RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, human

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KARS-204	ENST00000564578	COLGALT2	Q8IYK4	626 aa		13.54	□□□□□ -0.24
KARS-204	ENST00000564578	FIBCD1	Q8N539	461 aa		13.54	□□□□□ -0.24
KARS-204	ENST00000564578	URGCP	Q8TCY9	931 aa		13.54	□□□□□ -0.24
KARS-204	ENST00000564578	C18orf25	Q96B23	403 aa	Predicted RBP	13.54	□□□□□ -0.24
KARS-204	ENST00000564578	RPS6KC1	Q96S38	1066 aa		13.54	□□□□□ -0.24
KARS-204	ENST00000564578	TSG101	Q99816	390 aa		13.54	□□□□□ -0.24
KARS-204	ENST00000564578	PAAF1	Q9BRP4	392 aa		13.54	□□□□□ -0.24
KARS-204	ENST00000564578	DNAJC25	Q9H1X3	360 aa		13.54	□□□□□ -0.24
KARS-204	ENST00000564578	NKX2-4	Q9H2Z4	354 aa		13.54	□□□□□ -0.24
KARS-204	ENST00000564578	PTPRJ	Q12913	1337 aa		13.54	□□□□□ -0.24
KARS-204	ENST00000564578	EYS	Q5T1H1	3165 aa		13.54	□□□□□ -0.24
KARS-204	ENST00000564578	IGFBP6	P24592	240 aa	Predicted RBP	13.53	□□□□□ -0.24
KARS-204	ENST00000564578	MCCD1	P59942	119 aa	Predicted RBP	13.53	□□□□□ -0.24
KARS-204	ENST00000564578	RNASEL	Q05823	741 aa	Known RBP	13.53	□□□□□ -0.24
KARS-204	ENST00000564578	PSMD6	Q15008	389 aa		13.53	□□□□□ -0.24
KARS-204	ENST00000564578	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.53	□□□□□ -0.24
KARS-204	ENST00000564578	SCARA3	Q6AZY7	606 aa		13.53	□□□□□ -0.24
KARS-204	ENST00000564578	CD302	Q8IX05	232 aa		13.53	□□□□□ -0.24
KARS-204	ENST00000564578	CSGALNACT2	Q8N6G5	542 aa		13.53	□□□□□ -0.24
KARS-204	ENST00000564578	PARD3B	Q8TEW8	1205 aa		13.53	□□□□□ -0.24
KARS-204	ENST00000564578	TIFA	Q96CG3	184 aa		13.53	□□□□□ -0.24
KARS-204	ENST00000564578	LRCH3	Q96II8	777 aa		13.53	□□□□□ -0.24
KARS-204	ENST00000564578	POP1	Q99575	1024 aa	Known RBP	13.53	□□□□□ -0.24
KARS-204	ENST00000564578	C17orf80	Q9BSJ5	609 aa		13.53	□□□□□ -0.24
KARS-204	ENST00000564578	GOLGA2P5	Q9HBQ8	144 aa		13.53	□□□□□ -0.24
KARS-204	ENST00000564578	MSRA	Q9UJ68	235 aa		13.53	□□□□□ -0.24
KARS-204	ENST00000564578	FRMD4B	Q9Y2L6	1034 aa		13.53	□□□□□ -0.24
KARS-204	ENST00000564578	ANK1	P16157	1881 aa		13.53	□□□□□ -0.24
KARS-204	ENST00000564578		F8W810	466 aa		13.52	□□□□□ -0.24
KARS-204	ENST00000564578	CETN3	O15182	167 aa		13.52	□□□□□ -0.24
KARS-204	ENST00000564578	MAPK13	O15264	365 aa		13.52	□□□□□ -0.24
KARS-204	ENST00000564578	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.52	□□□□□ -0.24
KARS-204	ENST00000564578	IL18RAP	O95256	599 aa		13.52	□□□□□ -0.24
KARS-204	ENST00000564578	DLG4	P78352	724 aa		13.52	□□□□□ -0.24
KARS-204	ENST00000564578	CLDN10	P78369	228 aa		13.52	□□□□□ -0.24
KARS-204	ENST00000564578	C1orf220	Q5T0J3	134 aa		13.52	□□□□□ -0.24
KARS-204	ENST00000564578	TMEM173	Q86WV6	379 aa	Predicted RBP	13.52	□□□□□ -0.24
KARS-204	ENST00000564578	IRF2BP1	Q8IU81	584 aa		13.52	□□□□□ -0.24
KARS-204	ENST00000564578	RABGGTA	Q92696	567 aa		13.52	□□□□□ -0.24
KARS-204	ENST00000564578	CCDC127	Q96BQ5	260 aa		13.52	□□□□□ -0.24
KARS-204	ENST00000564578	KIF12	Q96FN5	646 aa		13.52	□□□□□ -0.24
KARS-204	ENST00000564578	MKNK1	Q9BUB5	465 aa		13.52	□□□□□ -0.24
KARS-204	ENST00000564578	SRRT	Q9BXP5	876 aa	Known RBP	13.52	□□□□□ -0.24
KARS-204	ENST00000564578	TUBGCP4	Q9UGJ1	667 aa		13.52	□□□□□ -0.24
KARS-204	ENST00000564578	DACH1	Q9UI36	760 aa		13.52	□□□□□ -0.24
KARS-204	ENST00000564578	C2CD2	Q9Y426	696 aa		13.52	□□□□□ -0.24
KARS-204	ENST00000564578	MYO9B	Q13459	2157 aa		13.52	□□□□□ -0.24
KARS-204	ENST00000564578	GALT	P07902	379 aa		13.52	□□□□□ -0.25
KARS-204	ENST00000564578	CCDC192	P0DO97	292 aa		13.52	□□□□□ -0.25
KARS-204	ENST00000564578	PSMC2	P35998	433 aa	Known RBP	13.52	□□□□□ -0.25
KARS-204	ENST00000564578	SLC11A1	P49279	550 aa		13.52	□□□□□ -0.25
KARS-204	ENST00000564578	GUCY2F	P51841	1108 aa		13.52	□□□□□ -0.25
KARS-204	ENST00000564578	BCAR1	P56945	870 aa		13.52	□□□□□ -0.25
KARS-204	ENST00000564578	TUSC3	Q13454	348 aa		13.52	□□□□□ -0.25
KARS-204	ENST00000564578	ANO6	Q4KMQ2	910 aa		13.52	□□□□□ -0.25
KARS-204	ENST00000564578	HABP4	Q5JVS0	413 aa	Known RBP	13.52	□□□□□ -0.25
KARS-204	ENST00000564578	SPATA1	Q5VX52	437 aa		13.52	□□□□□ -0.25
KARS-204	ENST00000564578	FILIP1	Q7Z7B0	1213 aa		13.52	□□□□□ -0.25
KARS-204	ENST00000564578	FAM186B	Q8IYM0	893 aa		13.52	□□□□□ -0.25
KARS-204	ENST00000564578	OR5B17	Q8NGF7	314 aa		13.52	□□□□□ -0.25
KARS-204	ENST00000564578	CXorf38	Q8TB03	319 aa		13.52	□□□□□ -0.25
KARS-204	ENST00000564578	ZNF516	Q92618	1163 aa		13.52	□□□□□ -0.25
KARS-204	ENST00000564578	CEP63	Q96MT8	703 aa		13.52	□□□□□ -0.25
KARS-204	ENST00000564578	SLC28A3	Q9HAS3	691 aa		13.52	□□□□□ -0.25
KARS-204	ENST00000564578	DERA	Q9Y315	318 aa		13.52	□□□□□ -0.25
KARS-204	ENST00000564578	CASTOR2	A6NHX0	329 aa		13.51	□□□□□ -0.25
KARS-204	ENST00000564578	TDRD15	B5MCY1	1934 aa	Known RBP	13.51	□□□□□ -0.25
KARS-204	ENST00000564578	NT5C1B-RDH14	C9J2C7	533 aa		13.51	□□□□□ -0.25
KARS-204	ENST00000564578	BMPR1A	P36894	532 aa		13.51	□□□□□ -0.25
KARS-204	ENST00000564578	ERVK-21	P61565	698 aa		13.51	□□□□□ -0.25
KARS-204	ENST00000564578	TMEM132D	Q14C87	1099 aa		13.51	□□□□□ -0.25
KARS-204	ENST00000564578	PPP2R2D	Q66LE6	453 aa		13.51	□□□□□ -0.25
KARS-204	ENST00000564578	LMBRD2	Q68DH5	695 aa	Predicted RBP	13.51	□□□□□ -0.25
KARS-204	ENST00000564578	KCNT2	Q6UVM3	1135 aa		13.51	□□□□□ -0.25
KARS-204	ENST00000564578	COLGALT1	Q8NBJ5	622 aa		13.51	□□□□□ -0.25
KARS-204	ENST00000564578	ENOX1	Q8TC92	643 aa	Known RBP	13.51	□□□□□ -0.25
KARS-204	ENST00000564578	TSPAN18	Q96SJ8	248 aa		13.51	□□□□□ -0.25
KARS-204	ENST00000564578	SLC38A7	Q9NVC3	462 aa		13.51	□□□□□ -0.25
KARS-204	ENST00000564578	RALGAPA2	Q2PPJ7	1873 aa		13.51	□□□□□ -0.25
KARS-204	ENST00000564578	LRRIQ3	A6PVS8	624 aa	Predicted RBP	13.51	□□□□□ -0.25
KARS-204	ENST00000564578	NRP1	O14786	923 aa		13.51	□□□□□ -0.25
KARS-204	ENST00000564578	SLC16A3	O15427	465 aa	Known RBP	13.51	□□□□□ -0.25
KARS-204	ENST00000564578	ALDH2	P05091	517 aa		13.51	□□□□□ -0.25
KARS-204	ENST00000564578	DLAT	P10515	647 aa	Known RBP	13.51	□□□□□ -0.25
KARS-204	ENST00000564578	ALDH7A1	P49419	539 aa	Known RBP	13.51	□□□□□ -0.25
KARS-204	ENST00000564578	CLCNKB	P51801	687 aa		13.51	□□□□□ -0.25
KARS-204	ENST00000564578	BFSP1	Q12934	665 aa		13.51	□□□□□ -0.25
KARS-204	ENST00000564578	UPP1	Q16831	310 aa		13.51	□□□□□ -0.25
KARS-204	ENST00000564578	EPC2	Q52LR7	807 aa		13.51	□□□□□ -0.25
KARS-204	ENST00000564578	CD300LG	Q6UXG3	332 aa		13.51	□□□□□ -0.25
KARS-204	ENST00000564578	C3orf58	Q8NDZ4	430 aa		13.51	□□□□□ -0.25
KARS-204	ENST00000564578	TMC2	Q8TDI7	906 aa		13.51	□□□□□ -0.25
KARS-204	ENST00000564578	BCL7C	Q8WUZ0	217 aa	Predicted RBP	13.51	□□□□□ -0.25
KARS-204	ENST00000564578	TGS1	Q96RS0	853 aa	Known RBP	13.51	□□□□□ -0.25
KARS-204	ENST00000564578	TTYH1	Q9H313	450 aa	Predicted RBP	13.51	□□□□□ -0.25
KARS-204	ENST00000564578	CERS4	Q9HA82	394 aa		13.51	□□□□□ -0.25
KARS-204	ENST00000564578	INTS13	Q9NVM9	706 aa		13.51	□□□□□ -0.25
KARS-204	ENST00000564578	MTUS1	Q9ULD2	1270 aa		13.51	□□□□□ -0.25
KARS-204	ENST00000564578	UBQLN1	Q9UMX0	589 aa	Known RBP	13.51	□□□□□ -0.25
KARS-204	ENST00000564578	REV3L	O60673	3130 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms