RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 STK24Q9Y6E0 443 aa29.68■■■□□ 2.34
SNRPA1-215ENST00000561187 SMIM28A0A1B0GU29 152 aa29.67■■■□□ 2.34
SNRPA1-215ENST00000561187 PAPLNO95428 1278 aa29.67■■■□□ 2.34
SNRPA1-215ENST00000561187 C1RP00736 705 aa29.67■■■□□ 2.34
SNRPA1-215ENST00000561187 FGFR3P22607 806 aa29.67■■■□□ 2.34
SNRPA1-215ENST00000561187 GRM5P41594 1212 aa29.67■■■□□ 2.34
SNRPA1-215ENST00000561187 UPP1Q16831 310 aa29.67■■■□□ 2.34
SNRPA1-215ENST00000561187 CD300LGQ6UXG3 332 aa29.67■■■□□ 2.34
SNRPA1-215ENST00000561187 DDX27Q96GQ7 796 aaKnown RBP29.67■■■□□ 2.34
SNRPA1-215ENST00000561187 ANKFY1Q9P2R3 1169 aa29.67■■■□□ 2.34
SNRPA1-215ENST00000561187 LAD1O00515 517 aa29.66■■■□□ 2.34
SNRPA1-215ENST00000561187 CD2BP2O95400 341 aaKnown RBP29.66■■■□□ 2.34
SNRPA1-215ENST00000561187 SRFP11831 508 aa29.66■■■□□ 2.34
SNRPA1-215ENST00000561187 CACNB1Q02641 598 aaPredicted RBP29.66■■■□□ 2.34
SNRPA1-215ENST00000561187 RABEP1Q15276 862 aa29.66■■■□□ 2.34
SNRPA1-215ENST00000561187 SEZ6Q53EL9 994 aa29.66■■■□□ 2.34
SNRPA1-215ENST00000561187 AXDND1Q5T1B0 1012 aaPredicted RBP29.66■■■□□ 2.34
SNRPA1-215ENST00000561187 DCLRE1AQ6PJP8 1040 aa29.66■■■□□ 2.34
SNRPA1-215ENST00000561187 C1orf186Q6ZWK4 172 aa29.66■■■□□ 2.34
SNRPA1-215ENST00000561187 FRMD5Q7Z6J6 570 aa29.66■■■□□ 2.34
SNRPA1-215ENST00000561187 ZBTB45Q96K62 511 aaPredicted RBP29.66■■■□□ 2.34
SNRPA1-215ENST00000561187 ZMAT2Q96NC0 199 aaKnown RBP29.66■■■□□ 2.34
SNRPA1-215ENST00000561187 RPP25Q9BUL9 199 aaKnown RBP29.66■■■□□ 2.34
SNRPA1-215ENST00000561187 TBC1D17Q9HA65 648 aa29.66■■■□□ 2.34
SNRPA1-215ENST00000561187 TOPORSQ9NS56 1045 aaPredicted RBP29.66■■■□□ 2.34
SNRPA1-215ENST00000561187 MTRRQ9UBK8 725 aa29.66■■■□□ 2.34
SNRPA1-215ENST00000561187 VWA3AA6NCI4 1184 aa29.65■■■□□ 2.34
SNRPA1-215ENST00000561187 TMEM189-UBE2V1I3L0A0 370 aa29.65■■■□□ 2.34
SNRPA1-215ENST00000561187 PRPHP41219 470 aa29.65■■■□□ 2.34
SNRPA1-215ENST00000561187 PDXDC1Q6P996 788 aa29.65■■■□□ 2.34
SNRPA1-215ENST00000561187 ASCL5Q7RTU5 278 aa29.65■■■□□ 2.34
SNRPA1-215ENST00000561187 CCDC105Q8IYK2 499 aa29.65■■■□□ 2.34
SNRPA1-215ENST00000561187 ITFG1Q8TB96 612 aa29.65■■■□□ 2.34
SNRPA1-215ENST00000561187 ING5Q8WYH8 240 aa29.65■■■□□ 2.34
SNRPA1-215ENST00000561187 FGF14Q92915 247 aa29.65■■■□□ 2.34
SNRPA1-215ENST00000561187 SNX27Q96L92 541 aa29.65■■■□□ 2.34
SNRPA1-215ENST00000561187 TMEM134Q9H6X4 195 aa29.65■■■□□ 2.34
SNRPA1-215ENST00000561187 PTPRHQ9HD43 1115 aa29.65■■■□□ 2.34
SNRPA1-215ENST00000561187 PODXLO00592 558 aa29.64■■■□□ 2.34
SNRPA1-215ENST00000561187 ST18O60284 1047 aa29.64■■■□□ 2.34
SNRPA1-215ENST00000561187 XYLBO75191 536 aa29.64■■■□□ 2.34
SNRPA1-215ENST00000561187 HNRNPA1P09651 372 aaKnown RBP eCLIP29.64■■■□□ 2.34
SNRPA1-215ENST00000561187 GJB2P29033 226 aa29.64■■■□□ 2.34
SNRPA1-215ENST00000561187 RAB33AQ14088 237 aa29.64■■■□□ 2.34
SNRPA1-215ENST00000561187 SPECC1Q5M775 1068 aa29.64■■■□□ 2.34
SNRPA1-215ENST00000561187 PARM1Q6UWI2 310 aa29.64■■■□□ 2.34
SNRPA1-215ENST00000561187 TMEM130Q8N3G9 435 aa29.64■■■□□ 2.34
SNRPA1-215ENST00000561187 C18orf25Q96B23 403 aaPredicted RBP29.64■■■□□ 2.34
SNRPA1-215ENST00000561187 UROC1Q96N76 676 aa29.64■■■□□ 2.34
SNRPA1-215ENST00000561187 PNMA5Q96PV4 448 aa29.64■■■□□ 2.34
SNRPA1-215ENST00000561187 WNT16Q9UBV4 365 aa29.64■■■□□ 2.34
SNRPA1-215ENST00000561187 CDH7Q9ULB5 785 aa29.64■■■□□ 2.34
SNRPA1-215ENST00000561187 KIF3AQ9Y496 699 aa29.64■■■□□ 2.34
SNRPA1-215ENST00000561187 MYH15Q9Y2K3 1946 aa29.63■■■□□ 2.33
SNRPA1-215ENST00000561187 CITO14578 2027 aa29.63■■■□□ 2.33
SNRPA1-215ENST00000561187 NPHP3-ACAD11A0A0J9YXS1 232 aa29.63■■■□□ 2.33
SNRPA1-215ENST00000561187 ANHXE9PGG2 379 aa29.63■■■□□ 2.33
SNRPA1-215ENST00000561187 H3BQV1 296 aa29.63■■■□□ 2.33
SNRPA1-215ENST00000561187 ARPP19P56211 112 aa29.63■■■□□ 2.33
SNRPA1-215ENST00000561187 ATP2C1P98194 919 aaPredicted RBP29.63■■■□□ 2.33
SNRPA1-215ENST00000561187 MPZL3Q6UWV2 235 aa29.63■■■□□ 2.33
SNRPA1-215ENST00000561187 DTWD2Q8NBA8 298 aa29.63■■■□□ 2.33
SNRPA1-215ENST00000561187 FGF13Q92913 245 aa29.63■■■□□ 2.33
SNRPA1-215ENST00000561187 TMX3Q96JJ7 454 aa29.63■■■□□ 2.33
SNRPA1-215ENST00000561187 ACAP3Q96P50 834 aa29.63■■■□□ 2.33
SNRPA1-215ENST00000561187 RTP3Q9BQQ7 232 aa29.63■■■□□ 2.33
SNRPA1-215ENST00000561187 ARHGEF3Q9NR81 526 aa29.63■■■□□ 2.33
SNRPA1-215ENST00000561187 COL4A3Q01955 1670 aa29.63■■■□□ 2.33
SNRPA1-215ENST00000561187 MYH11P35749 1972 aa29.63■■■□□ 2.33
SNRPA1-215ENST00000561187 PTPRZ1P23471 2315 aaPredicted RBP29.62■■■□□ 2.33
SNRPA1-215ENST00000561187 ABLIM1O14639 778 aa29.62■■■□□ 2.33
SNRPA1-215ENST00000561187 ANGPT1Q15389 498 aa29.62■■■□□ 2.33
SNRPA1-215ENST00000561187 RILPL1Q5EBL4 403 aa29.62■■■□□ 2.33
SNRPA1-215ENST00000561187 NXPE3Q969Y0 559 aa29.62■■■□□ 2.33
SNRPA1-215ENST00000561187 CDK5RAP3Q96JB5 506 aa29.62■■■□□ 2.33
SNRPA1-215ENST00000561187 MEFVO15553 781 aaPredicted RBP29.61■■■□□ 2.33
SNRPA1-215ENST00000561187 TRAPPC3O43617 180 aa29.61■■■□□ 2.33
SNRPA1-215ENST00000561187 MCF2P10911 925 aa29.61■■■□□ 2.33
SNRPA1-215ENST00000561187 NBL1P41271 181 aa29.61■■■□□ 2.33
SNRPA1-215ENST00000561187 STRN3Q13033 797 aa29.61■■■□□ 2.33
SNRPA1-215ENST00000561187 ALKAL1Q6UXT8 129 aa29.61■■■□□ 2.33
SNRPA1-215ENST00000561187 ANKS3Q6ZW76 656 aa29.61■■■□□ 2.33
SNRPA1-215ENST00000561187 KXD1Q9BQD3 176 aa29.61■■■□□ 2.33
SNRPA1-215ENST00000561187 DNMT3BQ9UBC3 853 aaKnown RBP29.61■■■□□ 2.33
SNRPA1-215ENST00000561187 RIF1Q5UIP0 2472 aaKnown RBP29.61■■■□□ 2.33
SNRPA1-215ENST00000561187 PRR23AA6NEV1 266 aa29.6■■■□□ 2.33
SNRPA1-215ENST00000561187 DCNP07585 359 aaKnown RBP29.6■■■□□ 2.33
SNRPA1-215ENST00000561187 PROZP22891 400 aa29.6■■■□□ 2.33
SNRPA1-215ENST00000561187 HOXA9P31269 272 aa29.6■■■□□ 2.33
SNRPA1-215ENST00000561187 MATR3P43243 847 aaKnown RBP eCLIP29.6■■■□□ 2.33
SNRPA1-215ENST00000561187 PABPC1LQ4VXU2 614 aaKnown RBP29.6■■■□□ 2.33
SNRPA1-215ENST00000561187 XKR4Q5GH76 650 aa29.6■■■□□ 2.33
SNRPA1-215ENST00000561187 VARS2Q5ST30 1063 aaKnown RBP29.6■■■□□ 2.33
SNRPA1-215ENST00000561187 SLC38A7Q9NVC3 462 aa29.6■■■□□ 2.33
SNRPA1-215ENST00000561187 RBM19Q9Y4C8 960 aaKnown RBP29.6■■■□□ 2.33
SNRPA1-215ENST00000561187 NUB1Q9Y5A7 615 aa29.6■■■□□ 2.33
SNRPA1-215ENST00000561187 CENPBP07199 599 aaPredicted RBP29.59■■■□□ 2.33
SNRPA1-215ENST00000561187 PLS3P13797 630 aa29.59■■■□□ 2.33
SNRPA1-215ENST00000561187 GUCY2CP25092 1073 aa29.59■■■□□ 2.33
SNRPA1-215ENST00000561187 ROR1Q01973 937 aa29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms