RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 EGR2P11161 476 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P33-201ENST00000563485 SEC24CP53992 1094 aa4.58□□□□□ -1.68
HMGB1P33-201ENST00000563485 OCA2Q04671 838 aa4.58□□□□□ -1.68
HMGB1P33-201ENST00000563485 FOXI1Q12951 378 aa4.58□□□□□ -1.68
HMGB1P33-201ENST00000563485 ABHD17BQ5VST6 288 aa4.58□□□□□ -1.68
HMGB1P33-201ENST00000563485 RNF219Q5W0B1 726 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P33-201ENST00000563485 B3GNTL1Q67FW5 361 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P33-201ENST00000563485 OTUD7BQ6GQQ9 843 aa4.58□□□□□ -1.68
HMGB1P33-201ENST00000563485 ZNF529Q6P280 563 aa4.58□□□□□ -1.68
HMGB1P33-201ENST00000563485 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.58□□□□□ -1.68
HMGB1P33-201ENST00000563485 CAVIN3Q969G5 261 aa4.58□□□□□ -1.68
HMGB1P33-201ENST00000563485 RIOX1Q9H6W3 641 aa4.58□□□□□ -1.68
HMGB1P33-201ENST00000563485 TMEM140Q9NV12 185 aa4.58□□□□□ -1.68
HMGB1P33-201ENST00000563485 RNF181Q9P0P0 153 aa4.58□□□□□ -1.68
HMGB1P33-201ENST00000563485 GPR45Q9Y5Y3 372 aa4.58□□□□□ -1.68
HMGB1P33-201ENST00000563485 AATKQ6ZMQ8 1374 aa4.57□□□□□ -1.68
HMGB1P33-201ENST00000563485 ZAR1LA6NP61 321 aa4.57□□□□□ -1.68
HMGB1P33-201ENST00000563485 K7ESF4 209 aa4.57□□□□□ -1.68
HMGB1P33-201ENST00000563485 GPR32O75388 356 aa4.57□□□□□ -1.68
HMGB1P33-201ENST00000563485 FOSP01100 380 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P33-201ENST00000563485 HKR1P10072 659 aa4.57□□□□□ -1.68
HMGB1P33-201ENST00000563485 ITGAMP11215 1152 aa4.57□□□□□ -1.68
HMGB1P33-201ENST00000563485 TYRP1P17643 537 aa4.57□□□□□ -1.68
HMGB1P33-201ENST00000563485 AGXTP21549 392 aa4.57□□□□□ -1.68
HMGB1P33-201ENST00000563485 FGFR4P22455 802 aa4.57□□□□□ -1.68
HMGB1P33-201ENST00000563485 MXRA7P84157 204 aa4.57□□□□□ -1.68
HMGB1P33-201ENST00000563485 SCAPQ12770 1279 aa4.57□□□□□ -1.68
HMGB1P33-201ENST00000563485 UBXN2BQ14CS0 331 aa4.57□□□□□ -1.68
HMGB1P33-201ENST00000563485 EGFLAMQ63HQ2 1017 aa4.57□□□□□ -1.68
HMGB1P33-201ENST00000563485 DPY19L2P1Q6NXN4 242 aa4.57□□□□□ -1.68
HMGB1P33-201ENST00000563485 SEM1Q6ZVN7 128 aa4.57□□□□□ -1.68
HMGB1P33-201ENST00000563485 UBE3BQ7Z3V4 1068 aa4.57□□□□□ -1.68
HMGB1P33-201ENST00000563485 TMEM132CQ8N3T6 1108 aa4.57□□□□□ -1.68
HMGB1P33-201ENST00000563485 ZGPATQ8N5A5 531 aaKnown RBP4.57□□□□□ -1.68
HMGB1P33-201ENST00000563485 CCHCR1Q8TD31 782 aa4.57□□□□□ -1.68
HMGB1P33-201ENST00000563485 CASKIN2Q8WXE0 1202 aa4.57□□□□□ -1.68
HMGB1P33-201ENST00000563485 DPF2Q92785 391 aa4.57□□□□□ -1.68
HMGB1P33-201ENST00000563485 RNF31Q96EP0 1072 aa4.57□□□□□ -1.68
HMGB1P33-201ENST00000563485 COQ10AQ96MF6 247 aa4.57□□□□□ -1.68
HMGB1P33-201ENST00000563485 ALOXE3Q9BYJ1 711 aa4.57□□□□□ -1.68
HMGB1P33-201ENST00000563485 REXO4Q9GZR2 422 aaKnown RBP4.57□□□□□ -1.68
HMGB1P33-201ENST00000563485 ZNF277Q9NRM2 450 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P33-201ENST00000563485 RUVBL1Q9Y265 456 aaKnown RBP4.57□□□□□ -1.68
HMGB1P33-201ENST00000563485 PRKAB1Q9Y478 270 aa4.57□□□□□ -1.68
HMGB1P33-201ENST00000563485 PCSK5Q92824 1860 aa4.57□□□□□ -1.68
HMGB1P33-201ENST00000563485 PHLDB1Q86UU1 1377 aa4.56□□□□□ -1.68
HMGB1P33-201ENST00000563485 A0A1B0GTW7 788 aa4.56□□□□□ -1.68
HMGB1P33-201ENST00000563485 FAM171A2A8MVW0 826 aa4.56□□□□□ -1.68
HMGB1P33-201ENST00000563485 KIAA0355O15063 1070 aa4.56□□□□□ -1.68
HMGB1P33-201ENST00000563485 AMY1AP04745 511 aa4.56□□□□□ -1.68
HMGB1P33-201ENST00000563485 GCSHP23434 173 aa4.56□□□□□ -1.68
HMGB1P33-201ENST00000563485 PLA2G5P39877 138 aa4.56□□□□□ -1.68
HMGB1P33-201ENST00000563485 CLK3P49761 638 aaKnown RBP4.56□□□□□ -1.68
HMGB1P33-201ENST00000563485 KLF1Q13351 362 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P33-201ENST00000563485 MTM1Q13496 603 aa4.56□□□□□ -1.68
HMGB1P33-201ENST00000563485 SPDYE7PQ495Y7 208 aa4.56□□□□□ -1.68
HMGB1P33-201ENST00000563485 ARMC6Q6NXE6 501 aa4.56□□□□□ -1.68
HMGB1P33-201ENST00000563485 GPR149Q86SP6 731 aa4.56□□□□□ -1.68
HMGB1P33-201ENST00000563485 PRIMA1Q86XR5 153 aa4.56□□□□□ -1.68
HMGB1P33-201ENST00000563485 SLC44A3Q8N4M1 653 aa4.56□□□□□ -1.68
HMGB1P33-201ENST00000563485 RNPEPQ9H4A4 650 aa4.56□□□□□ -1.68
HMGB1P33-201ENST00000563485 PRDM13Q9H4Q3 707 aa4.56□□□□□ -1.68
HMGB1P33-201ENST00000563485 FAM30AQ9NZY2 134 aa4.56□□□□□ -1.68
HMGB1P33-201ENST00000563485 USP25Q9UHP3 1055 aa4.56□□□□□ -1.68
HMGB1P33-201ENST00000563485 NOX1Q9Y5S8 564 aa4.56□□□□□ -1.68
HMGB1P33-201ENST00000563485 TEX33O43247 280 aa4.55□□□□□ -1.68
HMGB1P33-201ENST00000563485 FDXRP22570 491 aa4.55□□□□□ -1.68
HMGB1P33-201ENST00000563485 CXADRP78310 365 aa4.55□□□□□ -1.68
HMGB1P33-201ENST00000563485 BLOC1S1P78537 153 aa4.55□□□□□ -1.68
HMGB1P33-201ENST00000563485 HSD11B2P80365 405 aa4.55□□□□□ -1.68
HMGB1P33-201ENST00000563485 ATP8B2P98198 1209 aa4.55□□□□□ -1.68
HMGB1P33-201ENST00000563485 DDX42Q86XP3 938 aaKnown RBP eCLIP4.55□□□□□ -1.68
HMGB1P33-201ENST00000563485 AMOTL1Q8IY63 956 aa4.55□□□□□ -1.68
HMGB1P33-201ENST00000563485 CNTD1Q8N815 330 aa4.55□□□□□ -1.68
HMGB1P33-201ENST00000563485 PPM1NQ8N819 430 aa4.55□□□□□ -1.68
HMGB1P33-201ENST00000563485 NRG4Q8WWG1 115 aa4.55□□□□□ -1.68
HMGB1P33-201ENST00000563485 CYFIP2Q96F07 1278 aa4.55□□□□□ -1.68
HMGB1P33-201ENST00000563485 BBC3Q96PG8 261 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P33-201ENST00000563485 TESQ9UGI8 421 aaKnown RBP4.55□□□□□ -1.68
HMGB1P33-201ENST00000563485 MYBBP1AQ9BQG0 1328 aaKnown RBP4.54□□□□□ -1.68
HMGB1P33-201ENST00000563485 TCRBV7S2A1N4TA0A589 114 aa4.54□□□□□ -1.68
HMGB1P33-201ENST00000563485 CDHR4A6H8M9 788 aa4.54□□□□□ -1.68
HMGB1P33-201ENST00000563485 TRIM75PA6NK02 468 aa4.54□□□□□ -1.68
HMGB1P33-201ENST00000563485 ESRRBO95718 433 aa4.54□□□□□ -1.68
HMGB1P33-201ENST00000563485 GPANK1O95872 356 aa4.54□□□□□ -1.68
HMGB1P33-201ENST00000563485 DDCP20711 480 aa4.54□□□□□ -1.68
HMGB1P33-201ENST00000563485 MPLP40238 635 aa4.54□□□□□ -1.68
HMGB1P33-201ENST00000563485 IARSP41252 1262 aaKnown RBP4.54□□□□□ -1.68
HMGB1P33-201ENST00000563485 NOMO3P69849 1222 aa4.54□□□□□ -1.68
HMGB1P33-201ENST00000563485 MPP3Q13368 585 aa4.54□□□□□ -1.68
HMGB1P33-201ENST00000563485 CLUL1Q15846 466 aa4.54□□□□□ -1.68
HMGB1P33-201ENST00000563485 NOMO2Q5JPE7 1267 aa4.54□□□□□ -1.68
HMGB1P33-201ENST00000563485 STRIP1Q5VSL9 837 aa4.54□□□□□ -1.68
HMGB1P33-201ENST00000563485 CBARPQ8N350 705 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P33-201ENST00000563485 RAB24Q969Q5 203 aa4.54□□□□□ -1.68
HMGB1P33-201ENST00000563485 NACC2Q96BF6 587 aa4.54□□□□□ -1.68
HMGB1P33-201ENST00000563485 Q96MF0 132 aa4.54□□□□□ -1.68
HMGB1P33-201ENST00000563485 MANSC1Q9H8J5 431 aa4.54□□□□□ -1.68
HMGB1P33-201ENST00000563485 SLC5A4Q9NY91 659 aa4.54□□□□□ -1.68
HMGB1P33-201ENST00000563485 KCNE5Q9UJ90 142 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms