RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 PPP2R3CQ969Q6 453 aa18.85■□□□□ 0.61
USB1-209ENST00000564387 IPO9Q96P70 1041 aaKnown RBP18.85■□□□□ 0.61
USB1-209ENST00000564387 CDCA3Q99618 268 aaPredicted RBP18.85■□□□□ 0.61
USB1-209ENST00000564387 A0A0C4DFX4 3053 aa18.85■□□□□ 0.61
USB1-209ENST00000564387 CASTOR2A6NHX0 329 aa18.84■□□□□ 0.61
USB1-209ENST00000564387 HIDE1A8MVS5 230 aa18.84■□□□□ 0.61
USB1-209ENST00000564387 LACTBL1A8MY62 500 aa18.84■□□□□ 0.61
USB1-209ENST00000564387 KIAA0391O15091 583 aaKnown RBP18.84■□□□□ 0.61
USB1-209ENST00000564387 RPN1P04843 607 aaKnown RBP18.84■□□□□ 0.61
USB1-209ENST00000564387 CYP3A5P20815 502 aa18.84■□□□□ 0.61
USB1-209ENST00000564387 ADAM15Q13444 863 aa18.84■□□□□ 0.61
USB1-209ENST00000564387 KCNB1Q14721 858 aa18.84■□□□□ 0.61
USB1-209ENST00000564387 DUSP6Q16828 381 aa18.84■□□□□ 0.61
USB1-209ENST00000564387 DCLRE1AQ6PJP8 1040 aa18.84■□□□□ 0.61
USB1-209ENST00000564387 SYCP3Q8IZU3 236 aa18.84■□□□□ 0.61
USB1-209ENST00000564387 EFHBQ8N7U6 833 aa18.84■□□□□ 0.61
USB1-209ENST00000564387 KIAA0895Q8NCT3 520 aa18.84■□□□□ 0.61
USB1-209ENST00000564387 SPATA20Q8TB22 786 aa18.84■□□□□ 0.61
USB1-209ENST00000564387 MICAL1Q8TDZ2 1067 aa18.84■□□□□ 0.61
USB1-209ENST00000564387 POMGNT1Q8WZA1 660 aa18.84■□□□□ 0.61
USB1-209ENST00000564387 HLA-CQ95604 372 aa18.84■□□□□ 0.61
USB1-209ENST00000564387 DDX27Q96GQ7 796 aaKnown RBP18.84■□□□□ 0.61
USB1-209ENST00000564387 HERC2P3Q9BVR0 1158 aa18.84■□□□□ 0.61
USB1-209ENST00000564387 GPR62Q9BZJ7 368 aa18.84■□□□□ 0.61
USB1-209ENST00000564387 ASB7Q9H672 318 aa18.84■□□□□ 0.61
USB1-209ENST00000564387 RPF1Q9H9Y2 349 aaKnown RBP18.84■□□□□ 0.61
USB1-209ENST00000564387 SLC39A2Q9NP94 309 aa18.84■□□□□ 0.61
USB1-209ENST00000564387 CACNG4Q9UBN1 327 aa18.84■□□□□ 0.61
USB1-209ENST00000564387 BRWD1Q9NSI6 2320 aa18.83■□□□□ 0.61
USB1-209ENST00000564387 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.83■□□□□ 0.6
USB1-209ENST00000564387 FSD2A1L4K1 749 aa18.83■□□□□ 0.6
USB1-209ENST00000564387 GADD45BO75293 160 aaPredicted RBP18.83■□□□□ 0.6
USB1-209ENST00000564387 KIF4AO95239 1232 aa18.83■□□□□ 0.6
USB1-209ENST00000564387 CXCL14O95715 111 aa18.83■□□□□ 0.6
USB1-209ENST00000564387 LDHAP00338 332 aaKnown RBP18.83■□□□□ 0.6
USB1-209ENST00000564387 RPL9P32969 192 aaKnown RBP18.83■□□□□ 0.6
USB1-209ENST00000564387 GTF2F1P35269 517 aaKnown RBP eCLIP18.83■□□□□ 0.6
USB1-209ENST00000564387 LTBRP36941 435 aa18.83■□□□□ 0.6
USB1-209ENST00000564387 ACOT2P49753 483 aa18.83■□□□□ 0.6
USB1-209ENST00000564387 CLCNKBP51801 687 aa18.83■□□□□ 0.6
USB1-209ENST00000564387 PTPN14Q15678 1187 aa18.83■□□□□ 0.6
USB1-209ENST00000564387 KIAA0319Q5VV43 1072 aa18.83■□□□□ 0.6
USB1-209ENST00000564387 PLPP4Q5VZY2 271 aa18.83■□□□□ 0.6
USB1-209ENST00000564387 FUT10Q6P4F1 479 aa18.83■□□□□ 0.6
USB1-209ENST00000564387 TMEM184AQ6ZMB5 413 aa18.83■□□□□ 0.6
USB1-209ENST00000564387 TAS1R1Q7RTX1 841 aa18.83■□□□□ 0.6
USB1-209ENST00000564387 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.83■□□□□ 0.6
USB1-209ENST00000564387 ATXN2LQ8WWM7 1075 aaKnown RBP18.83■□□□□ 0.6
USB1-209ENST00000564387 C18orf25Q96B23 403 aaPredicted RBP18.83■□□□□ 0.6
USB1-209ENST00000564387 FBXL18Q96ME1 805 aa18.83■□□□□ 0.6
USB1-209ENST00000564387 CBWD1Q9BRT8 395 aa18.83■□□□□ 0.6
USB1-209ENST00000564387 ENTPD7Q9NQZ7 604 aa18.83■□□□□ 0.6
USB1-209ENST00000564387 EXOC1Q9NV70 894 aa18.83■□□□□ 0.6
USB1-209ENST00000564387 CGNQ9P2M7 1197 aaKnown RBP18.83■□□□□ 0.6
USB1-209ENST00000564387 THEGQ9P2T0 379 aa18.83■□□□□ 0.6
USB1-209ENST00000564387 DERAQ9Y315 318 aa18.83■□□□□ 0.6
USB1-209ENST00000564387 SPTBN5Q9NRC6 3674 aaKnown RBP18.82■□□□□ 0.6
USB1-209ENST00000564387 ANK1P16157 1881 aa18.82■□□□□ 0.6
USB1-209ENST00000564387 IGFBP6P24592 240 aaPredicted RBP18.82■□□□□ 0.6
USB1-209ENST00000564387 LRPAP1P30533 357 aa18.82■□□□□ 0.6
USB1-209ENST00000564387 DSG1Q02413 1049 aa18.82■□□□□ 0.6
USB1-209ENST00000564387 PPP2R3AQ06190 1150 aa18.82■□□□□ 0.6
USB1-209ENST00000564387 BMS1Q14692 1282 aaKnown RBP18.82■□□□□ 0.6
USB1-209ENST00000564387 KNOP1Q1ED39 458 aaKnown RBP18.82■□□□□ 0.6
USB1-209ENST00000564387 C12orf56Q8IXR9 622 aa18.82■□□□□ 0.6
USB1-209ENST00000564387 C3orf58Q8NDZ4 430 aa18.82■□□□□ 0.6
USB1-209ENST00000564387 ZSWIM2Q8NEG5 633 aa18.82■□□□□ 0.6
USB1-209ENST00000564387 RABGGTAQ92696 567 aa18.82■□□□□ 0.6
USB1-209ENST00000564387 CCDC34Q96HJ3 373 aa18.82■□□□□ 0.6
USB1-209ENST00000564387 TLE6Q9H808 572 aa18.82■□□□□ 0.6
USB1-209ENST00000564387 UBE2ZQ9H832 354 aaPredicted RBP18.82■□□□□ 0.6
USB1-209ENST00000564387 GOLGA2P5Q9HBQ8 144 aa18.82■□□□□ 0.6
USB1-209ENST00000564387 C2CD2Q9Y426 696 aa18.82■□□□□ 0.6
USB1-209ENST00000564387 SF3B1O75533 1304 aaKnown RBP eCLIP18.81■□□□□ 0.6
USB1-209ENST00000564387 EXTL3O43909 919 aa18.81■□□□□ 0.6
USB1-209ENST00000564387 TADA2AO75478 443 aa18.81■□□□□ 0.6
USB1-209ENST00000564387 NRIP1P48552 1158 aa18.81■□□□□ 0.6
USB1-209ENST00000564387 SKIV2LQ15477 1246 aaKnown RBP18.81■□□□□ 0.6
USB1-209ENST00000564387 TPRNQ4KMQ1 711 aa18.81■□□□□ 0.6
USB1-209ENST00000564387 SPATA1Q5VX52 437 aa18.81■□□□□ 0.6
USB1-209ENST00000564387 RXFP1Q9HBX9 757 aa18.81■□□□□ 0.6
USB1-209ENST00000564387 AGPAT3Q9NRZ7 376 aa18.81■□□□□ 0.6
USB1-209ENST00000564387 UBQLN1Q9UMX0 589 aaKnown RBP18.81■□□□□ 0.6
USB1-209ENST00000564387 SSX2IPQ9Y2D8 614 aa18.81■□□□□ 0.6
USB1-209ENST00000564387 B3GAT3O94766 335 aa18.8■□□□□ 0.6
USB1-209ENST00000564387 CSPG5O95196 566 aa18.8■□□□□ 0.6
USB1-209ENST00000564387 IL18RAPO95256 599 aa18.8■□□□□ 0.6
USB1-209ENST00000564387 GLP2RO95838 553 aa18.8■□□□□ 0.6
USB1-209ENST00000564387 UBE2HP62256 183 aa18.8■□□□□ 0.6
USB1-209ENST00000564387 ELAVL2Q12926 359 aaKnown RBP18.8■□□□□ 0.6
USB1-209ENST00000564387 USP41Q3LFD5 358 aa18.8■□□□□ 0.6
USB1-209ENST00000564387 ARMCX5Q6P1M9 558 aa18.8■□□□□ 0.6
USB1-209ENST00000564387 NT5DC4Q86YG4 428 aa18.8■□□□□ 0.6
USB1-209ENST00000564387 BRSK2Q8IWQ3 736 aa18.8■□□□□ 0.6
USB1-209ENST00000564387 GPD1LQ8N335 351 aa18.8■□□□□ 0.6
USB1-209ENST00000564387 VN1R2Q8NFZ6 395 aa18.8■□□□□ 0.6
USB1-209ENST00000564387 AUTS2Q8WXX7 1259 aa18.8■□□□□ 0.6
USB1-209ENST00000564387 KIF12Q96FN5 646 aa18.8■□□□□ 0.6
USB1-209ENST00000564387 GSDMAQ96QA5 445 aa18.8■□□□□ 0.6
USB1-209ENST00000564387 FAM213AQ9BRX8 229 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms