RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 CYP4F22Q6NT55 531 aa14.89□□□□□ -0.03
VPS9D1-202ENST00000561976 EP400NLQ6ZTU2 488 aa14.89□□□□□ -0.03
VPS9D1-202ENST00000561976 HAUS6Q7Z4H7 955 aa14.89□□□□□ -0.03
VPS9D1-202ENST00000561976 ANKRD35Q8N283 1001 aa14.89□□□□□ -0.03
VPS9D1-202ENST00000561976 ATL2Q8NHH9 583 aa14.89□□□□□ -0.03
VPS9D1-202ENST00000561976 KCNV2Q8TDN2 545 aa14.89□□□□□ -0.03
VPS9D1-202ENST00000561976 DHX38Q92620 1227 aaKnown RBP14.89□□□□□ -0.03
VPS9D1-202ENST00000561976 RAB3IPQ96QF0 476 aaPredicted RBP14.89□□□□□ -0.03
VPS9D1-202ENST00000561976 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.89□□□□□ -0.03
VPS9D1-202ENST00000561976 TOM1O60784 492 aa14.88□□□□□ -0.03
VPS9D1-202ENST00000561976 UNC5CO95185 931 aa14.88□□□□□ -0.03
VPS9D1-202ENST00000561976 CALCAP01258 141 aa14.88□□□□□ -0.03
VPS9D1-202ENST00000561976 ADRB2P07550 413 aa14.88□□□□□ -0.03
VPS9D1-202ENST00000561976 ADRA2BP18089 450 aa14.88□□□□□ -0.03
VPS9D1-202ENST00000561976 TAC1P20366 129 aa14.88□□□□□ -0.03
VPS9D1-202ENST00000561976 SETDB1Q15047 1291 aa14.88□□□□□ -0.03
VPS9D1-202ENST00000561976 CBWD2Q8IUF1 395 aa14.88□□□□□ -0.03
VPS9D1-202ENST00000561976 MICAL1Q8TDZ2 1067 aa14.88□□□□□ -0.03
VPS9D1-202ENST00000561976 GRAMD1AQ96CP6 724 aa14.88□□□□□ -0.03
VPS9D1-202ENST00000561976 NT5C1BQ96P26 610 aa14.88□□□□□ -0.03
VPS9D1-202ENST00000561976 HERPUD2Q9BSE4 406 aa14.88□□□□□ -0.03
VPS9D1-202ENST00000561976 R3HDM2Q9Y2K5 976 aaKnown RBP14.88□□□□□ -0.03
VPS9D1-202ENST00000561976 ADGRA3Q8IWK6 1321 aa14.88□□□□□ -0.03
VPS9D1-202ENST00000561976 SLC16A4O15374 487 aa14.88□□□□□ -0.03
VPS9D1-202ENST00000561976 PLS3P13797 630 aa14.88□□□□□ -0.03
VPS9D1-202ENST00000561976 FOXN2P32314 431 aa14.88□□□□□ -0.03
VPS9D1-202ENST00000561976 ECE1P42892 770 aa14.88□□□□□ -0.03
VPS9D1-202ENST00000561976 KRT39Q6A163 491 aa14.88□□□□□ -0.03
VPS9D1-202ENST00000561976 SPDL1Q96EA4 605 aa14.88□□□□□ -0.03
VPS9D1-202ENST00000561976 SAAL1Q96ER3 474 aa14.88□□□□□ -0.03
VPS9D1-202ENST00000561976 LRRC4BQ9NT99 713 aa14.88□□□□□ -0.03
VPS9D1-202ENST00000561976 TXLNGQ9NUQ3 528 aa14.88□□□□□ -0.03
VPS9D1-202ENST00000561976 SORBS3O60504 671 aa14.87□□□□□ -0.03
VPS9D1-202ENST00000561976 SPAG7O75391 227 aa14.87□□□□□ -0.03
VPS9D1-202ENST00000561976 TCEA3O75764 348 aa14.87□□□□□ -0.03
VPS9D1-202ENST00000561976 VIL1P09327 827 aaKnown RBP14.87□□□□□ -0.03
VPS9D1-202ENST00000561976 PEX3P56589 373 aa14.87□□□□□ -0.03
VPS9D1-202ENST00000561976 STAT4Q14765 748 aa14.87□□□□□ -0.03
VPS9D1-202ENST00000561976 ANKRD20A2Q5SQ80 823 aa14.87□□□□□ -0.03
VPS9D1-202ENST00000561976 ANKRD20A1Q5TYW2 823 aa14.87□□□□□ -0.03
VPS9D1-202ENST00000561976 ANKRD20A3Q5VUR7 823 aa14.87□□□□□ -0.03
VPS9D1-202ENST00000561976 IZUMO3Q5VZ72 239 aa14.87□□□□□ -0.03
VPS9D1-202ENST00000561976 GSTA5Q7RTV2 222 aa14.87□□□□□ -0.03
VPS9D1-202ENST00000561976 C12orf56Q8IXR9 622 aa14.87□□□□□ -0.03
VPS9D1-202ENST00000561976 SLC5A4Q9NY91 659 aa14.87□□□□□ -0.03
VPS9D1-202ENST00000561976 LGALS13Q9UHV8 139 aa14.87□□□□□ -0.03
VPS9D1-202ENST00000561976 FAM47DPA6NHR8 397 aa14.87□□□□□ -0.03
VPS9D1-202ENST00000561976 CCNB1P14635 433 aa14.87□□□□□ -0.03
VPS9D1-202ENST00000561976 RRM1P23921 792 aa14.87□□□□□ -0.03
VPS9D1-202ENST00000561976 VPS72Q15906 364 aa14.87□□□□□ -0.03
VPS9D1-202ENST00000561976 SNRNP35Q16560 246 aaKnown RBP14.87□□□□□ -0.03
VPS9D1-202ENST00000561976 DAB2IPQ5VWQ8 1189 aa14.87□□□□□ -0.03
VPS9D1-202ENST00000561976 PRUNE1Q86TP1 453 aa14.87□□□□□ -0.03
VPS9D1-202ENST00000561976 IDI2Q9BXS1 227 aa14.87□□□□□ -0.03
VPS9D1-202ENST00000561976 TMX4Q9H1E5 349 aaPredicted RBP14.87□□□□□ -0.03
VPS9D1-202ENST00000561976 RALAP11233 206 aa14.86□□□□□ -0.03
VPS9D1-202ENST00000561976 GJC1P36383 396 aa14.86□□□□□ -0.03
VPS9D1-202ENST00000561976 SKIV2L2P42285 1042 aaKnown RBP14.86□□□□□ -0.03
VPS9D1-202ENST00000561976 SSR1P43307 286 aaKnown RBP14.86□□□□□ -0.03
VPS9D1-202ENST00000561976 DNAJC3Q13217 504 aa14.86□□□□□ -0.03
VPS9D1-202ENST00000561976 CLEC16AQ2KHT3 1053 aa14.86□□□□□ -0.03
VPS9D1-202ENST00000561976 C2CD6Q53TS8 623 aa14.86□□□□□ -0.03
VPS9D1-202ENST00000561976 CCDC89Q8N998 374 aa14.86□□□□□ -0.03
VPS9D1-202ENST00000561976 HELQQ8TDG4 1101 aa14.86□□□□□ -0.03
VPS9D1-202ENST00000561976 ERP27Q96DN0 273 aa14.86□□□□□ -0.03
VPS9D1-202ENST00000561976 MYLK2Q9H1R3 596 aa14.86□□□□□ -0.03
VPS9D1-202ENST00000561976 MRPL11Q9Y3B7 192 aaKnown RBP14.86□□□□□ -0.03
VPS9D1-202ENST00000561976 P4HBP07237 508 aaKnown RBP14.86□□□□□ -0.03
VPS9D1-202ENST00000561976 MAPTP10636 758 aaKnown RBP14.86□□□□□ -0.03
VPS9D1-202ENST00000561976 ACVR2BQ13705 512 aa14.86□□□□□ -0.03
VPS9D1-202ENST00000561976 TAF11Q15544 211 aa14.86□□□□□ -0.03
VPS9D1-202ENST00000561976 BBOF1Q8ND07 529 aa14.86□□□□□ -0.03
VPS9D1-202ENST00000561976 CPA5Q8WXQ8 436 aa14.86□□□□□ -0.03
VPS9D1-202ENST00000561976 GPRC5CQ9NQ84 441 aa14.86□□□□□ -0.03
VPS9D1-202ENST00000561976 TOPORSQ9NS56 1045 aaPredicted RBP14.86□□□□□ -0.03
VPS9D1-202ENST00000561976 ZHX2Q9Y6X8 837 aa14.86□□□□□ -0.03
VPS9D1-202ENST00000561976 EXOC1LA0A1B0GW35 172 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 TARSP26639 723 aaKnown RBP14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 GCKP35557 465 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 RARRES1P49788 294 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 CCDC15Q0P6D6 951 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 ANKLE1Q8NAG6 615 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 FBXL13Q8NEE6 735 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 TAS1R2Q8TE23 839 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 DDX1Q92499 740 aaKnown RBP14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 RBM15Q96T37 977 aaKnown RBP eCLIP14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 RIT2Q99578 217 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 RAB20Q9NX57 234 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 QSER1Q2KHR3 1735 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 TAF1LQ8IZX4 1826 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 TMEM150BA6NC51 233 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 POC1B-GALNT4F8VUJ3 575 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 MAPK13O15264 365 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 MAGEA4P43358 317 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 WDR4P57081 412 aaKnown RBP14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 LLGL2Q6P1M3 1020 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 SLC17A8Q8NDX2 589 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 CNKSR1Q969H4 720 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 ZNF622Q969S3 477 aaKnown RBP eCLIP14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 TMEM237Q96Q45 408 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms