RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 RAP2BP61225 183 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 SCAPQ12770 1279 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 UBXN2BQ14CS0 331 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 PTPAQ15257 358 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 PCBP2Q15366 365 aaKnown RBP eCLIP3.19□□□□□ -1.97e-7■■■■■ 31
CHD9-204ENST00000561869 RNF187Q5TA31 235 aaPredicted RBP3.19□□□□□ -1.9
CHD9-204ENST00000561869 B3GNTL1Q67FW5 361 aaPredicted RBP3.19□□□□□ -1.9
CHD9-204ENST00000561869 PGM2L1Q6PCE3 622 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 KCNV1Q6PIU1 500 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 MED25Q71SY5 747 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 ZNF575Q86XF7 245 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 DRC7Q8IY82 874 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 PPM1NQ8N819 430 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 PRPF38AQ8NAV1 312 aaKnown RBP3.19□□□□□ -1.9
CHD9-204ENST00000561869 CPEB3Q8NE35 698 aaKnown RBP3.19□□□□□ -1.9
CHD9-204ENST00000561869 OR56A1Q8NGH5 318 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 GPR150Q8NGU9 434 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 CCHCR1Q8TD31 782 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 CYFIP2Q96F07 1278 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 WDR11Q9BZH6 1224 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 SERHL2Q9H4I8 314 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 SYBUQ9NX95 663 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 MOCS1Q9NZB8 636 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 ANKFY1Q9P2R3 1169 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 ZBTB21Q9ULJ3 1066 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 DNM3Q9UQ16 869 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 MAP3K2Q9Y2U5 619 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 FPGT-TNNI3KV9GXZ4 949 aa3.19□□□□□ -1.9
CHD9-204ENST00000561869 PIPSLA2A3N6 862 aa3.18□□□□□ -1.9
CHD9-204ENST00000561869 NDUFS2O75306 463 aa3.18□□□□□ -1.9
CHD9-204ENST00000561869 GPR32O75388 356 aa3.18□□□□□ -1.9
CHD9-204ENST00000561869 SPDEFO95238 335 aa3.18□□□□□ -1.9
CHD9-204ENST00000561869 POMCP01189 267 aa3.18□□□□□ -1.9
CHD9-204ENST00000561869 DDCP20711 480 aa3.18□□□□□ -1.9
CHD9-204ENST00000561869 GCSHP23434 173 aa3.18□□□□□ -1.9
CHD9-204ENST00000561869 DDX6P26196 483 aaKnown RBP eCLIP3.18□□□□□ -1.9
CHD9-204ENST00000561869 EVA1CP58658 441 aa3.18□□□□□ -1.9
CHD9-204ENST00000561869 KRT85P78386 507 aa3.18□□□□□ -1.9
CHD9-204ENST00000561869 OCA2Q04671 838 aa3.18□□□□□ -1.9
CHD9-204ENST00000561869 RESTQ13127 1097 aa3.18□□□□□ -1.9
CHD9-204ENST00000561869 TARDBPQ13148 414 aaKnown RBP eCLIP3.18□□□□□ -1.91e-11■■■■■ 40.5
CHD9-204ENST00000561869 TP53BP2Q13625 1128 aa3.18□□□□□ -1.9
CHD9-204ENST00000561869 ODF1Q14990 250 aa3.18□□□□□ -1.9
CHD9-204ENST00000561869 ABCB5Q2M3G0 1257 aa3.18□□□□□ -1.9
CHD9-204ENST00000561869 DACT2Q5SW24 774 aa3.18□□□□□ -1.9
CHD9-204ENST00000561869 TSHZ3Q63HK5 1081 aa3.18□□□□□ -1.9
CHD9-204ENST00000561869 ZNF529Q6P280 563 aa3.18□□□□□ -1.9
CHD9-204ENST00000561869 Q6YL49 198 aa3.18□□□□□ -1.9
CHD9-204ENST00000561869 AMOTL1Q8IY63 956 aa3.18□□□□□ -1.9
CHD9-204ENST00000561869 TMEM132CQ8N3T6 1108 aa3.18□□□□□ -1.9
CHD9-204ENST00000561869 DCBLD1Q8N8Z6 715 aa3.18□□□□□ -1.9
CHD9-204ENST00000561869 FUBP1Q96AE4 644 aaKnown RBP3.18□□□□□ -1.9
CHD9-204ENST00000561869 FUBP3Q96I24 572 aaKnown RBP eCLIP3.18□□□□□ -1.9
CHD9-204ENST00000561869 PHACTR3Q96KR7 559 aa3.18□□□□□ -1.9
CHD9-204ENST00000561869 DMRTA2Q96SC8 542 aa3.18□□□□□ -1.9
CHD9-204ENST00000561869 TMEM140Q9NV12 185 aa3.18□□□□□ -1.9
CHD9-204ENST00000561869 MKS1Q9NXB0 559 aa3.18□□□□□ -1.9
CHD9-204ENST00000561869 INTUQ9ULD6 942 aa3.18□□□□□ -1.9
CHD9-204ENST00000561869 LIMCH1Q9UPQ0 1083 aa3.18□□□□□ -1.9
CHD9-204ENST00000561869 ATP11BQ9Y2G3 1177 aa3.18□□□□□ -1.9
CHD9-204ENST00000561869 IPPQ9Y573 584 aa3.18□□□□□ -1.9
CHD9-204ENST00000561869 TNKSO95271 1327 aa3.18□□□□□ -1.9
CHD9-204ENST00000561869 MYBBP1AQ9BQG0 1328 aaKnown RBP3.18□□□□□ -1.9
CHD9-204ENST00000561869 WASHC2CQ9Y4E1 1318 aa3.18□□□□□ -1.9
CHD9-204ENST00000561869 A0A1B0GTW7 788 aa3.17□□□□□ -1.9
CHD9-204ENST00000561869 KLHL33A6NCF5 533 aa3.17□□□□□ -1.9
CHD9-204ENST00000561869 UNC119BA6NIH7 251 aa3.17□□□□□ -1.9
CHD9-204ENST00000561869 TEX33O43247 280 aa3.17□□□□□ -1.9
CHD9-204ENST00000561869 HTRA2O43464 458 aaPredicted RBP3.17□□□□□ -1.9
CHD9-204ENST00000561869 B3GALT2O43825 422 aa3.17□□□□□ -1.9
CHD9-204ENST00000561869 SPATA31D3P0C874 917 aa3.17□□□□□ -1.9
CHD9-204ENST00000561869 MYBL2P10244 700 aa3.17□□□□□ -1.9
CHD9-204ENST00000561869 EGR2P11161 476 aaPredicted RBP3.17□□□□□ -1.9
CHD9-204ENST00000561869 SLC6A4P31645 630 aa3.17□□□□□ -1.9
CHD9-204ENST00000561869 NANOS3P60323 173 aaKnown RBP3.17□□□□□ -1.9
CHD9-204ENST00000561869 TAP1Q03518 808 aa3.17□□□□□ -1.9
CHD9-204ENST00000561869 ITKQ08881 620 aa3.17□□□□□ -1.9
CHD9-204ENST00000561869 FSTL1Q12841 308 aa3.17□□□□□ -1.9
CHD9-204ENST00000561869 CLUL1Q15846 466 aa3.17□□□□□ -1.9
CHD9-204ENST00000561869 SPATA31D4Q6ZUB0 917 aa3.17□□□□□ -1.9
CHD9-204ENST00000561869 UBE3BQ7Z3V4 1068 aa3.17□□□□□ -1.9
CHD9-204ENST00000561869 MAPKAPK5Q8IW41 473 aa3.17□□□□□ -1.9
CHD9-204ENST00000561869 BEND2Q8NDZ0 799 aa3.17□□□□□ -1.9
CHD9-204ENST00000561869 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.17□□□□□ -1.9
CHD9-204ENST00000561869 ASB10Q8WXI3 467 aa3.17□□□□□ -1.9
CHD9-204ENST00000561869 LINC00476Q8WZB0 136 aa3.17□□□□□ -1.9
CHD9-204ENST00000561869 NACC2Q96BF6 587 aa3.17□□□□□ -1.9
CHD9-204ENST00000561869 C7orf25Q9BPX7 421 aa3.17□□□□□ -1.9
CHD9-204ENST00000561869 ZSWIM1Q9BR11 485 aa3.17□□□□□ -1.9
CHD9-204ENST00000561869 MANSC1Q9H8J5 431 aa3.17□□□□□ -1.9
CHD9-204ENST00000561869 ALG13Q9NP73 1137 aaKnown RBP3.17□□□□□ -1.9
CHD9-204ENST00000561869 PCDH12Q9NPG4 1184 aa3.17□□□□□ -1.9
CHD9-204ENST00000561869 SERPINB13Q9UIV8 391 aa3.17□□□□□ -1.9
CHD9-204ENST00000561869 PACSIN3Q9UKS6 424 aa3.17□□□□□ -1.9
CHD9-204ENST00000561869 RUVBL1Q9Y265 456 aaKnown RBP3.17□□□□□ -1.9
CHD9-204ENST00000561869 PCDHA13Q9Y5I0 950 aa3.17□□□□□ -1.9
CHD9-204ENST00000561869 EPN1Q9Y6I3 576 aaPredicted RBP3.17□□□□□ -1.9
CHD9-204ENST00000561869 SHROOM4Q9ULL8 1493 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 TCRBV7S2A1N4TA0A589 114 aa3.16□□□□□ -1.9
CHD9-204ENST00000561869 SHTN1A0MZ66 631 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms