RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 RAB34Q9BZG1 259 aa22.96■■□□□ 1.27
HERC2-204ENST00000563945 POLD4Q9HCU8 107 aa22.96■■□□□ 1.27
HERC2-204ENST00000563945 DLGAP2Q9P1A6 1054 aa22.96■■□□□ 1.27
HERC2-204ENST00000563945 LRWD1Q9UFC0 647 aa22.96■■□□□ 1.27
HERC2-204ENST00000563945 KIAA1024Q9UPX6 916 aa22.96■■□□□ 1.27
HERC2-204ENST00000563945 BACE2Q9Y5Z0 518 aa22.96■■□□□ 1.27
HERC2-204ENST00000563945 LAMTOR5O43504 91 aa22.95■■□□□ 1.26
HERC2-204ENST00000563945 NT5DC1Q5TFE4 455 aa22.95■■□□□ 1.26
HERC2-204ENST00000563945 FAM184AQ8NB25 1140 aa22.95■■□□□ 1.26
HERC2-204ENST00000563945 PPP1R10Q96QC0 940 aaKnown RBP22.95■■□□□ 1.26
HERC2-204ENST00000563945 SLC38A7Q9NVC3 462 aa22.95■■□□□ 1.26
HERC2-204ENST00000563945 SPATA6Q9NWH7 488 aaPredicted RBP22.95■■□□□ 1.26
HERC2-204ENST00000563945 DNMT3BQ9UBC3 853 aaKnown RBP22.95■■□□□ 1.26
HERC2-204ENST00000563945 TNFSF13BQ9Y275 285 aa22.95■■□□□ 1.26
HERC2-204ENST00000563945 DOCK6Q96HP0 2047 aa22.94■■□□□ 1.26
HERC2-204ENST00000563945 LRG1P02750 347 aa22.94■■□□□ 1.26
HERC2-204ENST00000563945 ING5Q8WYH8 240 aa22.94■■□□□ 1.26
HERC2-204ENST00000563945 KXD1Q9BQD3 176 aa22.94■■□□□ 1.26
HERC2-204ENST00000563945 TCHPQ9BT92 498 aa22.94■■□□□ 1.26
HERC2-204ENST00000563945 HCFC1R1Q9NWW0 138 aa22.94■■□□□ 1.26
HERC2-204ENST00000563945 LIMCH1Q9UPQ0 1083 aa22.94■■□□□ 1.26
HERC2-204ENST00000563945 MYO15AQ9UKN7 3530 aa22.94■■□□□ 1.26
HERC2-204ENST00000563945 PHLPP2Q6ZVD8 1323 aa22.93■■□□□ 1.26
HERC2-204ENST00000563945 SMIM28A0A1B0GU29 152 aa22.93■■□□□ 1.26
HERC2-204ENST00000563945 FAM170BA6NMN3 283 aa22.93■■□□□ 1.26
HERC2-204ENST00000563945 PRRG1O14668 218 aa22.93■■□□□ 1.26
HERC2-204ENST00000563945 NCAM2O15394 837 aa22.93■■□□□ 1.26
HERC2-204ENST00000563945 KINO60870 393 aaKnown RBP22.93■■□□□ 1.26
HERC2-204ENST00000563945 EDN1P05305 212 aa22.93■■□□□ 1.26
HERC2-204ENST00000563945 PTPN2P17706 415 aa22.93■■□□□ 1.26
HERC2-204ENST00000563945 TKTP29401 623 aaKnown RBP22.93■■□□□ 1.26
HERC2-204ENST00000563945 BRCC3P46736 316 aa22.93■■□□□ 1.26
HERC2-204ENST00000563945 OSTNP61366 133 aa22.93■■□□□ 1.26
HERC2-204ENST00000563945 UPP1Q16831 310 aa22.93■■□□□ 1.26
HERC2-204ENST00000563945 ZNF568Q3ZCX4 644 aa22.93■■□□□ 1.26
HERC2-204ENST00000563945 RSPO2Q6UXX9 243 aaPredicted RBP22.93■■□□□ 1.26
HERC2-204ENST00000563945 CCDC83Q8IWF9 413 aa22.93■■□□□ 1.26
HERC2-204ENST00000563945 KIAA2013Q8IYS2 634 aa22.93■■□□□ 1.26
HERC2-204ENST00000563945 RUBCNQ92622 972 aa22.93■■□□□ 1.26
HERC2-204ENST00000563945 MCRS1Q96EZ8 462 aa22.93■■□□□ 1.26
HERC2-204ENST00000563945 LLPHQ9BRT6 129 aaKnown RBP22.93■■□□□ 1.26
HERC2-204ENST00000563945 MRPL4Q9BYD3 311 aaKnown RBP22.93■■□□□ 1.26
HERC2-204ENST00000563945 OSBPL6Q9BZF3 934 aa22.93■■□□□ 1.26
HERC2-204ENST00000563945 GOLGA2P5Q9HBQ8 144 aa22.93■■□□□ 1.26
HERC2-204ENST00000563945 DDX19AQ9NUU7 478 aaKnown RBP22.93■■□□□ 1.26
HERC2-204ENST00000563945 GDE1Q9NZC3 331 aa22.93■■□□□ 1.26
HERC2-204ENST00000563945 DNM3Q9UQ16 869 aa22.93■■□□□ 1.26
HERC2-204ENST00000563945 NUB1Q9Y5A7 615 aa22.93■■□□□ 1.26
HERC2-204ENST00000563945 LRRN2O75325 713 aa22.92■■□□□ 1.26
HERC2-204ENST00000563945 GRM5P41594 1212 aa22.92■■□□□ 1.26
HERC2-204ENST00000563945 TRAPPC10P48553 1259 aa22.92■■□□□ 1.26
HERC2-204ENST00000563945 FXR2P51116 673 aaKnown RBP eCLIP22.92■■□□□ 1.26
HERC2-204ENST00000563945 ARPP19P56211 112 aa22.92■■□□□ 1.26
HERC2-204ENST00000563945 PEX3P56589 373 aa22.92■■□□□ 1.26
HERC2-204ENST00000563945 PDIA5Q14554 519 aa22.92■■□□□ 1.26
HERC2-204ENST00000563945 NPAS3Q8IXF0 933 aa22.92■■□□□ 1.26
HERC2-204ENST00000563945 SNX29Q8TEQ0 813 aa22.92■■□□□ 1.26
HERC2-204ENST00000563945 BORCS6Q96GS4 357 aa22.92■■□□□ 1.26
HERC2-204ENST00000563945 NELL2Q99435 816 aa22.92■■□□□ 1.26
HERC2-204ENST00000563945 H7C4K7 107 aa22.91■■□□□ 1.26
HERC2-204ENST00000563945 I3L4J1 428 aa22.91■■□□□ 1.26
HERC2-204ENST00000563945 RHOP08100 348 aa22.91■■□□□ 1.26
HERC2-204ENST00000563945 MAGEA9P43362 315 aa22.91■■□□□ 1.26
HERC2-204ENST00000563945 HMGN5P82970 282 aaKnown RBP22.91■■□□□ 1.26
HERC2-204ENST00000563945 DMP1Q13316 513 aaPredicted RBP22.91■■□□□ 1.26
HERC2-204ENST00000563945 ZBTB41Q5SVQ8 909 aa22.91■■□□□ 1.26
HERC2-204ENST00000563945 ZNF461Q8TAF7 563 aa22.91■■□□□ 1.26
HERC2-204ENST00000563945 ACAP3Q96P50 834 aa22.91■■□□□ 1.26
HERC2-204ENST00000563945 ACO2Q99798 780 aaKnown RBP22.91■■□□□ 1.26
HERC2-204ENST00000563945 MRPS17Q9Y2R5 130 aaKnown RBP22.91■■□□□ 1.26
HERC2-204ENST00000563945 RBM19Q9Y4C8 960 aaKnown RBP22.91■■□□□ 1.26
HERC2-204ENST00000563945 GLULP15104 373 aa22.9■■□□□ 1.26
HERC2-204ENST00000563945 CSTF1Q05048 431 aaKnown RBP22.9■■□□□ 1.26
HERC2-204ENST00000563945 ECM1Q16610 540 aa22.9■■□□□ 1.26
HERC2-204ENST00000563945 KRT79Q5XKE5 535 aa22.9■■□□□ 1.26
HERC2-204ENST00000563945 FBXO18Q8NFZ0 1043 aa22.9■■□□□ 1.26
HERC2-204ENST00000563945 ATRIPQ8WXE1 791 aa22.9■■□□□ 1.26
HERC2-204ENST00000563945 DRC1Q96MC2 740 aa22.9■■□□□ 1.26
HERC2-204ENST00000563945 DDX23Q9BUQ8 820 aaKnown RBP22.9■■□□□ 1.26
HERC2-204ENST00000563945 TMEM134Q9H6X4 195 aa22.9■■□□□ 1.26
HERC2-204ENST00000563945 LTB4R2Q9NPC1 389 aa22.9■■□□□ 1.26
HERC2-204ENST00000563945 KMT5AQ9NQR1 393 aa22.9■■□□□ 1.26
HERC2-204ENST00000563945 FBXO4Q9UKT5 387 aa22.9■■□□□ 1.26
HERC2-204ENST00000563945 MYH15Q9Y2K3 1946 aa22.9■■□□□ 1.26
HERC2-204ENST00000563945 CACNA1IQ9P0X4 2223 aa22.89■■□□□ 1.26
HERC2-204ENST00000563945 PODXLO00592 558 aa22.89■■□□□ 1.25
HERC2-204ENST00000563945 ZNF197O14709 1029 aa22.89■■□□□ 1.25
HERC2-204ENST00000563945 ECI2O75521 394 aa22.89■■□□□ 1.25
HERC2-204ENST00000563945 NPTX2P47972 431 aa22.89■■□□□ 1.25
HERC2-204ENST00000563945 ZNF528Q3MIS6 628 aa22.89■■□□□ 1.25
HERC2-204ENST00000563945 VARS2Q5ST30 1063 aaKnown RBP22.89■■□□□ 1.25
HERC2-204ENST00000563945 ZNF852Q6ZMS4 543 aa22.89■■□□□ 1.25
HERC2-204ENST00000563945 TPRG1Q6ZUI0 275 aa22.89■■□□□ 1.25
HERC2-204ENST00000563945 ELMOD1Q8N336 334 aa22.89■■□□□ 1.25
HERC2-204ENST00000563945 CEP120Q8N960 986 aa22.89■■□□□ 1.25
HERC2-204ENST00000563945 ZSCAN31Q96LW9 406 aaPredicted RBP22.89■■□□□ 1.25
HERC2-204ENST00000563945 CORO1BQ9BR76 489 aa22.89■■□□□ 1.25
HERC2-204ENST00000563945 CDT1Q9H211 546 aa22.89■■□□□ 1.25
HERC2-204ENST00000563945 CYP4F11Q9HBI6 524 aa22.89■■□□□ 1.25
HERC2-204ENST00000563945 VWA8A3KMH1 1905 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms