-204ENST00000565023 DNM1Q05193 864 aaKnown RBP14.88□□□□□ -0.03
VPS9D1-204ENST00000565023 DCLRE1AQ6PJP8 1040 aa14.88□□□□□ -0.03
VPS9D1-204ENST00000565023 ZPBP2Q6X784 338 aa14.88□□□□□ -0.03
VPS9D1-204ENST00000565023 SV2BQ7L1I2 683 aa14.88□□□□□ -0.03
VPS9D1-204ENST00000565023 GPR149Q86SP6 731 aa14.88□□□□□ -0.03
VPS9D1-204ENST00000565023 SFR1Q86XK3 245 aa14.88□□□□□ -0.03
VPS9D1-204ENST00000565023 C3orf58Q8NDZ4 430 aa14.88□□□□□ -0.03
VPS9D1-204ENST00000565023 STAMQ92783 540 aa14.88□□□□□ -0.03
VPS9D1-204ENST00000565023 PIDD1Q9HB75 910 aa14.88□□□□□ -0.03
VPS9D1-204ENST00000565023 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.88□□□□□ -0.03
VPS9D1-204ENST00000565023 STK17AQ9UEE5 414 aa14.88□□□□□ -0.03
VPS9D1-204ENST00000565023 CFAP45Q9UL16 551 aa14.88□□□□□ -0.03
VPS9D1-204ENST00000565023 DOCK6Q96HP0 2047 aa14.87□□□□□ -0.03
VPS9D1-204ENST00000565023 A0A087X0B3 334 aa14.87□□□□□ -0.03
VPS9D1-204ENST00000565023 CCDC195A0A1B0GUA6 201 aa14.87□□□□□ -0.03
VPS9D1-204ENST00000565023 MYMKA6NI61 221 aa14.87□□□□□ -0.03
VPS9D1-204ENST00000565023 MEFVO15553 781 aaPredicted RBP14.87□□□□□ -0.03
VPS9D1-204ENST00000565023 ADAM12O43184 909 aa14.87□□□□□ -0.03
VPS9D1-204ENST00000565023 IDEP14735 1019 aa14.87□□□□□ -0.03
VPS9D1-204ENST00000565023 TKTP29401 623 aaKnown RBP14.87□□□□□ -0.03
VPS9D1-204ENST00000565023 ZNF131P52739 623 aa14.87□□□□□ -0.03
VPS9D1-204ENST00000565023 NUCB2P80303 420 aa14.87□□□□□ -0.03
VPS9D1-204ENST00000565023 MCL1Q07820 350 aa14.87□□□□□ -0.03
VPS9D1-204ENST00000565023 ELAVL2Q12926 359 aaKnown RBP14.87□□□□□ -0.03
VPS9D1-204ENST00000565023 UPP1Q16831 310 aa14.87□□□□□ -0.03
VPS9D1-204ENST00000565023 SLC10A6Q3KNW5 377 aa14.87□□□□□ -0.03
VPS9D1-204ENST00000565023 HERC4Q5GLZ8 1057 aaPredicted RBP14.87□□□□□ -0.03
VPS9D1-204ENST00000565023 ZBTB41Q5SVQ8 909 aa14.87□□□□□ -0.03
VPS9D1-204ENST00000565023 ELMSAN1Q6PJG2 1045 aa14.87□□□□□ -0.03
VPS9D1-204ENST00000565023 ALKAL1Q6UXT8 129 aa14.87□□□□□ -0.03
VPS9D1-204ENST00000565023 ALYREFQ86V81 257 aaKnown RBP14.87□□□□□ -0.03
VPS9D1-204ENST00000565023 TDRD5Q8NAT2 981 aaKnown RBP14.87□□□□□ -0.03
VPS9D1-204ENST00000565023 KREMEN2Q8NCW0 462 aa14.87□□□□□ -0.03
VPS9D1-204ENST00000565023 LNX1Q8TBB1 728 aaPredicted RBP14.87□□□□□ -0.03
VPS9D1-204ENST00000565023 PIK3R5Q8WYR1 880 aa14.87□□□□□ -0.03
VPS9D1-204ENST00000565023 SMG7Q92540 1137 aaKnown RBP14.87□□□□□ -0.03
VPS9D1-204ENST00000565023 DDX12PQ92771 950 aa14.87□□□□□ -0.03
VPS9D1-204ENST00000565023 UROC1Q96N76 676 aa14.87□□□□□ -0.03
VPS9D1-204ENST00000565023 IKZF4Q9H2S9 585 aa14.87□□□□□ -0.03
VPS9D1-204ENST00000565023 SLC38A7Q9NVC3 462 aa14.87□□□□□ -0.03
VPS9D1-204ENST00000565023 CNTN3Q9P232 1028 aa14.87□□□□□ -0.03
VPS9D1-204ENST00000565023 TUBGCP4Q9UGJ1 667 aa14.87□□□□□ -0.03
VPS9D1-204ENST00000565023 NUB1Q9Y5A7 615 aa14.87□□□□□ -0.03
VPS9D1-204ENST00000565023 TISP43B9A030 160 aa14.86□□□□□ -0.03
VPS9D1-204ENST00000565023 ASGR2P07307 311 aa14.86□□□□□ -0.03
VPS9D1-204ENST00000565023 ANP32AP39687 249 aaKnown RBP14.86□□□□□ -0.03
VPS9D1-204ENST00000565023 GUCY2FP51841 1108 aa14.86□□□□□ -0.03
VPS9D1-204ENST00000565023 CREMQ03060 361 aa14.86□□□□□ -0.03
VPS9D1-204ENST00000565023 XKR4Q5GH76 650 aa14.86□□□□□ -0.03
VPS9D1-204ENST00000565023 CD300LGQ6UXG3 332 aa14.86□□□□□ -0.03
VPS9D1-204ENST00000565023 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.86□□□□□ -0.03
VPS9D1-204ENST00000565023 CCDC73Q6ZRK6 1079 aa14.86□□□□□ -0.03
VPS9D1-204ENST00000565023 CCDC149Q6ZUS6 474 aa14.86□□□□□ -0.03
VPS9D1-204ENST00000565023 KCNG4Q8TDN1 519 aa14.86□□□□□ -0.03
VPS9D1-204ENST00000565023 KIF12Q96FN5 646 aa14.86□□□□□ -0.03
VPS9D1-204ENST00000565023 CLSTN3Q9BQT9 956 aa14.86□□□□□ -0.03
VPS9D1-204ENST00000565023 MSTO1Q9BUK6 570 aa14.86□□□□□ -0.03
VPS9D1-204ENST00000565023 FNIP2Q9P278 1114 aa14.86□□□□□ -0.03
VPS9D1-204ENST00000565023 RCOR1Q9UKL0 485 aa14.86□□□□□ -0.03
VPS9D1-204ENST00000565023 ATP6V1DQ9Y5K8 247 aa14.86□□□□□ -0.03
VPS9D1-204ENST00000565023 ANK1P16157 1881 aa14.85□□□□□ -0.03
VPS9D1-204ENST00000565023 LACTBL1A8MY62 500 aa14.85□□□□□ -0.03
VPS9D1-204ENST00000565023 PRR33A8MZF0 331 aa14.85□□□□□ -0.03
VPS9D1-204ENST00000565023 ANKRD63C9JTQ0 380 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms