RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 ZPBP2Q6X784 338 aa13.35□□□□□ -0.27
GTF3C1-204ENST00000564664 SLC44A3Q8N4M1 653 aa13.35□□□□□ -0.27
GTF3C1-204ENST00000564664 RTP3Q9BQQ7 232 aa13.35□□□□□ -0.27
GTF3C1-204ENST00000564664 TARS2Q9BW92 718 aaKnown RBP13.35□□□□□ -0.27
GTF3C1-204ENST00000564664 CDT1Q9H211 546 aa13.35□□□□□ -0.27
GTF3C1-204ENST00000564664 PLEKHA5Q9HAU0 1116 aa13.35□□□□□ -0.27
GTF3C1-204ENST00000564664 LARSQ9P2J5 1176 aaKnown RBP13.35□□□□□ -0.27
GTF3C1-204ENST00000564664 MTRRQ9UBK8 725 aa13.35□□□□□ -0.27
GTF3C1-204ENST00000564664 FBXL21Q9UKT6 434 aa13.35□□□□□ -0.27
GTF3C1-204ENST00000564664 SMC3Q9UQE7 1217 aa13.35□□□□□ -0.27
GTF3C1-204ENST00000564664 C2orf16Q68DN1 1984 aa13.34□□□□□ -0.27
GTF3C1-204ENST00000564664 PLXNA3P51805 1871 aa13.34□□□□□ -0.27
GTF3C1-204ENST00000564664 VWA3AA6NCI4 1184 aa13.34□□□□□ -0.27
GTF3C1-204ENST00000564664 ANHXE9PGG2 379 aa13.34□□□□□ -0.27
GTF3C1-204ENST00000564664 SYN3O14994 580 aa13.34□□□□□ -0.27
GTF3C1-204ENST00000564664 SLC16A4O15374 487 aa13.34□□□□□ -0.27
GTF3C1-204ENST00000564664 PLA2G4BP0C869 781 aa13.34□□□□□ -0.27
GTF3C1-204ENST00000564664 FSHRP23945 695 aa13.34□□□□□ -0.27
GTF3C1-204ENST00000564664 SLC12A3P55017 1021 aa13.34□□□□□ -0.27
GTF3C1-204ENST00000564664 KYAT1Q16773 422 aa13.34□□□□□ -0.27
GTF3C1-204ENST00000564664 AXDND1Q5T1B0 1012 aaPredicted RBP13.34□□□□□ -0.27
GTF3C1-204ENST00000564664 LARP1BQ659C4 914 aaKnown RBP13.34□□□□□ -0.27
GTF3C1-204ENST00000564664 CD300LGQ6UXG3 332 aa13.34□□□□□ -0.27
GTF3C1-204ENST00000564664 TAS1R3Q7RTX0 852 aa13.34□□□□□ -0.27
GTF3C1-204ENST00000564664 KCNK18Q7Z418 384 aa13.34□□□□□ -0.27
GTF3C1-204ENST00000564664 BRAPQ7Z569 592 aa13.34□□□□□ -0.27
GTF3C1-204ENST00000564664 GLYCTKQ8IVS8 523 aa13.34□□□□□ -0.27
GTF3C1-204ENST00000564664 TMEM161BQ8NDZ6 487 aa13.34□□□□□ -0.27
GTF3C1-204ENST00000564664 FEZF2Q8TBJ5 459 aa13.34□□□□□ -0.27
GTF3C1-204ENST00000564664 HASPINQ8TF76 798 aa13.34□□□□□ -0.27
GTF3C1-204ENST00000564664 ATOH1Q92858 354 aaPredicted RBP13.34□□□□□ -0.27
GTF3C1-204ENST00000564664 PNMA5Q96PV4 448 aa13.34□□□□□ -0.27
GTF3C1-204ENST00000564664 MYADMQ96S97 322 aa13.34□□□□□ -0.27
GTF3C1-204ENST00000564664 TSPAN18Q96SJ8 248 aa13.34□□□□□ -0.27
GTF3C1-204ENST00000564664 CXCL16Q9H2A7 254 aa13.34□□□□□ -0.27
GTF3C1-204ENST00000564664 CNTN3Q9P232 1028 aa13.34□□□□□ -0.27
GTF3C1-204ENST00000564664 CACNG4Q9UBN1 327 aa13.34□□□□□ -0.27
GTF3C1-204ENST00000564664 MAFFQ9ULX9 164 aa13.34□□□□□ -0.27
GTF3C1-204ENST00000564664 KMT2EQ8IZD2 1858 aa13.33□□□□□ -0.27
GTF3C1-204ENST00000564664 SFI1A8K8P3 1242 aa13.33□□□□□ -0.28
GTF3C1-204ENST00000564664 PROB1E7EW31 1015 aa13.33□□□□□ -0.28
GTF3C1-204ENST00000564664 H7C4K7 107 aa13.33□□□□□ -0.28
GTF3C1-204ENST00000564664 ABLIM1O14639 778 aa13.33□□□□□ -0.28
GTF3C1-204ENST00000564664 CLDN3O15551 220 aa13.33□□□□□ -0.28
GTF3C1-204ENST00000564664 C8AP07357 584 aa13.33□□□□□ -0.28
GTF3C1-204ENST00000564664 MAPTP10636 758 aaKnown RBP13.33□□□□□ -0.28
GTF3C1-204ENST00000564664 SRFP11831 508 aa13.33□□□□□ -0.28
GTF3C1-204ENST00000564664 AOC1P19801 751 aa13.33□□□□□ -0.28
GTF3C1-204ENST00000564664 OR1D2P34982 312 aa13.33□□□□□ -0.28
GTF3C1-204ENST00000564664 UBA7P41226 1012 aa13.33□□□□□ -0.28
GTF3C1-204ENST00000564664 ZRSR1Q15695 479 aaKnown RBP13.33□□□□□ -0.28
GTF3C1-204ENST00000564664 TMEM119Q4V9L6 283 aa13.33□□□□□ -0.28
GTF3C1-204ENST00000564664 TMEM105Q8N8V8 129 aa13.33□□□□□ -0.28
GTF3C1-204ENST00000564664 ZNF461Q8TAF7 563 aa13.33□□□□□ -0.28
GTF3C1-204ENST00000564664 CALML4Q96GE6 196 aa13.33□□□□□ -0.28
GTF3C1-204ENST00000564664 SNX27Q96L92 541 aa13.33□□□□□ -0.28
GTF3C1-204ENST00000564664 SMOC2Q9H3U7 446 aa13.33□□□□□ -0.28
GTF3C1-204ENST00000564664 CDH7Q9ULB5 785 aa13.33□□□□□ -0.28
GTF3C1-204ENST00000564664 KCNH3Q9ULD8 1083 aa13.33□□□□□ -0.28
GTF3C1-204ENST00000564664 ODF2LQ9ULJ1 636 aa13.33□□□□□ -0.28
GTF3C1-204ENST00000564664 PODXLO00592 558 aa13.32□□□□□ -0.28
GTF3C1-204ENST00000564664 MYBP10242 640 aa13.32□□□□□ -0.28
GTF3C1-204ENST00000564664 NPR3P17342 541 aa13.32□□□□□ -0.28
GTF3C1-204ENST00000564664 LONP1P36776 959 aaKnown RBP13.32□□□□□ -0.28
GTF3C1-204ENST00000564664 MCL1Q07820 350 aa13.32□□□□□ -0.28
GTF3C1-204ENST00000564664 NOLC1Q14978 699 aaKnown RBP eCLIP13.32□□□□□ -0.289e-10■□□□□ 10.8
GTF3C1-204ENST00000564664 GLRA4Q5JXX5 417 aa13.32□□□□□ -0.28
GTF3C1-204ENST00000564664 SLC8B1Q6J4K2 584 aa13.32□□□□□ -0.28
GTF3C1-204ENST00000564664 MTSS1LQ765P7 747 aa13.32□□□□□ -0.28
GTF3C1-204ENST00000564664 GRASPQ7Z6J2 395 aaPredicted RBP13.32□□□□□ -0.28
GTF3C1-204ENST00000564664 SIX5Q8N196 739 aa13.32□□□□□ -0.28
GTF3C1-204ENST00000564664 APPL2Q8NEU8 664 aa13.32□□□□□ -0.28
GTF3C1-204ENST00000564664 FLCNQ8NFG4 579 aa13.32□□□□□ -0.28
GTF3C1-204ENST00000564664 OXCT2Q9BYC2 517 aaPredicted RBP13.32□□□□□ -0.28
GTF3C1-204ENST00000564664 AVENQ9NQS1 362 aaPredicted RBP13.32□□□□□ -0.28
GTF3C1-204ENST00000564664 SLC2A4RGQ9NR83 387 aa13.32□□□□□ -0.28
GTF3C1-204ENST00000564664 CDY1Q9Y6F8 540 aa13.32□□□□□ -0.28
GTF3C1-204ENST00000564664 TRIP11Q15643 1979 aa13.31□□□□□ -0.28
GTF3C1-204ENST00000564664 ADAM12O43184 909 aa13.31□□□□□ -0.28
GTF3C1-204ENST00000564664 TBC1D4O60343 1298 aa13.31□□□□□ -0.28
GTF3C1-204ENST00000564664 ABLIM3O94929 683 aa13.31□□□□□ -0.28
GTF3C1-204ENST00000564664 CLTAP09496 248 aa13.31□□□□□ -0.28
GTF3C1-204ENST00000564664 PDCP20941 246 aa13.31□□□□□ -0.28
GTF3C1-204ENST00000564664 PAX3P23760 479 aa13.31□□□□□ -0.28
GTF3C1-204ENST00000564664 ELF1P32519 619 aa13.31□□□□□ -0.28
GTF3C1-204ENST00000564664 NCKAP1LP55160 1127 aa13.31□□□□□ -0.28
GTF3C1-204ENST00000564664 OSTNP61366 133 aa13.31□□□□□ -0.28
GTF3C1-204ENST00000564664 HTR4Q13639 388 aa13.31□□□□□ -0.28
GTF3C1-204ENST00000564664 MRPL58Q14197 206 aaKnown RBP13.31□□□□□ -0.28
GTF3C1-204ENST00000564664 ARSHQ5FYA8 562 aa13.31□□□□□ -0.28
GTF3C1-204ENST00000564664 TPGS2Q68CL5 300 aa13.31□□□□□ -0.28
GTF3C1-204ENST00000564664 PHLDB3Q6NSJ2 640 aa13.31□□□□□ -0.28
GTF3C1-204ENST00000564664 GET4Q7L5D6 327 aaPredicted RBP13.31□□□□□ -0.28
GTF3C1-204ENST00000564664 CEP120Q8N960 986 aa13.31□□□□□ -0.28
GTF3C1-204ENST00000564664 SLC7A14Q8TBB6 771 aa13.31□□□□□ -0.28
GTF3C1-204ENST00000564664 ZMAT2Q96NC0 199 aaKnown RBP13.31□□□□□ -0.28
GTF3C1-204ENST00000564664 TBC1D32Q96NH3 1257 aa13.31□□□□□ -0.28
GTF3C1-204ENST00000564664 NUB1Q9Y5A7 615 aa13.31□□□□□ -0.28
GTF3C1-204ENST00000564664 DOCK8Q8NF50 2099 aa13.31□□□□□ -0.28
GTF3C1-204ENST00000564664 ARHGEF37A1IGU5 675 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms