RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 ZSCAN22P10073 491 aaPredicted RBP12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 CXCL8P10145 99 aa12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 GTF2BQ00403 316 aa12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 ITIH3Q06033 890 aa12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 STK38Q15208 465 aa12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 HERC4Q5GLZ8 1057 aaPredicted RBP12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 RRAGBQ5VZM2 374 aa12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 KIAA1841Q6NSI8 718 aa12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 LILRA6Q6PI73 481 aa12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 RSPO2Q6UXX9 243 aaPredicted RBP12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 PPFIBP1Q86W92 1011 aa12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 SFR1Q86XK3 245 aa12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 CEP57Q86XR8 500 aa12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 PDILTQ8N807 584 aa12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 KRI1Q8N9T8 703 aaKnown RBP12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 TMEM87AQ8NBN3 555 aa12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 DDX12PQ92771 950 aa12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 ACAP3Q96P50 834 aa12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 C1QTNF1Q9BXJ1 281 aa12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 FGFBP2Q9BYJ0 223 aa12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 DZANK1Q9NVP4 752 aa12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 CNTN3Q9P232 1028 aa12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 STK17AQ9UEE5 414 aa12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 STK39Q9UEW8 545 aa12.13□□□□□ -0.47
LPCAT4-202ENST00000562404 SPTLC2O15270 562 aa12.12□□□□□ -0.47
LPCAT4-202ENST00000562404 CLDN3O15551 220 aa12.12□□□□□ -0.47
LPCAT4-202ENST00000562404 B3GAT3O94766 335 aa12.12□□□□□ -0.47
LPCAT4-202ENST00000562404 F13A1P00488 732 aa12.12□□□□□ -0.47
LPCAT4-202ENST00000562404 ADH1AP07327 375 aa12.12□□□□□ -0.47
LPCAT4-202ENST00000562404 KCNE1P15382 129 aa12.12□□□□□ -0.47
LPCAT4-202ENST00000562404 COL9A1P20849 921 aa12.12□□□□□ -0.47
LPCAT4-202ENST00000562404 YARSP54577 528 aaKnown RBP12.12□□□□□ -0.47
LPCAT4-202ENST00000562404 KCNA1Q09470 495 aa12.12□□□□□ -0.47
LPCAT4-202ENST00000562404 E2F4Q16254 413 aa12.12□□□□□ -0.47
LPCAT4-202ENST00000562404 TMEM31Q5JXX7 168 aa12.12□□□□□ -0.47
LPCAT4-202ENST00000562404 AXDND1Q5T1B0 1012 aaPredicted RBP12.12□□□□□ -0.47
LPCAT4-202ENST00000562404 CES5AQ6NT32 575 aa12.12□□□□□ -0.47
LPCAT4-202ENST00000562404 SHC4Q6S5L8 630 aa12.12□□□□□ -0.47
LPCAT4-202ENST00000562404 GPR149Q86SP6 731 aa12.12□□□□□ -0.47
LPCAT4-202ENST00000562404 PIK3R5Q8WYR1 880 aa12.12□□□□□ -0.47
LPCAT4-202ENST00000562404 STAMQ92783 540 aa12.12□□□□□ -0.47
LPCAT4-202ENST00000562404 BICD1Q96G01 975 aa12.12□□□□□ -0.47
LPCAT4-202ENST00000562404 TTPALQ9BTX7 342 aa12.12□□□□□ -0.47
LPCAT4-202ENST00000562404 STRA6Q9BX79 667 aa12.12□□□□□ -0.47
LPCAT4-202ENST00000562404 SFXN1Q9H9B4 322 aa12.12□□□□□ -0.47
LPCAT4-202ENST00000562404 TOPORSQ9NS56 1045 aaPredicted RBP12.12□□□□□ -0.47
LPCAT4-202ENST00000562404 FNIP2Q9P278 1114 aa12.12□□□□□ -0.47
LPCAT4-202ENST00000562404 CCDC39Q9UFE4 941 aa12.12□□□□□ -0.47
LPCAT4-202ENST00000562404 TUBGCP4Q9UGJ1 667 aa12.12□□□□□ -0.47
LPCAT4-202ENST00000562404 SSX2IPQ9Y2D8 614 aa12.12□□□□□ -0.47
LPCAT4-202ENST00000562404 ZDHHC9Q9Y397 364 aa12.12□□□□□ -0.47
LPCAT4-202ENST00000562404 ZNF318Q5VUA4 2279 aa12.11□□□□□ -0.47
LPCAT4-202ENST00000562404 CCDC195A0A1B0GUA6 201 aa12.11□□□□□ -0.47
LPCAT4-202ENST00000562404 TTC26A0AVF1 554 aa12.11□□□□□ -0.47
LPCAT4-202ENST00000562404 HNRNPDLO14979 420 aaKnown RBP12.11□□□□□ -0.47
LPCAT4-202ENST00000562404 N4BP1O75113 896 aaKnown RBP12.11□□□□□ -0.47
LPCAT4-202ENST00000562404 PPP6R2O75170 966 aa12.11□□□□□ -0.47
LPCAT4-202ENST00000562404 TBCAO75347 108 aaKnown RBP12.11□□□□□ -0.47
LPCAT4-202ENST00000562404 PPP1R37O75864 691 aa12.11□□□□□ -0.47
LPCAT4-202ENST00000562404 GLUD1P00367 558 aa12.11□□□□□ -0.47
LPCAT4-202ENST00000562404 ALADP13716 330 aa12.11□□□□□ -0.47
LPCAT4-202ENST00000562404 FGFR3P22607 806 aa12.11□□□□□ -0.47
LPCAT4-202ENST00000562404 TKTP29401 623 aaKnown RBP12.11□□□□□ -0.47
LPCAT4-202ENST00000562404 LIG4P49917 911 aa12.11□□□□□ -0.47
LPCAT4-202ENST00000562404 GUCY2FP51841 1108 aa12.11□□□□□ -0.47
LPCAT4-202ENST00000562404 CASP5P51878 434 aa12.11□□□□□ -0.47
LPCAT4-202ENST00000562404 ENOX2Q16206 610 aaKnown RBP12.11□□□□□ -0.47
LPCAT4-202ENST00000562404 PSMD5Q16401 504 aa12.11□□□□□ -0.47
LPCAT4-202ENST00000562404 DCLRE1AQ6PJP8 1040 aa12.11□□□□□ -0.47
LPCAT4-202ENST00000562404 SV2BQ7L1I2 683 aa12.11□□□□□ -0.47
LPCAT4-202ENST00000562404 ZNF720Q7Z2F6 126 aa12.11□□□□□ -0.47
LPCAT4-202ENST00000562404 APBB1IPQ7Z5R6 666 aaPredicted RBP12.11□□□□□ -0.47
LPCAT4-202ENST00000562404 MAP4K3Q8IVH8 894 aa12.11□□□□□ -0.47
LPCAT4-202ENST00000562404 GPR65Q8IYL9 337 aa12.11□□□□□ -0.47
LPCAT4-202ENST00000562404 ZSWIM2Q8NEG5 633 aa12.11□□□□□ -0.47
LPCAT4-202ENST00000562404 ZNF707Q96C28 371 aaPredicted RBP12.11□□□□□ -0.47
LPCAT4-202ENST00000562404 DDX27Q96GQ7 796 aaKnown RBP12.11□□□□□ -0.47
LPCAT4-202ENST00000562404 SMOC2Q9H3U7 446 aa12.11□□□□□ -0.47
LPCAT4-202ENST00000562404 TSHZ2Q9NRE2 1034 aa12.11□□□□□ -0.47
LPCAT4-202ENST00000562404 TBC1D7Q9P0N9 293 aa12.11□□□□□ -0.47
LPCAT4-202ENST00000562404 KCNG1Q9UIX4 513 aa12.11□□□□□ -0.47
LPCAT4-202ENST00000562404 TSC2P49815 1807 aa12.11□□□□□ -0.47
LPCAT4-202ENST00000562404 A0A0B4J269 797 aa12.1□□□□□ -0.47
LPCAT4-202ENST00000562404 FRMD3A2A2Y4 597 aa12.1□□□□□ -0.47
LPCAT4-202ENST00000562404 LACTBL1A8MY62 500 aa12.1□□□□□ -0.47
LPCAT4-202ENST00000562404 H0YCG3 227 aa12.1□□□□□ -0.47
LPCAT4-202ENST00000562404 PODXLO00592 558 aa12.1□□□□□ -0.47
LPCAT4-202ENST00000562404 PPEF2O14830 753 aa12.1□□□□□ -0.47
LPCAT4-202ENST00000562404 YEATS4O95619 227 aa12.1□□□□□ -0.47
LPCAT4-202ENST00000562404 ADSSP30520 456 aa12.1□□□□□ -0.47
LPCAT4-202ENST00000562404 STAT6P42226 847 aa12.1□□□□□ -0.47
LPCAT4-202ENST00000562404 MTHFRP42898 656 aa12.1□□□□□ -0.47
LPCAT4-202ENST00000562404 MATR3P43243 847 aaKnown RBP eCLIP12.1□□□□□ -0.47
LPCAT4-202ENST00000562404 DNM1Q05193 864 aaKnown RBP12.1□□□□□ -0.47
LPCAT4-202ENST00000562404 ZBTB6Q15916 424 aa12.1□□□□□ -0.47
LPCAT4-202ENST00000562404 ATAT1Q5SQI0 421 aa12.1□□□□□ -0.47
LPCAT4-202ENST00000562404 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.1□□□□□ -0.47
LPCAT4-202ENST00000562404 CCDC73Q6ZRK6 1079 aa12.1□□□□□ -0.47
LPCAT4-202ENST00000562404 GLIS3Q8NEA6 775 aa12.1□□□□□ -0.47
LPCAT4-202ENST00000562404 HPS3Q969F9 1004 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms