RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 TLCD1Q96CP7 247 aa11.73□□□□□ -0.53
NEIL1-202ENST00000561643 SLC38A10Q9HBR0 1119 aa11.73□□□□□ -0.53
NEIL1-202ENST00000561643 ANKEF1Q9NU02 776 aa11.73□□□□□ -0.53
NEIL1-202ENST00000561643 L3MBTL1Q9Y468 752 aa11.73□□□□□ -0.53
NEIL1-202ENST00000561643 ATP6V1G2O95670 118 aa11.73□□□□□ -0.53
NEIL1-202ENST00000561643 CYP1A2P05177 515 aa11.73□□□□□ -0.53
NEIL1-202ENST00000561643 SFNP31947 248 aa11.73□□□□□ -0.53
NEIL1-202ENST00000561643 COILP38432 576 aaPredicted RBP11.73□□□□□ -0.53
NEIL1-202ENST00000561643 KCNJ1P48048 391 aa11.73□□□□□ -0.53
NEIL1-202ENST00000561643 KRT76Q01546 638 aa11.73□□□□□ -0.53
NEIL1-202ENST00000561643 BYSLQ13895 437 aaKnown RBP11.73□□□□□ -0.53
NEIL1-202ENST00000561643 PPP1R7Q15435 360 aa11.73□□□□□ -0.53
NEIL1-202ENST00000561643 CPLX4Q7Z7G2 160 aa11.73□□□□□ -0.53
NEIL1-202ENST00000561643 USP37Q86T82 979 aa11.73□□□□□ -0.53
NEIL1-202ENST00000561643 C3orf20Q8ND61 904 aa11.73□□□□□ -0.53
NEIL1-202ENST00000561643 SPDYE1Q8NFV5 336 aaPredicted RBP11.73□□□□□ -0.53
NEIL1-202ENST00000561643 HELQQ8TDG4 1101 aa11.73□□□□□ -0.53
NEIL1-202ENST00000561643 DHX38Q92620 1227 aaKnown RBP11.73□□□□□ -0.53
NEIL1-202ENST00000561643 CD101Q93033 1021 aa11.73□□□□□ -0.53
NEIL1-202ENST00000561643 SEMA4AQ9H3S1 761 aa11.73□□□□□ -0.53
NEIL1-202ENST00000561643 RAB20Q9NX57 234 aa11.73□□□□□ -0.53
NEIL1-202ENST00000561643 UVRAGQ9P2Y5 699 aa11.73□□□□□ -0.53
NEIL1-202ENST00000561643 RGS16O15492 202 aaPredicted RBP11.72□□□□□ -0.53
NEIL1-202ENST00000561643 PAEPP09466 180 aa11.72□□□□□ -0.53
NEIL1-202ENST00000561643 FGFR4P22455 802 aa11.72□□□□□ -0.53
NEIL1-202ENST00000561643 SOX10P56693 466 aa11.72□□□□□ -0.53
NEIL1-202ENST00000561643 RNF207Q6ZRF8 634 aa11.72□□□□□ -0.53
NEIL1-202ENST00000561643 CCDC25Q86WR0 208 aa11.72□□□□□ -0.53
NEIL1-202ENST00000561643 SEC16BQ96JE7 1060 aa11.72□□□□□ -0.53
NEIL1-202ENST00000561643 PDCD2LQ9BRP1 358 aa11.72□□□□□ -0.53
NEIL1-202ENST00000561643 AZI2Q9H6S1 392 aa11.72□□□□□ -0.53
NEIL1-202ENST00000561643 GGA2Q9UJY4 613 aa11.72□□□□□ -0.53
NEIL1-202ENST00000561643 PCDHA3Q9Y5H8 950 aa11.72□□□□□ -0.53
NEIL1-202ENST00000561643 PASKQ96RG2 1323 aa11.72□□□□□ -0.53
NEIL1-202ENST00000561643 TTC36A6NLP5 189 aa11.72□□□□□ -0.53
NEIL1-202ENST00000561643 WNT10BO00744 389 aa11.72□□□□□ -0.53
NEIL1-202ENST00000561643 RARAP10276 462 aa11.72□□□□□ -0.53
NEIL1-202ENST00000561643 GPC3P51654 580 aa11.72□□□□□ -0.53
NEIL1-202ENST00000561643 ELF3P78545 371 aaPredicted RBP11.72□□□□□ -0.53
NEIL1-202ENST00000561643 USP4Q13107 963 aa11.72□□□□□ -0.53
NEIL1-202ENST00000561643 ANO5Q75V66 913 aa11.72□□□□□ -0.53
NEIL1-202ENST00000561643 MAB21L3Q8N8X9 362 aa11.72□□□□□ -0.53
NEIL1-202ENST00000561643 TCP11Q8WWU5 503 aa11.72□□□□□ -0.53
NEIL1-202ENST00000561643 HVCN1Q96D96 273 aa11.72□□□□□ -0.53
NEIL1-202ENST00000561643 CEP170P1Q96L14 293 aa11.72□□□□□ -0.53
NEIL1-202ENST00000561643 CAMKK2Q96RR4 588 aa11.72□□□□□ -0.53
NEIL1-202ENST00000561643 YIPF3Q9GZM5 350 aa11.72□□□□□ -0.53
NEIL1-202ENST00000561643 USP20Q9Y2K6 914 aa11.72□□□□□ -0.53
NEIL1-202ENST00000561643 PHF20L1A8MW92 1017 aa11.71□□□□□ -0.53
NEIL1-202ENST00000561643 HNRNPDLO14979 420 aaKnown RBP11.71□□□□□ -0.53
NEIL1-202ENST00000561643 CTNND1O60716 968 aaKnown RBP11.71□□□□□ -0.53
NEIL1-202ENST00000561643 PYGLP06737 847 aa11.71□□□□□ -0.53
NEIL1-202ENST00000561643 GHRHRQ02643 423 aa11.71□□□□□ -0.53
NEIL1-202ENST00000561643 CDCA2Q69YH5 1023 aaPredicted RBP11.71□□□□□ -0.53
NEIL1-202ENST00000561643 BZW1Q7L1Q6 419 aaKnown RBP11.71□□□□□ -0.53
NEIL1-202ENST00000561643 NLRX1Q86UT6 975 aa11.71□□□□□ -0.53
NEIL1-202ENST00000561643 NIM1KQ8IY84 436 aa11.71□□□□□ -0.53
NEIL1-202ENST00000561643 CACNA2D3Q8IZS8 1091 aa11.71□□□□□ -0.53
NEIL1-202ENST00000561643 BICD1Q96G01 975 aa11.71□□□□□ -0.53
NEIL1-202ENST00000561643 RUNDC3BQ96NL0 473 aa11.71□□□□□ -0.53
NEIL1-202ENST00000561643 PLVAPQ9BX97 442 aa11.71□□□□□ -0.53
NEIL1-202ENST00000561643 ZCWPW1Q9H0M4 648 aa11.71□□□□□ -0.53
NEIL1-202ENST00000561643 PXMP2Q9NR77 195 aa11.71□□□□□ -0.53
NEIL1-202ENST00000561643 MAP3K20Q9NYL2 800 aaKnown RBP11.71□□□□□ -0.53
NEIL1-202ENST00000561643 COQ4Q9Y3A0 265 aa11.71□□□□□ -0.53
NEIL1-202ENST00000561643 CLDN3O15551 220 aa11.71□□□□□ -0.53
NEIL1-202ENST00000561643 MGRN1O60291 552 aa11.71□□□□□ -0.53
NEIL1-202ENST00000561643 ZBED4O75132 1171 aa11.71□□□□□ -0.53
NEIL1-202ENST00000561643 UPP2O95045 317 aa11.71□□□□□ -0.53
NEIL1-202ENST00000561643 CLTAP09496 248 aa11.71□□□□□ -0.53
NEIL1-202ENST00000561643 SLCO1A2P46721 670 aa11.71□□□□□ -0.53
NEIL1-202ENST00000561643 CALCOCO2Q13137 446 aa11.71□□□□□ -0.53
NEIL1-202ENST00000561643 XRCC4Q13426 336 aa11.71□□□□□ -0.53
NEIL1-202ENST00000561643 MKRN4PQ13434 485 aaPredicted RBP11.71□□□□□ -0.53
NEIL1-202ENST00000561643 SLMAPQ14BN4 828 aa11.71□□□□□ -0.53
NEIL1-202ENST00000561643 THEMIS2Q5TEJ8 643 aa11.71□□□□□ -0.53
NEIL1-202ENST00000561643 GKAP1Q5VSY0 366 aaPredicted RBP11.71□□□□□ -0.53
NEIL1-202ENST00000561643 CAPRIN2Q6IMN6 1127 aaKnown RBP11.71□□□□□ -0.53
NEIL1-202ENST00000561643 ACAD10Q6JQN1 1059 aa11.71□□□□□ -0.53
NEIL1-202ENST00000561643 SV2AQ7L0J3 742 aa11.71□□□□□ -0.53
NEIL1-202ENST00000561643 OTUD6AQ7L8S5 288 aa11.71□□□□□ -0.53
NEIL1-202ENST00000561643 PNMA8AQ86V59 439 aaPredicted RBP11.71□□□□□ -0.53
NEIL1-202ENST00000561643 AGBL3Q8NEM8 1001 aa11.71□□□□□ -0.53
NEIL1-202ENST00000561643 BSNDQ8WZ55 320 aa11.71□□□□□ -0.53
NEIL1-202ENST00000561643 PGM2Q96G03 612 aa11.71□□□□□ -0.53
NEIL1-202ENST00000561643 XPO6Q96QU8 1125 aaKnown RBP11.71□□□□□ -0.53
NEIL1-202ENST00000561643 PI4K2AQ9BTU6 479 aa11.71□□□□□ -0.53
NEIL1-202ENST00000561643 KIAA1683Q9H0B3 1180 aa11.71□□□□□ -0.53
NEIL1-202ENST00000561643 ANAPC7Q9UJX3 599 aa11.71□□□□□ -0.53
NEIL1-202ENST00000561643 CALCAP01258 141 aa11.71□□□□□ -0.54
NEIL1-202ENST00000561643 CHN1P15882 459 aa11.71□□□□□ -0.54
NEIL1-202ENST00000561643 SP4Q02446 784 aa11.71□□□□□ -0.54
NEIL1-202ENST00000561643 CYP24A1Q07973 514 aa11.71□□□□□ -0.54
NEIL1-202ENST00000561643 CYP1B1Q16678 543 aa11.71□□□□□ -0.54
NEIL1-202ENST00000561643 ARMC9Q7Z3E5 817 aa11.71□□□□□ -0.54
NEIL1-202ENST00000561643 MTMR14Q8NCE2 650 aa11.71□□□□□ -0.54
NEIL1-202ENST00000561643 TMC2Q8TDI7 906 aa11.71□□□□□ -0.54
NEIL1-202ENST00000561643 MOV10L1Q9BXT6 1211 aaKnown RBP11.71□□□□□ -0.54
NEIL1-202ENST00000561643 GABBR1Q9UBS5 961 aa11.71□□□□□ -0.54
NEIL1-202ENST00000561643 ZNRF3Q9ULT6 936 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms