RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 X6R8D5 127 aa5.34□□□□□ -1.55
CDR2-203ENST00000563573 MYH6P13533 1939 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 SH2B2O14492 632 aaPredicted RBP5.33□□□□□ -1.56
CDR2-203ENST00000563573 MEFVO15553 781 aaPredicted RBP5.33□□□□□ -1.56
CDR2-203ENST00000563573 PFKFB2O60825 505 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 CYP7B1O75881 506 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 CDKL5O76039 1030 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 TTLL1O95922 423 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 ITGB3P05106 788 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 SSBP05455 408 aaKnown RBP eCLIP5.33□□□□□ -1.56
CDR2-203ENST00000563573 PDIA3P30101 505 aaKnown RBP5.33□□□□□ -1.56
CDR2-203ENST00000563573 GNAQP50148 359 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 METAP2P50579 478 aaKnown RBP eCLIP5.33□□□□□ -1.56
CDR2-203ENST00000563573 EVCP57679 992 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 ANTXR2P58335 489 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 NKX3-2P78367 333 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 CCT2P78371 535 aaKnown RBP5.33□□□□□ -1.56
CDR2-203ENST00000563573 SMAD4Q13485 552 aaKnown RBP5.33□□□□□ -1.56
CDR2-203ENST00000563573 TESK1Q15569 626 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 ME3Q16798 604 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 INF2Q27J81 1249 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 ABCB5Q2M3G0 1257 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 ACBD5Q5T8D3 534 aaPredicted RBP5.33□□□□□ -1.56
CDR2-203ENST00000563573 MBLAC2Q68D91 279 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 TMEM179Q6ZVK1 233 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 CEP68Q76N32 757 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 MIGA2Q7L4E1 593 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 MILR1Q7Z6M3 343 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 CCDC83Q8IWF9 413 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 FAM178BQ8IXR5 827 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 FAM126BQ8IXS8 530 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 Q8N1Y9 231 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 FAM184AQ8NB25 1140 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 ANKS1AQ92625 1134 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 TMEM169Q96HH4 297 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 MAP3K14Q99558 947 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 LLPHQ9BRT6 129 aaKnown RBP5.33□□□□□ -1.56
CDR2-203ENST00000563573 YIPF4Q9BSR8 244 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 ZNF341Q9BYN7 854 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 TMEM39BQ9GZU3 492 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 EPN3Q9H201 632 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 TAF1DQ9H5J8 278 aaPredicted RBP5.33□□□□□ -1.56
CDR2-203ENST00000563573 KANSL2Q9H9L4 492 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 LY9Q9HBG7 655 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 RBM28Q9NW13 759 aaKnown RBP5.33□□□□□ -1.56
CDR2-203ENST00000563573 CLIP2Q9UDT6 1046 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 DDX60LQ5H9U9 1706 aaKnown RBP5.33□□□□□ -1.56
CDR2-203ENST00000563573 WDR90Q96KV7 1748 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 CEP350Q5VT06 3117 aa5.33□□□□□ -1.56
CDR2-203ENST00000563573 ATAD5Q96QE3 1844 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 CNTNAP1P78357 1384 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 GOLGA8AA7E2F4 631 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 GOLGA8BA8MQT2 603 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 H7BY64 318 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 SMIM22K7EJ46 135 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 CTNND1O60716 968 aaKnown RBP5.32□□□□□ -1.56
CDR2-203ENST00000563573 ASNSP08243 561 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 TOP1P11387 765 aaKnown RBP5.32□□□□□ -1.56
CDR2-203ENST00000563573 AKR1B1P15121 316 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 PDCP20941 246 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 KIF5BP33176 963 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 SHMT1P34896 483 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 MAGEA10P43363 369 aaPredicted RBP5.32□□□□□ -1.56
CDR2-203ENST00000563573 RCAN1P53805 252 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 NUCB2P80303 420 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 HMGN5P82970 282 aaKnown RBP5.32□□□□□ -1.56
CDR2-203ENST00000563573 AKAP17AQ02040 695 aaKnown RBP5.32□□□□□ -1.56
CDR2-203ENST00000563573 SSRP1Q08945 709 aaKnown RBP5.32□□□□□ -1.56
CDR2-203ENST00000563573 SEC23AQ15436 765 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 SURF1Q15526 300 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 FXNQ16595 210 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 SV2CQ496J9 727 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 TTC9BQ8N6N2 239 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 ENAHQ8N8S7 591 aaPredicted RBP5.32□□□□□ -1.56
CDR2-203ENST00000563573 NECAB1Q8N987 351 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 FANCBQ8NB91 859 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 SLC43A3Q8NBI5 491 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 SLC44A5Q8NCS7 719 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 CTCFLQ8NI51 663 aaPredicted RBP5.32□□□□□ -1.56
CDR2-203ENST00000563573 NUP133Q8WUM0 1156 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 WASF1Q92558 559 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 GTF3C6Q969F1 213 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 MKL1Q969V6 931 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 LZTS2Q9BRK4 669 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 SH2D4AQ9H788 454 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 IL17RBQ9NRM6 502 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 MTMR4Q9NYA4 1195 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 GGA3Q9NZ52 723 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 CHMP5Q9NZZ3 219 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 NYAP2Q9P242 653 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 PGAP2Q9UHJ9 254 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 DUSP10Q9Y6W6 482 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 SIPA1L1O43166 1804 aa5.32□□□□□ -1.56
CDR2-203ENST00000563573 MROH6A6NGR9 719 aa5.31□□□□□ -1.56
CDR2-203ENST00000563573 C9orf118A6NHY6 69 aa5.31□□□□□ -1.56
CDR2-203ENST00000563573 AGRPO00253 132 aa5.31□□□□□ -1.56
CDR2-203ENST00000563573 HGSO14964 777 aaPredicted RBP5.31□□□□□ -1.56
CDR2-203ENST00000563573 SMAD7O15105 426 aaKnown RBP5.31□□□□□ -1.56
CDR2-203ENST00000563573 NMT2O60551 498 aa5.31□□□□□ -1.56
CDR2-203ENST00000563573 MAFKO60675 156 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms