RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 ECT2Q9H8V3 914 aa11.12□□□□□ -0.63
RNF40-204ENST00000563683 SLC9A2Q9UBY0 812 aa11.12□□□□□ -0.63
RNF40-204ENST00000563683 SLC26A4O43511 780 aa11.11□□□□□ -0.63
RNF40-204ENST00000563683 SNHG28P0DPA3 235 aa11.11□□□□□ -0.63
RNF40-204ENST00000563683 RFX1P22670 979 aa11.11□□□□□ -0.63
RNF40-204ENST00000563683 GNA15P30679 374 aa11.11□□□□□ -0.63
RNF40-204ENST00000563683 KCTD2Q14681 263 aa11.11□□□□□ -0.63
RNF40-204ENST00000563683 RASGEF1CQ8N431 466 aa11.11□□□□□ -0.63
RNF40-204ENST00000563683 GLIS2Q9BZE0 524 aaPredicted RBP11.11□□□□□ -0.63
RNF40-204ENST00000563683 PABPC3Q9H361 631 aaKnown RBP11.11□□□□□ -0.63
RNF40-204ENST00000563683 TXNDC16Q9P2K2 825 aa11.11□□□□□ -0.63
RNF40-204ENST00000563683 GOLGA8MH3BSY2 632 aa11.11□□□□□ -0.63
RNF40-204ENST00000563683 DPEP1P16444 411 aa11.11□□□□□ -0.63
RNF40-204ENST00000563683 SUPT20HL1Q3ZLR7 823 aa11.11□□□□□ -0.63
RNF40-204ENST00000563683 SEZ6Q53EL9 994 aa11.11□□□□□ -0.63
RNF40-204ENST00000563683 MICALL2Q8IY33 904 aa11.11□□□□□ -0.63
RNF40-204ENST00000563683 SRRM1Q8IYB3 904 aaKnown RBP11.11□□□□□ -0.63
RNF40-204ENST00000563683 ERP44Q9BS26 406 aa11.11□□□□□ -0.63
RNF40-204ENST00000563683 ACP6Q9NPH0 428 aa11.11□□□□□ -0.63
RNF40-204ENST00000563683 ZNF302Q9NR11 478 aa11.11□□□□□ -0.63
RNF40-204ENST00000563683 PPP1R9AQ9ULJ8 1098 aa11.11□□□□□ -0.63
RNF40-204ENST00000563683 PFASO15067 1338 aa11.11□□□□□ -0.63
RNF40-204ENST00000563683 DOCK2Q92608 1830 aa11.11□□□□□ -0.63
RNF40-204ENST00000563683 EXOC1LA0A1B0GW35 172 aa11.11□□□□□ -0.63
RNF40-204ENST00000563683 FAM187AA6NFU0 413 aa11.11□□□□□ -0.63
RNF40-204ENST00000563683 NOL4O94818 638 aa11.11□□□□□ -0.63
RNF40-204ENST00000563683 ICAM1P05362 532 aa11.11□□□□□ -0.63
RNF40-204ENST00000563683 MAN1A1P33908 653 aa11.11□□□□□ -0.63
RNF40-204ENST00000563683 ERICH1Q86X53 443 aa11.11□□□□□ -0.63
RNF40-204ENST00000563683 ATXN2LQ8WWM7 1075 aaKnown RBP11.11□□□□□ -0.63
RNF40-204ENST00000563683 LPAR1Q92633 364 aa11.11□□□□□ -0.63
RNF40-204ENST00000563683 KCTD10Q9H3F6 313 aa11.11□□□□□ -0.63
RNF40-204ENST00000563683 CNOT7Q9UIV1 285 aaKnown RBP11.11□□□□□ -0.63
RNF40-204ENST00000563683 DBR1Q9UK59 544 aaKnown RBP11.11□□□□□ -0.63
RNF40-204ENST00000563683 AKT3Q9Y243 479 aa11.11□□□□□ -0.63
RNF40-204ENST00000563683 USP15Q9Y4E8 981 aaPredicted RBP11.11□□□□□ -0.63
RNF40-204ENST00000563683 BCORQ6W2J9 1755 aa11.11□□□□□ -0.63
RNF40-204ENST00000563683 ROBO3Q96MS0 1386 aa11.11□□□□□ -0.63
RNF40-204ENST00000563683 H7C0C1 242 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 ATP5OP48047 213 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 SLFN12LQ6IEE8 588 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 APLFQ8IW19 511 aaPredicted RBP11.1□□□□□ -0.63
RNF40-204ENST00000563683 BBOF1Q8ND07 529 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 C18orf8Q96DM3 657 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 PRMT1Q99873 361 aaKnown RBP11.1□□□□□ -0.63
RNF40-204ENST00000563683 WDR18Q9BV38 432 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 DEFB129Q9H1M3 183 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 BCAS3Q9H6U6 928 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 MYOZ2Q9NPC6 264 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 TOPORSQ9NS56 1045 aaPredicted RBP11.1□□□□□ -0.63
RNF40-204ENST00000563683 HOXC10Q9NYD6 342 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 WDR91A4D1P6 747 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 COPS2P61201 443 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 YWHAEP62258 255 aaKnown RBP11.1□□□□□ -0.63
RNF40-204ENST00000563683 BASP1P80723 227 aaKnown RBP11.1□□□□□ -0.63
RNF40-204ENST00000563683 KRT17Q04695 432 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 BLMHQ13867 455 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 DHX34Q14147 1143 aaKnown RBP11.1□□□□□ -0.63
RNF40-204ENST00000563683 KRT81Q14533 505 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 SLC29A2Q14542 456 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 PPP2R5DQ14738 602 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 RFX6Q8HWS3 928 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 LRRC57Q8N9N7 239 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 ETNPPLQ8TBG4 499 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 DHX38Q92620 1227 aaKnown RBP11.1□□□□□ -0.63
RNF40-204ENST00000563683 ARHGEF2Q92974 986 aaKnown RBP11.1□□□□□ -0.63
RNF40-204ENST00000563683 RAB3IPQ96QF0 476 aaPredicted RBP11.1□□□□□ -0.63
RNF40-204ENST00000563683 APOL6Q9BWW8 343 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 TMEM117Q9H0C3 514 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 DGAT1O75907 488 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 ALDH5A1P51649 535 aaPredicted RBP11.1□□□□□ -0.63
RNF40-204ENST00000563683 MTM1Q13496 603 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 FYB2Q5VWT5 728 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 FAM47EQ6ZV65 393 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 C7orf31Q8N865 590 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 DCPSQ96C86 337 aaKnown RBP11.1□□□□□ -0.63
RNF40-204ENST00000563683 ANKRD36BP1Q96IX9 119 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 CARD9Q9H257 536 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 ACAD9Q9H845 621 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 SAYSD1Q9NPB0 183 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 SLC5A4Q9NY91 659 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 PCSK1NQ9UHG2 260 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 GGT7Q9UJ14 662 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 ATP8B3O60423 1300 aa11.1□□□□□ -0.63
RNF40-204ENST00000563683 A0A0A6YYK5 440 aaPredicted RBP11.09□□□□□ -0.63
RNF40-204ENST00000563683 IGF2BP3O00425 579 aaKnown RBP eCLIP11.09□□□□□ -0.63
RNF40-204ENST00000563683 SNUPNO95149 360 aaKnown RBP11.09□□□□□ -0.63
RNF40-204ENST00000563683 RARRES1P49788 294 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 YWHAGP61981 247 aaKnown RBP eCLIP11.09□□□□□ -0.63
RNF40-204ENST00000563683 LMNB2Q03252 620 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 CDO1Q16878 200 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 BTNL9Q6UXG8 535 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 C1orf186Q6ZWK4 172 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 SLC47A2Q86VL8 602 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 SESTD1Q86VW0 696 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 RNF217Q8TC41 542 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 FBXO25Q8TCJ0 367 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 KAT5Q92993 513 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 FAM81BQ96LP2 452 aa11.09□□□□□ -0.63
RNF40-204ENST00000563683 ZNF570Q96NI8 536 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms