RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 ECHDC1Q9NTX5 307 aa6.05□□□□□ -1.44
HERC1-213ENST00000561359 STK39Q9UEW8 545 aa6.05□□□□□ -1.44
HERC1-213ENST00000561359 CDH7Q9ULB5 785 aa6.05□□□□□ -1.44
HERC1-213ENST00000561359 INPP5FQ9Y2H2 1132 aa6.05□□□□□ -1.44
HERC1-213ENST00000561359 ACACAQ13085 2346 aa6.05□□□□□ -1.44
HERC1-213ENST00000561359 MYH7P12883 1935 aa6.05□□□□□ -1.44
HERC1-213ENST00000561359 PATJQ8NI35 1801 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 C2orf16Q68DN1 1984 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 A0A0U1RQF3 1178 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 C4orf47A7E2U8 309 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 GNB5O14775 395 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 ZBTB5O15062 677 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 TEX28O15482 410 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 HYAL3O43820 417 aaPredicted RBP6.04□□□□□ -1.44
HERC1-213ENST00000561359 GAS2O43903 313 aaKnown RBP6.04□□□□□ -1.44
HERC1-213ENST00000561359 PPP1R11O60927 126 aaPredicted RBP6.04□□□□□ -1.44
HERC1-213ENST00000561359 VTNP04004 478 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 RLBP1P12271 317 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 KCNA2P16389 499 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 SLC11A1P49279 550 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 TYRO3Q06418 890 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 TRAF1Q13077 416 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 RTN1Q16799 776 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 LONRF3Q496Y0 759 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 TSHZ3Q63HK5 1081 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 BTLAQ7Z6A9 289 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 RAB44Q7Z6P3 723 aaPredicted RBP6.04□□□□□ -1.44
HERC1-213ENST00000561359 LONP2Q86WA8 852 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 PROSER1Q86XN7 944 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 PALB2Q86YC2 1186 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 HOMER1Q86YM7 354 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 GPATCH3Q96I76 525 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 CDHR1Q96JP9 859 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 RPS6KC1Q96S38 1066 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 PCYT2Q99447 389 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 IER2Q9BTL4 223 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 EDEM2Q9BV94 578 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 PLEKHA4Q9H4M7 779 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 NRDE2Q9H7Z3 1164 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 LMAN1LQ9HAT1 526 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 ZDHHC7Q9NXF8 308 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 NOVA2Q9UNW9 492 aaKnown RBP6.04□□□□□ -1.44
HERC1-213ENST00000561359 MSRB2Q9Y3D2 182 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 NEUROG3Q9Y4Z2 214 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 TENM4Q6N022 2769 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 CELSR3Q9NYQ7 3312 aa6.04□□□□□ -1.44
HERC1-213ENST00000561359 LOXHD1Q8IVV2 1947 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 CACNA1EQ15878 2313 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 ELOA3CA0A087WX78 387 aaPredicted RBP6.03□□□□□ -1.44
HERC1-213ENST00000561359 ELOA3DA6NLF2 546 aaPredicted RBP6.03□□□□□ -1.44
HERC1-213ENST00000561359 MAN2B1O00754 1011 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 FOXP2O15409 715 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 SMARCA5O60264 1052 aaPredicted RBP6.03□□□□□ -1.44
HERC1-213ENST00000561359 EPN2O95208 641 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 IGHA1P01876 353 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 PRB1P04280 392 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 CEACAM1P13688 526 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 MPLP40238 635 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 STAT5BP51692 787 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 HAND2P61296 217 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 NTHL1P78549 312 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 TROAPQ12815 778 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 ELOA3BQ3SY89 546 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 NOMO2Q5JPE7 1267 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 ZMYM1Q5SVZ6 1142 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 VPS53Q5VIR6 699 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 PCNX4Q63HM2 1172 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 LARP1BQ659C4 914 aaKnown RBP6.03□□□□□ -1.44
HERC1-213ENST00000561359 TCEAL6Q6IPX3 200 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 GLB1LQ6UWU2 654 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 MFSD6Q6ZSS7 791 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 GRASPQ7Z6J2 395 aaPredicted RBP6.03□□□□□ -1.44
HERC1-213ENST00000561359 DGKHQ86XP1 1220 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 METTL13Q8N6R0 699 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 ELOA3Q8NG57 546 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 HNRNPLLQ8WVV9 542 aaKnown RBP6.03□□□□□ -1.44
HERC1-213ENST00000561359 FGF13Q92913 245 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 BHMTQ93088 406 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 TCEAL3Q969E4 200 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 GPRASP2Q96D09 838 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 CCDC97Q96F63 343 aaPredicted RBP6.03□□□□□ -1.44
HERC1-213ENST00000561359 LRIG1Q96JA1 1093 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 LOXL4Q96JB6 756 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 LRRCC1Q9C099 1032 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 JPH1Q9HDC5 661 aaPredicted RBP6.03□□□□□ -1.44
HERC1-213ENST00000561359 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.03□□□□□ -1.443e-11■■■■■ 99.4
HERC1-213ENST00000561359 TBC1D13Q9NVG8 400 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 CACNA2D2Q9NY47 1150 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 DACT1Q9NYF0 836 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 DNAJB4Q9UDY4 337 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 KLK13Q9UKR3 277 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 SSX2IPQ9Y2D8 614 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 ADAMTS20P59510 1910 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 APC2O95996 2303 aa6.03□□□□□ -1.44
HERC1-213ENST00000561359 FRMPD4Q14CM0 1322 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 PIEZO2Q9H5I5 2752 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 KLRF2D3W0D1 207 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 HBP1O60381 514 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 SIN3BO75182 1162 aa6.02□□□□□ -1.45
HERC1-213ENST00000561359 GPR32O75388 356 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms