RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 ZNF516Q92618 1163 aa13.71□□□□□ -0.21
CMTM4-203ENST00000561680 POP1Q99575 1024 aaKnown RBP13.71□□□□□ -0.21
CMTM4-203ENST00000561680 TRIM5Q9C035 493 aa13.71□□□□□ -0.21
CMTM4-203ENST00000561680 XPO4Q9C0E2 1151 aaKnown RBP13.71□□□□□ -0.21
CMTM4-203ENST00000561680 CXCL16Q9H2A7 254 aa13.71□□□□□ -0.21
CMTM4-203ENST00000561680 RSAD1Q9HA92 442 aa13.71□□□□□ -0.21
CMTM4-203ENST00000561680 TMEM8AQ9HCN3 771 aa13.71□□□□□ -0.21
CMTM4-203ENST00000561680 UBN1Q9NPG3 1134 aa13.71□□□□□ -0.21
CMTM4-203ENST00000561680 RNF19AQ9NV58 838 aa13.71□□□□□ -0.21
CMTM4-203ENST00000561680 KLK14Q9P0G3 267 aa13.71□□□□□ -0.21
CMTM4-203ENST00000561680 GTPBP10A4D1E9 387 aaKnown RBP13.7□□□□□ -0.22
CMTM4-203ENST00000561680 ARL5CA6NH57 179 aa13.7□□□□□ -0.22
CMTM4-203ENST00000561680 PES1O00541 588 aaKnown RBP13.7□□□□□ -0.22
CMTM4-203ENST00000561680 PTGESO14684 152 aa13.7□□□□□ -0.22
CMTM4-203ENST00000561680 P4HA2O15460 535 aa13.7□□□□□ -0.22
CMTM4-203ENST00000561680 TEX33O43247 280 aa13.7□□□□□ -0.22
CMTM4-203ENST00000561680 ACTN1P12814 892 aa13.7□□□□□ -0.22
CMTM4-203ENST00000561680 MLH1P40692 756 aa13.7□□□□□ -0.22
CMTM4-203ENST00000561680 GCLMP48507 274 aa13.7□□□□□ -0.22
CMTM4-203ENST00000561680 MXI1P50539 228 aa13.7□□□□□ -0.22
CMTM4-203ENST00000561680 ZNF75DP51815 510 aa13.7□□□□□ -0.22
CMTM4-203ENST00000561680 AP3M2P53677 418 aa13.7□□□□□ -0.22
CMTM4-203ENST00000561680 MYL7Q01449 175 aa13.7□□□□□ -0.22
CMTM4-203ENST00000561680 NR1I3Q14994 352 aa13.7□□□□□ -0.22
CMTM4-203ENST00000561680 ZACNQ401N2 412 aa13.7□□□□□ -0.22
CMTM4-203ENST00000561680 CBWD6Q4V339 395 aa13.7□□□□□ -0.22
CMTM4-203ENST00000561680 CBWD3Q5JTY5 395 aa13.7□□□□□ -0.22
CMTM4-203ENST00000561680 CLLU1OSQ5K130 101 aa13.7□□□□□ -0.22
CMTM4-203ENST00000561680 CBWD5Q5RIA9 395 aa13.7□□□□□ -0.22
CMTM4-203ENST00000561680 PSRC1Q6PGN9 363 aaPredicted RBP13.7□□□□□ -0.22
CMTM4-203ENST00000561680 C16orf59Q7L2K0 433 aa13.7□□□□□ -0.22
CMTM4-203ENST00000561680 NPAS4Q8IUM7 802 aa13.7□□□□□ -0.22
CMTM4-203ENST00000561680 RNF169Q8NCN4 708 aa13.7□□□□□ -0.22
CMTM4-203ENST00000561680 GSTCDQ8NEC7 633 aa13.7□□□□□ -0.22
CMTM4-203ENST00000561680 OR5B17Q8NGF7 314 aa13.7□□□□□ -0.22
CMTM4-203ENST00000561680 KIF12Q96FN5 646 aa13.7□□□□□ -0.22
CMTM4-203ENST00000561680 FAM84AQ96KN4 292 aa13.7□□□□□ -0.22
CMTM4-203ENST00000561680 ZFP42Q96MM3 310 aa13.7□□□□□ -0.22
CMTM4-203ENST00000561680 ZMAT2Q96NC0 199 aaKnown RBP13.7□□□□□ -0.22
CMTM4-203ENST00000561680 RPS6KC1Q96S38 1066 aa13.7□□□□□ -0.22
CMTM4-203ENST00000561680 GAD1Q99259 594 aa13.7□□□□□ -0.22
CMTM4-203ENST00000561680 MTMR12Q9C0I1 747 aa13.7□□□□□ -0.22
CMTM4-203ENST00000561680 TMEM117Q9H0C3 514 aa13.7□□□□□ -0.22
CMTM4-203ENST00000561680 MMRN2Q9H8L6 949 aa13.7□□□□□ -0.22
CMTM4-203ENST00000561680 RNF216Q9NWF9 866 aaPredicted RBP13.7□□□□□ -0.22
CMTM4-203ENST00000561680 SMIM28A0A1B0GU29 152 aa13.69□□□□□ -0.22
CMTM4-203ENST00000561680 C4BPAP04003 597 aaKnown RBP13.69□□□□□ -0.22
CMTM4-203ENST00000561680 TPM3P06753 285 aa13.69□□□□□ -0.22
CMTM4-203ENST00000561680 TMEM191BP0C7N4 346 aa13.69□□□□□ -0.22
CMTM4-203ENST00000561680 IBSPP21815 317 aaPredicted RBP13.69□□□□□ -0.22
CMTM4-203ENST00000561680 PBX1P40424 430 aa13.69□□□□□ -0.22
CMTM4-203ENST00000561680 EPHB4P54760 987 aa13.69□□□□□ -0.22
CMTM4-203ENST00000561680 WDR5P61964 334 aaKnown RBP13.69□□□□□ -0.22
CMTM4-203ENST00000561680 TFAMQ00059 246 aaKnown RBP13.69□□□□□ -0.22
CMTM4-203ENST00000561680 UBXN1Q04323 297 aa13.69□□□□□ -0.22
CMTM4-203ENST00000561680 ZBTB6Q15916 424 aa13.69□□□□□ -0.22
CMTM4-203ENST00000561680 DUOXA2Q1HG44 320 aa13.69□□□□□ -0.22
CMTM4-203ENST00000561680 GLRA4Q5JXX5 417 aa13.69□□□□□ -0.22
CMTM4-203ENST00000561680 TMEM240Q5SV17 173 aa13.69□□□□□ -0.22
CMTM4-203ENST00000561680 FKBP15Q5T1M5 1219 aa13.69□□□□□ -0.22
CMTM4-203ENST00000561680 TDRD10Q5VZ19 366 aaKnown RBP13.69□□□□□ -0.22
CMTM4-203ENST00000561680 KRT39Q6A163 491 aa13.69□□□□□ -0.22
CMTM4-203ENST00000561680 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.69□□□□□ -0.222e-7■■■□□ 15.2
CMTM4-203ENST00000561680 SV2AQ7L0J3 742 aa13.69□□□□□ -0.22
CMTM4-203ENST00000561680 MRFAP1L1Q96HT8 127 aa13.69□□□□□ -0.22
CMTM4-203ENST00000561680 ANKRD36BP1Q96IX9 119 aa13.69□□□□□ -0.22
CMTM4-203ENST00000561680 PPP1R10Q96QC0 940 aaKnown RBP13.69□□□□□ -0.22
CMTM4-203ENST00000561680 ERGIC2Q96RQ1 377 aa13.69□□□□□ -0.22
CMTM4-203ENST00000561680 COQ4Q9Y3A0 265 aa13.69□□□□□ -0.22
CMTM4-203ENST00000561680 PCDHB7Q9Y5E2 793 aa13.69□□□□□ -0.22
CMTM4-203ENST00000561680 NR2E3Q9Y5X4 410 aa13.69□□□□□ -0.22
CMTM4-203ENST00000561680 PLXNA4Q9HCM2 1894 aa13.68□□□□□ -0.22
CMTM4-203ENST00000561680 HOXA2O43364 376 aa13.68□□□□□ -0.22
CMTM4-203ENST00000561680 OFD1O75665 1012 aa13.68□□□□□ -0.22
CMTM4-203ENST00000561680 TNNC2P02585 160 aa13.68□□□□□ -0.22
CMTM4-203ENST00000561680 FGFR1P11362 822 aa13.68□□□□□ -0.22
CMTM4-203ENST00000561680 SCNN1GP51170 649 aa13.68□□□□□ -0.22
CMTM4-203ENST00000561680 GRIK3Q13003 919 aa13.68□□□□□ -0.22
CMTM4-203ENST00000561680 EPC2Q52LR7 807 aa13.68□□□□□ -0.22
CMTM4-203ENST00000561680 GLB1LQ6UWU2 654 aa13.68□□□□□ -0.22
CMTM4-203ENST00000561680 ZNF365Q70YC5 407 aa13.68□□□□□ -0.22
CMTM4-203ENST00000561680 HELQQ8TDG4 1101 aa13.68□□□□□ -0.22
CMTM4-203ENST00000561680 CACTINQ8WUQ7 758 aaKnown RBP13.68□□□□□ -0.22
CMTM4-203ENST00000561680 RSPH1Q8WYR4 309 aa13.68□□□□□ -0.22
CMTM4-203ENST00000561680 LBHD1Q9BQE6 289 aaPredicted RBP13.68□□□□□ -0.22
CMTM4-203ENST00000561680 GCNT4Q9P109 453 aa13.68□□□□□ -0.22
CMTM4-203ENST00000561680 LRFN2Q9ULH4 789 aa13.68□□□□□ -0.22
CMTM4-203ENST00000561680 UBQLN1Q9UMX0 589 aaKnown RBP13.68□□□□□ -0.22
CMTM4-203ENST00000561680 PLAGL2Q9UPG8 496 aa13.68□□□□□ -0.22
CMTM4-203ENST00000561680 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.68□□□□□ -0.22
CMTM4-203ENST00000561680 TNRC18O15417 2968 aaPredicted RBP13.68□□□□□ -0.22
CMTM4-203ENST00000561680 PTPRDP23468 1912 aa13.67□□□□□ -0.22
CMTM4-203ENST00000561680 A0A1W2PQC6 194 aa13.67□□□□□ -0.22
CMTM4-203ENST00000561680 TULP1O00294 542 aaPredicted RBP13.67□□□□□ -0.22
CMTM4-203ENST00000561680 XPOTO43592 962 aaKnown RBP13.67□□□□□ -0.22
CMTM4-203ENST00000561680 VNN1O95497 513 aa13.67□□□□□ -0.22
CMTM4-203ENST00000561680 ADCY5O95622 1261 aa13.67□□□□□ -0.22
CMTM4-203ENST00000561680 FGBP02675 491 aa13.67□□□□□ -0.22
CMTM4-203ENST00000561680 AMHP03971 560 aa13.67□□□□□ -0.22
CMTM4-203ENST00000561680 THP07101 528 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms