RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 ACTN4O43707 911 aaKnown RBP11.02□□□□□ -0.65
HERC1-212ENST00000561348 CLSTN1O94985 981 aa11.02□□□□□ -0.65
HERC1-212ENST00000561348 SOD2P04179 222 aa11.02□□□□□ -0.65
HERC1-212ENST00000561348 SPATA31D3P0C874 917 aa11.02□□□□□ -0.65
HERC1-212ENST00000561348 CTSAP10619 480 aa11.02□□□□□ -0.65
HERC1-212ENST00000561348 RPL17P18621 184 aaKnown RBP11.02□□□□□ -0.65
HERC1-212ENST00000561348 SCP2P22307 547 aa11.02□□□□□ -0.65
HERC1-212ENST00000561348 GUCY2FP51841 1108 aa11.02□□□□□ -0.65
HERC1-212ENST00000561348 SOX4Q06945 474 aaPredicted RBP11.02□□□□□ -0.65
HERC1-212ENST00000561348 ADAM15Q13444 863 aa11.02□□□□□ -0.65
HERC1-212ENST00000561348 DUSP6Q16828 381 aa11.02□□□□□ -0.65
HERC1-212ENST00000561348 SLC10A6Q3KNW5 377 aa11.02□□□□□ -0.65
HERC1-212ENST00000561348 ARMCX5Q6P1M9 558 aa11.02□□□□□ -0.65
HERC1-212ENST00000561348 SLC39A4Q6P5W5 647 aa11.02□□□□□ -0.65
HERC1-212ENST00000561348 SPATA31D4Q6ZUB0 917 aa11.02□□□□□ -0.65
HERC1-212ENST00000561348 UNC13DQ70J99 1090 aa11.02□□□□□ -0.65
HERC1-212ENST00000561348 PALB2Q86YC2 1186 aa11.02□□□□□ -0.65
HERC1-212ENST00000561348 CCDC47Q96A33 483 aaKnown RBP11.02□□□□□ -0.65
HERC1-212ENST00000561348 ZMAT2Q96NC0 199 aaKnown RBP11.02□□□□□ -0.65
HERC1-212ENST00000561348 EMILIN2Q9BXX0 1053 aa11.02□□□□□ -0.65
HERC1-212ENST00000561348 SLC38A7Q9NVC3 462 aa11.02□□□□□ -0.65
HERC1-212ENST00000561348 TUBGCP4Q9UGJ1 667 aa11.02□□□□□ -0.65
HERC1-212ENST00000561348 A0A0B4J269 797 aa11.01□□□□□ -0.65
HERC1-212ENST00000561348 PODXLO00592 558 aa11.01□□□□□ -0.65
HERC1-212ENST00000561348 CLIC2O15247 247 aa11.01□□□□□ -0.65
HERC1-212ENST00000561348 INPPL1O15357 1258 aa11.01□□□□□ -0.65
HERC1-212ENST00000561348 CLASP2O75122 1294 aaKnown RBP11.01□□□□□ -0.65
HERC1-212ENST00000561348 TBX10O75333 385 aa11.01□□□□□ -0.65
HERC1-212ENST00000561348 ZNF202O95125 648 aa11.01□□□□□ -0.65
HERC1-212ENST00000561348 IL9P15248 144 aa11.01□□□□□ -0.65
HERC1-212ENST00000561348 SP100P23497 879 aaPredicted RBP11.01□□□□□ -0.65
HERC1-212ENST00000561348 IGFBP6P24592 240 aaPredicted RBP11.01□□□□□ -0.65
HERC1-212ENST00000561348 SSTR3P32745 418 aaPredicted RBP11.01□□□□□ -0.65
HERC1-212ENST00000561348 MCM4P33991 863 aa11.01□□□□□ -0.65
HERC1-212ENST00000561348 BRCC3P46736 316 aa11.01□□□□□ -0.65
HERC1-212ENST00000561348 CYP2J2P51589 502 aa11.01□□□□□ -0.65
HERC1-212ENST00000561348 ARPP19P56211 112 aa11.01□□□□□ -0.65
HERC1-212ENST00000561348 ALCAMQ13740 583 aa11.01□□□□□ -0.65
HERC1-212ENST00000561348 POSTNQ15063 836 aa11.01□□□□□ -0.65
HERC1-212ENST00000561348 PTPN14Q15678 1187 aa11.01□□□□□ -0.65
HERC1-212ENST00000561348 ENOX2Q16206 610 aaKnown RBP11.01□□□□□ -0.65
HERC1-212ENST00000561348 KYAT1Q16773 422 aa11.01□□□□□ -0.65
HERC1-212ENST00000561348 USP41Q3LFD5 358 aa11.01□□□□□ -0.65
HERC1-212ENST00000561348 DCLRE1AQ6PJP8 1040 aa11.01□□□□□ -0.65
HERC1-212ENST00000561348 PRSS55Q6UWB4 352 aaPredicted RBP11.01□□□□□ -0.65
HERC1-212ENST00000561348 EFHBQ8N7U6 833 aa11.01□□□□□ -0.65
HERC1-212ENST00000561348 C12orf76Q8N812 135 aaPredicted RBP11.01□□□□□ -0.65
HERC1-212ENST00000561348 RDH13Q8NBN7 331 aa11.01□□□□□ -0.65
HERC1-212ENST00000561348 ADAMTS19Q8TE59 1207 aa11.01□□□□□ -0.65
HERC1-212ENST00000561348 HVCN1Q96D96 273 aa11.01□□□□□ -0.65
HERC1-212ENST00000561348 CCDC34Q96HJ3 373 aa11.01□□□□□ -0.65
HERC1-212ENST00000561348 PPP1R10Q96QC0 940 aaKnown RBP11.01□□□□□ -0.65
HERC1-212ENST00000561348 HERC2P3Q9BVR0 1158 aa11.01□□□□□ -0.65
HERC1-212ENST00000561348 ST6GALNAC4Q9H4F1 302 aa11.01□□□□□ -0.65
HERC1-212ENST00000561348 TMEM206Q9H813 350 aa11.01□□□□□ -0.65
HERC1-212ENST00000561348 OLFML3Q9NRN5 406 aa11.01□□□□□ -0.65
HERC1-212ENST00000561348 USP25Q9UHP3 1055 aa11.01□□□□□ -0.65
HERC1-212ENST00000561348 CD207Q9UJ71 328 aa11.01□□□□□ -0.65
HERC1-212ENST00000561348 SF3B1O75533 1304 aaKnown RBP eCLIP11.01□□□□□ -0.65
HERC1-212ENST00000561348 BRWD1Q9NSI6 2320 aa11□□□□□ -0.65
HERC1-212ENST00000561348 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11□□□□□ -0.65
HERC1-212ENST00000561348 A0A1W2PQ27 194 aa11□□□□□ -0.65
HERC1-212ENST00000561348 A0A1W2PQ64 194 aa11□□□□□ -0.65
HERC1-212ENST00000561348 A0A1W2PQD8 194 aa11□□□□□ -0.65
HERC1-212ENST00000561348 FRMD3A2A2Y4 597 aa11□□□□□ -0.65
HERC1-212ENST00000561348 TRAPPC3O43617 180 aa11□□□□□ -0.65
HERC1-212ENST00000561348 PIGRP01833 764 aa11□□□□□ -0.65
HERC1-212ENST00000561348 RPN1P04843 607 aaKnown RBP11□□□□□ -0.65
HERC1-212ENST00000561348 CNPP09543 421 aaKnown RBP11□□□□□ -0.65
HERC1-212ENST00000561348 WEE2P0C1S8 567 aa11□□□□□ -0.65
HERC1-212ENST00000561348 EPCAMP16422 314 aa11□□□□□ -0.65
HERC1-212ENST00000561348 LTBRP36941 435 aa11□□□□□ -0.65
HERC1-212ENST00000561348 TFAMQ00059 246 aaKnown RBP11□□□□□ -0.65
HERC1-212ENST00000561348 TMEM132DQ14C87 1099 aa11□□□□□ -0.65
HERC1-212ENST00000561348 KMT5BQ4FZB7 885 aa11□□□□□ -0.65
HERC1-212ENST00000561348 RARS2Q5T160 578 aaKnown RBP11□□□□□ -0.65
HERC1-212ENST00000561348 JADE1Q6IE81 842 aa11□□□□□ -0.65
HERC1-212ENST00000561348 KANK3Q6NY19 840 aa11□□□□□ -0.65
HERC1-212ENST00000561348 KRBA2Q6ZNG9 492 aa11□□□□□ -0.65
HERC1-212ENST00000561348 PLCD3Q8N3E9 789 aa11□□□□□ -0.65
HERC1-212ENST00000561348 ZSWIM2Q8NEG5 633 aa11□□□□□ -0.65
HERC1-212ENST00000561348 VN1R2Q8NFZ6 395 aa11□□□□□ -0.65
HERC1-212ENST00000561348 GADD45GIP1Q8TAE8 222 aaPredicted RBP11□□□□□ -0.65
HERC1-212ENST00000561348 UROC1Q96N76 676 aa11□□□□□ -0.65
HERC1-212ENST00000561348 KLHL5Q96PQ7 755 aa11□□□□□ -0.65
HERC1-212ENST00000561348 UHRF1Q96T88 793 aaPredicted RBP11□□□□□ -0.65
HERC1-212ENST00000561348 CDCA3Q99618 268 aaPredicted RBP11□□□□□ -0.65
HERC1-212ENST00000561348 CBWD1Q9BRT8 395 aa11□□□□□ -0.65
HERC1-212ENST00000561348 TTPALQ9BTX7 342 aa11□□□□□ -0.65
HERC1-212ENST00000561348 COL25A1Q9BXS0 654 aaPredicted RBP11□□□□□ -0.65
HERC1-212ENST00000561348 CHMP5Q9NZZ3 219 aa11□□□□□ -0.65
HERC1-212ENST00000561348 CNTN3Q9P232 1028 aa11□□□□□ -0.65
HERC1-212ENST00000561348 MAPK8IP1Q9UQF2 711 aa11□□□□□ -0.65
HERC1-212ENST00000561348 HPSEQ9Y251 543 aa11□□□□□ -0.65
HERC1-212ENST00000561348 SSX2IPQ9Y2D8 614 aa11□□□□□ -0.65
HERC1-212ENST00000561348 HCFC2Q9Y5Z7 792 aa11□□□□□ -0.65
HERC1-212ENST00000561348 REV3LO60673 3130 aa11□□□□□ -0.65
HERC1-212ENST00000561348 PVALEFA0A1B0GWK0 134 aa10.99□□□□□ -0.65
HERC1-212ENST00000561348 TTC26A0AVF1 554 aa10.99□□□□□ -0.65
HERC1-212ENST00000561348 TEX28O15482 410 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms