RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 GDF6Q6KF10 455 aaPredicted RBP19.46■□□□□ 0.71
COMMD4-208ENST00000563220 CATSPER4Q7RTX7 472 aa19.46■□□□□ 0.71
COMMD4-208ENST00000563220 EFCAB13Q8IY85 973 aa19.46■□□□□ 0.71
COMMD4-208ENST00000563220 NME8Q8N427 588 aa19.46■□□□□ 0.71
COMMD4-208ENST00000563220 SYT11Q9BT88 431 aa19.46■□□□□ 0.71
COMMD4-208ENST00000563220 MTMR12Q9C0I1 747 aa19.46■□□□□ 0.71
COMMD4-208ENST00000563220 APOBEC3GQ9HC16 384 aaKnown RBP19.46■□□□□ 0.71
COMMD4-208ENST00000563220 DDX20Q9UHI6 824 aaKnown RBP19.46■□□□□ 0.71
COMMD4-208ENST00000563220 HTTP42858 3142 aa19.46■□□□□ 0.71
COMMD4-208ENST00000563220 DDX3XO00571 662 aaKnown RBP eCLIP19.45■□□□□ 0.78e-14■■□□□ 12.4
COMMD4-208ENST00000563220 B4GALT4O60513 344 aa19.45■□□□□ 0.7
COMMD4-208ENST00000563220 CLTAP09496 248 aa19.45■□□□□ 0.7
COMMD4-208ENST00000563220 CST5P28325 142 aaPredicted RBP19.45■□□□□ 0.7
COMMD4-208ENST00000563220 AP3M2P53677 418 aa19.45■□□□□ 0.7
COMMD4-208ENST00000563220 SNX17Q15036 470 aa19.45■□□□□ 0.7
COMMD4-208ENST00000563220 DUOXA2Q1HG44 320 aa19.45■□□□□ 0.7
COMMD4-208ENST00000563220 TRAPPC11Q7Z392 1133 aa19.45■□□□□ 0.7
COMMD4-208ENST00000563220 FAM71AQ8IYT1 594 aa19.45■□□□□ 0.7
COMMD4-208ENST00000563220 SHC3Q92529 594 aa19.45■□□□□ 0.7
COMMD4-208ENST00000563220 LACTBL1A8MY62 500 aa19.45■□□□□ 0.7
COMMD4-208ENST00000563220 KRT86O43790 486 aa19.45■□□□□ 0.7
COMMD4-208ENST00000563220 PHACTR2O75167 634 aa19.45■□□□□ 0.7
COMMD4-208ENST00000563220 KIF5AQ12840 1032 aa19.45■□□□□ 0.7
COMMD4-208ENST00000563220 NCOA4Q13772 614 aa19.45■□□□□ 0.7
COMMD4-208ENST00000563220 WDR44Q5JSH3 913 aa19.45■□□□□ 0.7
COMMD4-208ENST00000563220 FMNL3Q8IVF7 1028 aa19.45■□□□□ 0.7
COMMD4-208ENST00000563220 NENFQ9UMX5 172 aa19.45■□□□□ 0.7
COMMD4-208ENST00000563220 GRIN2DO15399 1336 aa19.45■□□□□ 0.7
COMMD4-208ENST00000563220 CCDC172P0C7W6 258 aa19.44■□□□□ 0.7
COMMD4-208ENST00000563220 ANXA13P27216 316 aa19.44■□□□□ 0.7
COMMD4-208ENST00000563220 CASQ1P31415 396 aa19.44■□□□□ 0.7
COMMD4-208ENST00000563220 USP8P40818 1118 aa19.44■□□□□ 0.7
COMMD4-208ENST00000563220 TFAMQ00059 246 aaKnown RBP19.44■□□□□ 0.7
COMMD4-208ENST00000563220 GCNT1Q02742 428 aa19.44■□□□□ 0.7
COMMD4-208ENST00000563220 SLC10A6Q3KNW5 377 aa19.44■□□□□ 0.7
COMMD4-208ENST00000563220 TAF2Q6P1X5 1199 aa19.44■□□□□ 0.7
COMMD4-208ENST00000563220 SLC35F6Q8N357 371 aa19.44■□□□□ 0.7
COMMD4-208ENST00000563220 SLC30A5Q8TAD4 765 aa19.44■□□□□ 0.7
COMMD4-208ENST00000563220 LNX1Q8TBB1 728 aaPredicted RBP19.44■□□□□ 0.7
COMMD4-208ENST00000563220 DHX38Q92620 1227 aaKnown RBP19.44■□□□□ 0.7
COMMD4-208ENST00000563220 NAGPAQ9UK23 515 aa19.44■□□□□ 0.7
COMMD4-208ENST00000563220 TRIP12Q14669 1992 aaPredicted RBP19.44■□□□□ 0.7
COMMD4-208ENST00000563220 RIOK3O14730 519 aaKnown RBP19.43■□□□□ 0.7
COMMD4-208ENST00000563220 PJA2O43164 708 aa19.43■□□□□ 0.7
COMMD4-208ENST00000563220 IL18RAPO95256 599 aa19.43■□□□□ 0.7
COMMD4-208ENST00000563220 CRYBB1P53674 252 aaPredicted RBP19.43■□□□□ 0.7
COMMD4-208ENST00000563220 BMS1Q14692 1282 aaKnown RBP19.43■□□□□ 0.7
COMMD4-208ENST00000563220 FAM47CQ5HY64 1035 aa19.43■□□□□ 0.7
COMMD4-208ENST00000563220 DNAAF5Q86Y56 855 aa19.43■□□□□ 0.7
COMMD4-208ENST00000563220 WNT8BQ93098 351 aa19.43■□□□□ 0.7
COMMD4-208ENST00000563220 ARID3AQ99856 593 aa19.43■□□□□ 0.7
COMMD4-208ENST00000563220 ADPGKQ9BRR6 497 aa19.43■□□□□ 0.7
COMMD4-208ENST00000563220 PACSIN1Q9BY11 444 aa19.43■□□□□ 0.7
COMMD4-208ENST00000563220 C1orf112Q9NSG2 853 aa19.43■□□□□ 0.7
COMMD4-208ENST00000563220 SAGE1Q9NXZ1 904 aa19.43■□□□□ 0.7
COMMD4-208ENST00000563220 SCN10AQ9Y5Y9 1956 aa19.43■□□□□ 0.7
COMMD4-208ENST00000563220 CYP26A1O43174 497 aa19.43■□□□□ 0.7
COMMD4-208ENST00000563220 SGPL1O95470 568 aa19.43■□□□□ 0.7
COMMD4-208ENST00000563220 NPTXRO95502 500 aa19.43■□□□□ 0.7
COMMD4-208ENST00000563220 INHAP05111 366 aa19.43■□□□□ 0.7
COMMD4-208ENST00000563220 POU5F1Q01860 360 aaKnown RBP19.43■□□□□ 0.7
COMMD4-208ENST00000563220 NCBP1Q09161 790 aaKnown RBP19.43■□□□□ 0.7
COMMD4-208ENST00000563220 PCBP1Q15365 356 aaKnown RBP eCLIP19.43■□□□□ 0.7
COMMD4-208ENST00000563220 ALKBH5Q6P6C2 394 aaKnown RBP19.43■□□□□ 0.7
COMMD4-208ENST00000563220 ENOSF1Q7L5Y1 443 aa19.43■□□□□ 0.7
COMMD4-208ENST00000563220 GLYCTKQ8IVS8 523 aa19.43■□□□□ 0.7
COMMD4-208ENST00000563220 EIF2AQ9BY44 585 aaKnown RBP19.43■□□□□ 0.7
COMMD4-208ENST00000563220 TSGA10Q9BZW7 698 aa19.43■□□□□ 0.7
COMMD4-208ENST00000563220 ACP6Q9NPH0 428 aa19.43■□□□□ 0.7
COMMD4-208ENST00000563220 MYO1AQ9UBC5 1043 aa19.43■□□□□ 0.7
COMMD4-208ENST00000563220 NUB1Q9Y5A7 615 aa19.43■□□□□ 0.7
COMMD4-208ENST00000563220 NFICP08651 508 aa19.42■□□□□ 0.7
COMMD4-208ENST00000563220 NAB2Q15742 525 aa19.42■□□□□ 0.7
COMMD4-208ENST00000563220 KYAT1Q16773 422 aa19.42■□□□□ 0.7
COMMD4-208ENST00000563220 UMODL1Q5DID0 1318 aa19.42■□□□□ 0.7
COMMD4-208ENST00000563220 VPS36Q86VN1 386 aa19.42■□□□□ 0.7
COMMD4-208ENST00000563220 TMEM130Q8N3G9 435 aa19.42■□□□□ 0.7
COMMD4-208ENST00000563220 PCSK9Q8NBP7 692 aaKnown RBP19.42■□□□□ 0.7
COMMD4-208ENST00000563220 SLC20A1Q8WUM9 679 aa19.42■□□□□ 0.7
COMMD4-208ENST00000563220 CELF4Q9BZC1 486 aaKnown RBP19.42■□□□□ 0.7
COMMD4-208ENST00000563220 SALL4Q9UJQ4 1053 aa19.42■□□□□ 0.7
COMMD4-208ENST00000563220 TSKSQ9UJT2 592 aa19.42■□□□□ 0.7
COMMD4-208ENST00000563220 MACROD2A1Z1Q3 448 aa19.41■□□□□ 0.7
COMMD4-208ENST00000563220 TMEM191BP0C7N4 346 aa19.41■□□□□ 0.7
COMMD4-208ENST00000563220 GRM5P41594 1212 aa19.41■□□□□ 0.7
COMMD4-208ENST00000563220 MYL6P60660 151 aa19.41■□□□□ 0.7
COMMD4-208ENST00000563220 NOP14P78316 857 aaKnown RBP19.41■□□□□ 0.7
COMMD4-208ENST00000563220 DCAF4L1Q3SXM0 396 aa19.41■□□□□ 0.7
COMMD4-208ENST00000563220 JADE1Q6IE81 842 aa19.41■□□□□ 0.7
COMMD4-208ENST00000563220 NOTUMQ6P988 496 aa19.41■□□□□ 0.7
COMMD4-208ENST00000563220 SLC27A1Q6PCB7 646 aa19.41■□□□□ 0.7
COMMD4-208ENST00000563220 SESTD1Q86VW0 696 aa19.41■□□□□ 0.7
COMMD4-208ENST00000563220 U2AF1L4Q8WU68 220 aaKnown RBP19.41■□□□□ 0.7
COMMD4-208ENST00000563220 ANKRD36BP1Q96IX9 119 aa19.41■□□□□ 0.7
COMMD4-208ENST00000563220 ACAP3Q96P50 834 aa19.41■□□□□ 0.7
COMMD4-208ENST00000563220 AGPAT1Q99943 283 aa19.41■□□□□ 0.7
COMMD4-208ENST00000563220 MROH7Q68CQ1 1323 aa19.41■□□□□ 0.7
COMMD4-208ENST00000563220 ASS1P00966 412 aaKnown RBP19.41■□□□□ 0.7
COMMD4-208ENST00000563220 ARHGEF6Q15052 776 aa19.41■□□□□ 0.7
COMMD4-208ENST00000563220 LHX8Q68G74 356 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms