RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 TRAK2O60296 914 aa21.83■■□□□ 1.09
SHCBP1-203ENST00000564272 RFPL2O75678 378 aa21.83■■□□□ 1.09
SHCBP1-203ENST00000564272 KCNE1P15382 129 aa21.83■■□□□ 1.09
SHCBP1-203ENST00000564272 NMT1P30419 496 aaKnown RBP21.83■■□□□ 1.09
SHCBP1-203ENST00000564272 TXLNAP40222 546 aa21.83■■□□□ 1.09
SHCBP1-203ENST00000564272 NASPP49321 788 aaPredicted RBP21.83■■□□□ 1.09
SHCBP1-203ENST00000564272 ELAVL2Q12926 359 aaKnown RBP21.83■■□□□ 1.09
SHCBP1-203ENST00000564272 PSMD5Q16401 504 aa21.83■■□□□ 1.09
SHCBP1-203ENST00000564272 KRI1Q8N9T8 703 aaKnown RBP21.83■■□□□ 1.09
SHCBP1-203ENST00000564272 LNX1Q8TBB1 728 aaPredicted RBP21.83■■□□□ 1.09
SHCBP1-203ENST00000564272 PIK3R5Q8WYR1 880 aa21.83■■□□□ 1.09
SHCBP1-203ENST00000564272 KCNN1Q92952 543 aa21.83■■□□□ 1.09
SHCBP1-203ENST00000564272 C18orf25Q96B23 403 aaPredicted RBP21.83■■□□□ 1.09
SHCBP1-203ENST00000564272 FIZ1Q96SL8 496 aa21.83■■□□□ 1.09
SHCBP1-203ENST00000564272 SLC38A7Q9NVC3 462 aa21.83■■□□□ 1.09
SHCBP1-203ENST00000564272 MORC2Q9Y6X9 1032 aaPredicted RBP21.83■■□□□ 1.09
SHCBP1-203ENST00000564272 TECTAO75443 2155 aa21.82■■□□□ 1.08
SHCBP1-203ENST00000564272 I3L4J1 428 aa21.82■■□□□ 1.08
SHCBP1-203ENST00000564272 HNRNPDLO14979 420 aaKnown RBP21.82■■□□□ 1.08
SHCBP1-203ENST00000564272 CXCL8P10145 99 aa21.82■■□□□ 1.08
SHCBP1-203ENST00000564272 BRCC3P46736 316 aa21.82■■□□□ 1.08
SHCBP1-203ENST00000564272 LIG4P49917 911 aa21.82■■□□□ 1.08
SHCBP1-203ENST00000564272 ZXDAP98168 799 aa21.82■■□□□ 1.08
SHCBP1-203ENST00000564272 SLC10A6Q3KNW5 377 aa21.82■■□□□ 1.08
SHCBP1-203ENST00000564272 RRAGBQ5VZM2 374 aa21.82■■□□□ 1.08
SHCBP1-203ENST00000564272 DCLRE1AQ6PJP8 1040 aa21.82■■□□□ 1.08
SHCBP1-203ENST00000564272 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.82■■□□□ 1.08
SHCBP1-203ENST00000564272 DYMQ7RTS9 669 aa21.82■■□□□ 1.08
SHCBP1-203ENST00000564272 TDRD5Q8NAT2 981 aaKnown RBP21.82■■□□□ 1.08
SHCBP1-203ENST00000564272 EDAQ92838 391 aa21.82■■□□□ 1.08
SHCBP1-203ENST00000564272 CLSTN3Q9BQT9 956 aa21.82■■□□□ 1.08
SHCBP1-203ENST00000564272 A0A087X0B3 334 aa21.81■■□□□ 1.08
SHCBP1-203ENST00000564272 CCDC195A0A1B0GUA6 201 aa21.81■■□□□ 1.08
SHCBP1-203ENST00000564272 PODXLO00592 558 aa21.81■■□□□ 1.08
SHCBP1-203ENST00000564272 ADAM12O43184 909 aa21.81■■□□□ 1.08
SHCBP1-203ENST00000564272 HSP90AA1P07900 732 aaKnown RBP21.81■■□□□ 1.08
SHCBP1-203ENST00000564272 FGFR3P22607 806 aa21.81■■□□□ 1.08
SHCBP1-203ENST00000564272 STK38Q15208 465 aa21.81■■□□□ 1.08
SHCBP1-203ENST00000564272 PTPN21Q16825 1174 aa21.81■■□□□ 1.08
SHCBP1-203ENST00000564272 ZBTB41Q5SVQ8 909 aa21.81■■□□□ 1.08
SHCBP1-203ENST00000564272 LILRA6Q6PI73 481 aa21.81■■□□□ 1.08
SHCBP1-203ENST00000564272 ELMSAN1Q6PJG2 1045 aa21.81■■□□□ 1.08
SHCBP1-203ENST00000564272 C15orf39Q6ZRI6 1047 aa21.81■■□□□ 1.08
SHCBP1-203ENST00000564272 TMEM130Q8N3G9 435 aa21.81■■□□□ 1.08
SHCBP1-203ENST00000564272 CMASQ8NFW8 434 aaPredicted RBP21.81■■□□□ 1.08
SHCBP1-203ENST00000564272 DPP7Q9UHL4 492 aa21.81■■□□□ 1.08
SHCBP1-203ENST00000564272 MTCL1Q9Y4B5 1905 aaKnown RBP21.8■■□□□ 1.08
SHCBP1-203ENST00000564272 MYMKA6NI61 221 aa21.8■■□□□ 1.08
SHCBP1-203ENST00000564272 PIGRP01833 764 aa21.8■■□□□ 1.08
SHCBP1-203ENST00000564272 TKTP29401 623 aaKnown RBP21.8■■□□□ 1.08
SHCBP1-203ENST00000564272 TNFSF9P41273 254 aa21.8■■□□□ 1.08
SHCBP1-203ENST00000564272 SLC39A4Q6P5W5 647 aa21.8■■□□□ 1.08
SHCBP1-203ENST00000564272 CCDC149Q6ZUS6 474 aa21.8■■□□□ 1.08
SHCBP1-203ENST00000564272 SFR1Q86XK3 245 aa21.8■■□□□ 1.08
SHCBP1-203ENST00000564272 LINC00301Q8NCQ3 95 aa21.8■■□□□ 1.08
SHCBP1-203ENST00000564272 KREMEN2Q8NCW0 462 aa21.8■■□□□ 1.08
SHCBP1-203ENST00000564272 DDX12PQ92771 950 aa21.8■■□□□ 1.08
SHCBP1-203ENST00000564272 DDX27Q96GQ7 796 aaKnown RBP21.8■■□□□ 1.08
SHCBP1-203ENST00000564272 PANK2Q9BZ23 570 aa21.8■■□□□ 1.08
SHCBP1-203ENST00000564272 TFIP11Q9UBB9 837 aaKnown RBP21.8■■□□□ 1.08
SHCBP1-203ENST00000564272 TUBGCP4Q9UGJ1 667 aa21.8■■□□□ 1.08
SHCBP1-203ENST00000564272 SCP2P22307 547 aa21.79■■□□□ 1.08
SHCBP1-203ENST00000564272 STAT6P42226 847 aa21.79■■□□□ 1.08
SHCBP1-203ENST00000564272 SPAG1Q07617 926 aa21.79■■□□□ 1.08
SHCBP1-203ENST00000564272 ZC2HC1CQ53FD0 456 aaPredicted RBP21.79■■□□□ 1.08
SHCBP1-203ENST00000564272 CCDC73Q6ZRK6 1079 aa21.79■■□□□ 1.08
SHCBP1-203ENST00000564272 HFE2Q6ZVN8 426 aa21.79■■□□□ 1.08
SHCBP1-203ENST00000564272 MAP4K3Q8IVH8 894 aa21.79■■□□□ 1.08
SHCBP1-203ENST00000564272 SPRYD3Q8NCJ5 442 aa21.79■■□□□ 1.08
SHCBP1-203ENST00000564272 HDAC7Q8WUI4 952 aa21.79■■□□□ 1.08
SHCBP1-203ENST00000564272 SMG7Q92540 1137 aaKnown RBP21.79■■□□□ 1.08
SHCBP1-203ENST00000564272 ZNF707Q96C28 371 aaPredicted RBP21.79■■□□□ 1.08
SHCBP1-203ENST00000564272 PLEKHA4Q9H4M7 779 aa21.79■■□□□ 1.08
SHCBP1-203ENST00000564272 FBXW11Q9UKB1 542 aa21.79■■□□□ 1.08
SHCBP1-203ENST00000564272 SPTLC2O15270 562 aa21.78■■□□□ 1.08
SHCBP1-203ENST00000564272 FAM189A1O60320 539 aa21.78■■□□□ 1.08
SHCBP1-203ENST00000564272 C1RP00736 705 aa21.78■■□□□ 1.08
SHCBP1-203ENST00000564272 CLTAP09496 248 aa21.78■■□□□ 1.08
SHCBP1-203ENST00000564272 GTF2BQ00403 316 aa21.78■■□□□ 1.08
SHCBP1-203ENST00000564272 FOXD4L6Q3SYB3 417 aaPredicted RBP21.78■■□□□ 1.08
SHCBP1-203ENST00000564272 PDXDC1Q6P996 788 aa21.78■■□□□ 1.08
SHCBP1-203ENST00000564272 FOXD4L3Q6VB84 417 aaPredicted RBP21.78■■□□□ 1.08
SHCBP1-203ENST00000564272 TRIM67Q6ZTA4 783 aa21.78■■□□□ 1.08
SHCBP1-203ENST00000564272 SV2BQ7L1I2 683 aa21.78■■□□□ 1.08
SHCBP1-203ENST00000564272 PDILTQ8N807 584 aa21.78■■□□□ 1.08
SHCBP1-203ENST00000564272 ZNF396Q96N95 335 aaPredicted RBP21.78■■□□□ 1.08
SHCBP1-203ENST00000564272 MSTO1Q9BUK6 570 aa21.78■■□□□ 1.08
SHCBP1-203ENST00000564272 MTRRQ9UBK8 725 aa21.78■■□□□ 1.08
SHCBP1-203ENST00000564272 USTQ9Y2C2 406 aa21.78■■□□□ 1.08
SHCBP1-203ENST00000564272 HCN4Q9Y3Q4 1203 aa21.78■■□□□ 1.08
SHCBP1-203ENST00000564272 TRIOO75962 3097 aa21.77■■□□□ 1.08
SHCBP1-203ENST00000564272 TTC26A0AVF1 554 aa21.77■■□□□ 1.08
SHCBP1-203ENST00000564272 TMEM221A6NGB7 291 aa21.77■■□□□ 1.08
SHCBP1-203ENST00000564272 TISP43B9A030 160 aa21.77■■□□□ 1.08
SHCBP1-203ENST00000564272 M0R296 226 aa21.77■■□□□ 1.08
SHCBP1-203ENST00000564272 TRAPPC3O43617 180 aa21.77■■□□□ 1.08
SHCBP1-203ENST00000564272 ASGR2P07307 311 aa21.77■■□□□ 1.08
SHCBP1-203ENST00000564272 ZSCAN22P10073 491 aaPredicted RBP21.77■■□□□ 1.08
SHCBP1-203ENST00000564272 RSPO2Q6UXX9 243 aaPredicted RBP21.77■■□□□ 1.08
SHCBP1-203ENST00000564272 ZDHHC14Q8IZN3 488 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms