RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 CD101Q93033 1021 aa21.82■■□□□ 1.08
MAP1LC3B-206ENST00000564844 FIZ1Q96SL8 496 aa21.82■■□□□ 1.08
MAP1LC3B-206ENST00000564844 WDR18Q9BV38 432 aa21.82■■□□□ 1.08
MAP1LC3B-206ENST00000564844 VPS37BQ9H9H4 285 aa21.82■■□□□ 1.08
MAP1LC3B-206ENST00000564844 TXLNGQ9NUQ3 528 aa21.82■■□□□ 1.08
MAP1LC3B-206ENST00000564844 NUMBLQ9Y6R0 609 aa21.82■■□□□ 1.08
MAP1LC3B-206ENST00000564844 C2orf71A6NGG8 1288 aa21.82■■□□□ 1.08
MAP1LC3B-206ENST00000564844 IVDP26440 423 aa21.82■■□□□ 1.08
MAP1LC3B-206ENST00000564844 PSMC4P43686 418 aa21.82■■□□□ 1.08
MAP1LC3B-206ENST00000564844 EAPPQ56P03 285 aaPredicted RBP21.82■■□□□ 1.08
MAP1LC3B-206ENST00000564844 IZUMO3Q5VZ72 239 aa21.82■■□□□ 1.08
MAP1LC3B-206ENST00000564844 STK32AQ8WU08 396 aa21.82■■□□□ 1.08
MAP1LC3B-206ENST00000564844 RBM15Q96T37 977 aaKnown RBP eCLIP21.82■■□□□ 1.08
MAP1LC3B-206ENST00000564844 DOT1LQ8TEK3 1739 aa21.81■■□□□ 1.08
MAP1LC3B-206ENST00000564844 IGKV6D-41A0A0C4DH26 115 aa21.81■■□□□ 1.08
MAP1LC3B-206ENST00000564844 FAM47DPA6NHR8 397 aa21.81■■□□□ 1.08
MAP1LC3B-206ENST00000564844 T-ENOLP0DO92 83 aa21.81■■□□□ 1.08
MAP1LC3B-206ENST00000564844 HOXA7P31268 230 aaPredicted RBP21.81■■□□□ 1.08
MAP1LC3B-206ENST00000564844 POLGP54098 1239 aaPredicted RBP21.81■■□□□ 1.08
MAP1LC3B-206ENST00000564844 FMO1Q01740 532 aa21.81■■□□□ 1.08
MAP1LC3B-206ENST00000564844 CCDC174Q6PII3 467 aa21.81■■□□□ 1.08
MAP1LC3B-206ENST00000564844 PASD1Q8IV76 773 aa21.81■■□□□ 1.08
MAP1LC3B-206ENST00000564844 ACSF2Q96CM8 615 aaPredicted RBP21.81■■□□□ 1.08
MAP1LC3B-206ENST00000564844 AMNQ9BXJ7 453 aa21.81■■□□□ 1.08
MAP1LC3B-206ENST00000564844 CYP3A7-CYP3A51PA0A087WV96 503 aa21.81■■□□□ 1.08
MAP1LC3B-206ENST00000564844 FGFR1P11362 822 aa21.81■■□□□ 1.08
MAP1LC3B-206ENST00000564844 CYP3A7P24462 503 aa21.81■■□□□ 1.08
MAP1LC3B-206ENST00000564844 RASA3Q14644 834 aa21.81■■□□□ 1.08
MAP1LC3B-206ENST00000564844 SLC1A5Q15758 541 aa21.81■■□□□ 1.08
MAP1LC3B-206ENST00000564844 KHDC1Q4VXA5 237 aaKnown RBP21.81■■□□□ 1.08
MAP1LC3B-206ENST00000564844 EGFL6Q8IUX8 553 aa21.81■■□□□ 1.08
MAP1LC3B-206ENST00000564844 SEMA4DQ92854 862 aa21.81■■□□□ 1.08
MAP1LC3B-206ENST00000564844 TMEM117Q9H0C3 514 aa21.81■■□□□ 1.08
MAP1LC3B-206ENST00000564844 LRRD1A4D1F6 860 aa21.81■■□□□ 1.08
MAP1LC3B-206ENST00000564844 CYP3A4P08684 503 aa21.81■■□□□ 1.08
MAP1LC3B-206ENST00000564844 CCNB1P14635 433 aa21.81■■□□□ 1.08
MAP1LC3B-206ENST00000564844 NOVP48745 357 aa21.81■■□□□ 1.08
MAP1LC3B-206ENST00000564844 ATP13A4Q4VNC1 1196 aa21.81■■□□□ 1.08
MAP1LC3B-206ENST00000564844 SLC7A6OSQ96CW6 309 aaPredicted RBP21.81■■□□□ 1.08
MAP1LC3B-206ENST00000564844 DDX50Q9BQ39 737 aaKnown RBP21.81■■□□□ 1.08
MAP1LC3B-206ENST00000564844 LRRC4BQ9NT99 713 aa21.81■■□□□ 1.08
MAP1LC3B-206ENST00000564844 CYP39A1Q9NYL5 469 aa21.81■■□□□ 1.08
MAP1LC3B-206ENST00000564844 A0A0G2JND7 137 aa21.8■■□□□ 1.08
MAP1LC3B-206ENST00000564844 CFAP69A5D8W1 941 aa21.8■■□□□ 1.08
MAP1LC3B-206ENST00000564844 GAS7O60861 476 aa21.8■■□□□ 1.08
MAP1LC3B-206ENST00000564844 CDH16O75309 829 aa21.8■■□□□ 1.08
MAP1LC3B-206ENST00000564844 GNAZP19086 355 aa21.8■■□□□ 1.08
MAP1LC3B-206ENST00000564844 ITIH2P19823 946 aa21.8■■□□□ 1.08
MAP1LC3B-206ENST00000564844 NOP14P78316 857 aaKnown RBP21.8■■□□□ 1.08
MAP1LC3B-206ENST00000564844 P3H1Q32P28 736 aa21.8■■□□□ 1.08
MAP1LC3B-206ENST00000564844 DSTYKQ6XUX3 929 aa21.8■■□□□ 1.08
MAP1LC3B-206ENST00000564844 ANKMY2Q8IV38 441 aa21.8■■□□□ 1.08
MAP1LC3B-206ENST00000564844 TEKT4Q8WW24 435 aa21.8■■□□□ 1.08
MAP1LC3B-206ENST00000564844 C10orf88Q9H8K7 445 aa21.8■■□□□ 1.08
MAP1LC3B-206ENST00000564844 GPRC5CQ9NQ84 441 aa21.8■■□□□ 1.08
MAP1LC3B-206ENST00000564844 ARFGEF1Q9Y6D6 1849 aa21.8■■□□□ 1.08
MAP1LC3B-206ENST00000564844 A6NHS1 94 aa21.8■■□□□ 1.08
MAP1LC3B-206ENST00000564844 F5H6K3 240 aa21.8■■□□□ 1.08
MAP1LC3B-206ENST00000564844 KRT10P13645 584 aa21.8■■□□□ 1.08
MAP1LC3B-206ENST00000564844 GAP43P17677 238 aa21.8■■□□□ 1.08
MAP1LC3B-206ENST00000564844 CALRP27797 417 aaKnown RBP21.8■■□□□ 1.08
MAP1LC3B-206ENST00000564844 CETN1Q12798 172 aa21.8■■□□□ 1.08
MAP1LC3B-206ENST00000564844 CERS5Q8N5B7 392 aa21.8■■□□□ 1.08
MAP1LC3B-206ENST00000564844 SH3GL3Q99963 347 aa21.8■■□□□ 1.08
MAP1LC3B-206ENST00000564844 HSD17B14Q9BPX1 270 aa21.8■■□□□ 1.08
MAP1LC3B-206ENST00000564844 KIFC3Q9BVG8 833 aa21.8■■□□□ 1.08
MAP1LC3B-206ENST00000564844 MAPK13O15264 365 aa21.79■■□□□ 1.08
MAP1LC3B-206ENST00000564844 GAS8O95995 478 aa21.79■■□□□ 1.08
MAP1LC3B-206ENST00000564844 MXI1P50539 228 aa21.79■■□□□ 1.08
MAP1LC3B-206ENST00000564844 LMBRD2Q68DH5 695 aaPredicted RBP21.79■■□□□ 1.08
MAP1LC3B-206ENST00000564844 RNF43Q68DV7 783 aa21.79■■□□□ 1.08
MAP1LC3B-206ENST00000564844 RHBDF2Q6PJF5 856 aa21.79■■□□□ 1.08
MAP1LC3B-206ENST00000564844 LMNTD2Q8IXW0 634 aa21.79■■□□□ 1.08
MAP1LC3B-206ENST00000564844 LRRC8CQ8TDW0 803 aa21.79■■□□□ 1.08
MAP1LC3B-206ENST00000564844 DNAJC9Q8WXX5 260 aa21.79■■□□□ 1.08
MAP1LC3B-206ENST00000564844 TRABDQ9H4I3 376 aa21.79■■□□□ 1.08
MAP1LC3B-206ENST00000564844 LRRC19Q9H756 370 aa21.79■■□□□ 1.08
MAP1LC3B-206ENST00000564844 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.79■■□□□ 1.08
MAP1LC3B-206ENST00000564844 ARHGEF35A5YM69 484 aa21.79■■□□□ 1.08
MAP1LC3B-206ENST00000564844 CPA2P48052 419 aa21.79■■□□□ 1.08
MAP1LC3B-206ENST00000564844 OTOP1Q7RTM1 612 aa21.79■■□□□ 1.08
MAP1LC3B-206ENST00000564844 PHC3Q8NDX5 983 aa21.79■■□□□ 1.08
MAP1LC3B-206ENST00000564844 PRR11Q96HE9 360 aaPredicted RBP21.79■■□□□ 1.08
MAP1LC3B-206ENST00000564844 NGLY1Q96IV0 654 aa21.79■■□□□ 1.08
MAP1LC3B-206ENST00000564844 NAP1L4Q99733 375 aaKnown RBP21.79■■□□□ 1.08
MAP1LC3B-206ENST00000564844 PAPOLBQ9NRJ5 636 aaKnown RBP21.79■■□□□ 1.08
MAP1LC3B-206ENST00000564844 WHRNQ9P202 907 aa21.79■■□□□ 1.08
MAP1LC3B-206ENST00000564844 A0A1B0GVG6 124 aa21.78■■□□□ 1.08
MAP1LC3B-206ENST00000564844 MAGEA4P43358 317 aa21.78■■□□□ 1.08
MAP1LC3B-206ENST00000564844 CYP1B1Q16678 543 aa21.78■■□□□ 1.08
MAP1LC3B-206ENST00000564844 TRAPPC3LQ5T215 181 aa21.78■■□□□ 1.08
MAP1LC3B-206ENST00000564844 SLC30A9Q6PML9 568 aa21.78■■□□□ 1.08
MAP1LC3B-206ENST00000564844 CBWD2Q8IUF1 395 aa21.78■■□□□ 1.08
MAP1LC3B-206ENST00000564844 FHDC1Q9C0D6 1143 aaPredicted RBP21.78■■□□□ 1.08
MAP1LC3B-206ENST00000564844 DBNDD1Q9H9R9 158 aa21.78■■□□□ 1.08
MAP1LC3B-206ENST00000564844 USP20Q9Y2K6 914 aa21.78■■□□□ 1.08
MAP1LC3B-206ENST00000564844 KAT6AQ92794 2004 aa21.78■■□□□ 1.08
MAP1LC3B-206ENST00000564844 LUC7L3O95232 432 aaKnown RBP21.78■■□□□ 1.08
MAP1LC3B-206ENST00000564844 IFNB1P01574 187 aa21.78■■□□□ 1.08
MAP1LC3B-206ENST00000564844 ARP10275 920 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms