RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 FMO1Q01740 532 aa12.58□□□□□ -0.39
ABCA3-203ENST00000563623 MPP2Q14168 576 aa12.58□□□□□ -0.39
ABCA3-203ENST00000563623 PLA2G4FQ68DD2 849 aa12.58□□□□□ -0.39
ABCA3-203ENST00000563623 HHIPL2Q6UWX4 724 aa12.58□□□□□ -0.39
ABCA3-203ENST00000563623 VSTM1Q6UX27 236 aa12.58□□□□□ -0.39
ABCA3-203ENST00000563623 SP8Q8IXZ3 490 aa12.58□□□□□ -0.39
ABCA3-203ENST00000563623 TAS1R2Q8TE23 839 aa12.58□□□□□ -0.39
ABCA3-203ENST00000563623 TMOD2Q9NZR1 351 aa12.58□□□□□ -0.39
ABCA3-203ENST00000563623 HAO1Q9UJM8 370 aa12.58□□□□□ -0.39
ABCA3-203ENST00000563623 GTF3C4Q9UKN8 822 aa12.58□□□□□ -0.39
ABCA3-203ENST00000563623 R3HDM2Q9Y2K5 976 aaKnown RBP12.58□□□□□ -0.39
ABCA3-203ENST00000563623 ATP2A2P16615 1042 aaKnown RBP12.58□□□□□ -0.4
ABCA3-203ENST00000563623 ALDH3A1P30838 453 aa12.58□□□□□ -0.4
ABCA3-203ENST00000563623 NSFP46459 744 aaKnown RBP12.58□□□□□ -0.4
ABCA3-203ENST00000563623 RNASELQ05823 741 aaKnown RBP12.58□□□□□ -0.4
ABCA3-203ENST00000563623 CCDC6Q16204 474 aa12.58□□□□□ -0.4
ABCA3-203ENST00000563623 CKAP2Q8WWK9 683 aa12.58□□□□□ -0.4
ABCA3-203ENST00000563623 SPOCK2Q92563 424 aa12.58□□□□□ -0.4
ABCA3-203ENST00000563623 SEMA4DQ92854 862 aa12.58□□□□□ -0.4
ABCA3-203ENST00000563623 FAM198AQ9UFP1 575 aa12.58□□□□□ -0.4
ABCA3-203ENST00000563623 MRPL11Q9Y3B7 192 aaKnown RBP12.58□□□□□ -0.4
ABCA3-203ENST00000563623 ADRB2P07550 413 aa12.58□□□□□ -0.4
ABCA3-203ENST00000563623 PDHA1P08559 390 aa12.58□□□□□ -0.4
ABCA3-203ENST00000563623 HARSP12081 509 aaKnown RBP12.58□□□□□ -0.4
ABCA3-203ENST00000563623 RRM1P23921 792 aa12.58□□□□□ -0.4
ABCA3-203ENST00000563623 CCND1P24385 295 aa12.58□□□□□ -0.4
ABCA3-203ENST00000563623 JAG1P78504 1218 aa12.58□□□□□ -0.4
ABCA3-203ENST00000563623 SNRNP35Q16560 246 aaKnown RBP12.58□□□□□ -0.4
ABCA3-203ENST00000563623 OLIG1Q8TAK6 271 aa12.58□□□□□ -0.4
ABCA3-203ENST00000563623 LRRC8CQ8TDW0 803 aa12.58□□□□□ -0.4
ABCA3-203ENST00000563623 RBM15Q96T37 977 aaKnown RBP eCLIP12.58□□□□□ -0.4
ABCA3-203ENST00000563623 SYT11Q9BT88 431 aa12.58□□□□□ -0.4
ABCA3-203ENST00000563623 YIPF3Q9GZM5 350 aa12.58□□□□□ -0.4
ABCA3-203ENST00000563623 LAMB2P55268 1798 aa12.58□□□□□ -0.4
ABCA3-203ENST00000563623 XIRP1Q702N8 1843 aaKnown RBP12.58□□□□□ -0.4
ABCA3-203ENST00000563623 MAST2Q6P0Q8 1798 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 PIAS1O75925 651 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 TNNI1P19237 187 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 KRT39Q6A163 491 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 PPP1R21Q6ZMI0 780 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 MAGEC3Q8TD91 643 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 MKL1Q969V6 931 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 RAB3IPQ96QF0 476 aaPredicted RBP12.57□□□□□ -0.4
ABCA3-203ENST00000563623 TRAIPQ9BWF2 469 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 WHRNQ9P202 907 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 TTC36A6NLP5 189 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 CDH16O75309 829 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 GJB6O95452 261 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 GZMAP12544 262 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 ALAS1P13196 640 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 SOX10P56693 466 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 ZBTB16Q05516 673 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 P3H1Q32P28 736 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 SH3BP5LQ7L8J4 393 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 DAW1Q8N136 415 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 ATL2Q8NHH9 583 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 LMO3Q8TAP4 145 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 PLEKHO2Q8TD55 490 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 MORC4Q8TE76 937 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 MAIP1Q8WWC4 291 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 CRYGNQ8WXF5 182 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 RXFP1Q9HBX9 757 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 ALG13Q9NP73 1137 aaKnown RBP12.57□□□□□ -0.4
ABCA3-203ENST00000563623 SLCO1B3Q9NPD5 702 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 UVRAGQ9P2Y5 699 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 DCTN4Q9UJW0 460 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 USP20Q9Y2K6 914 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 POTEJP0CG39 1038 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 EIF2AK2P19525 551 aaKnown RBP12.57□□□□□ -0.4
ABCA3-203ENST00000563623 RAD23BP54727 409 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 CDR2Q01850 454 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 TRAF1Q13077 416 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 LRRC37BQ96QE4 947 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 CRAMP1Q96RY5 1269 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 FIZ1Q96SL8 496 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 SH3GL3Q99963 347 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 C1orf112Q9NSG2 853 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 LRRC4BQ9NT99 713 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 CCPG1Q9ULG6 757 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 SUGT1Q9Y2Z0 365 aa12.57□□□□□ -0.4
ABCA3-203ENST00000563623 MYBL1P10243 752 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 PLS3P13797 630 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 PPP2R5CQ13362 524 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 CRY2Q49AN0 593 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 FBXL13Q8NEE6 735 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 CHURC1Q8WUH1 139 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 ACSF2Q96CM8 615 aaPredicted RBP12.56□□□□□ -0.4
ABCA3-203ENST00000563623 SMC6Q96SB8 1091 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 AAASQ9NRG9 546 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 TXLNGQ9NUQ3 528 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 ZHX2Q9Y6X8 837 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 DENND3A2RUS2 1198 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 HNRNPDLO14979 420 aaKnown RBP12.56□□□□□ -0.4
ABCA3-203ENST00000563623 KRT10P13645 584 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 MAGEA4P43358 317 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 CCNHP51946 323 aaPredicted RBP12.56□□□□□ -0.4
ABCA3-203ENST00000563623 BNIP1Q12981 228 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 SLC15A2Q16348 729 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 WDR44Q5JSH3 913 aa12.56□□□□□ -0.4
ABCA3-203ENST00000563623 CAPRIN2Q6IMN6 1127 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms