RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 SRRDQ9UH36 339 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 ADGRE2Q9UHX3 823 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 HCN2Q9UL51 889 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 ZNF215Q9UL58 517 aaPredicted RBP2.27□□□□□ -2.05
RTF1-207ENST00000561076 AGTPBP1Q9UPW5 1226 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 PCDHA1Q9Y5I3 950 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 SNX8Q9Y5X2 465 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 B3GALT1Q9Y5Z6 326 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 CDY2AQ9Y6F7 541 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 IKBKGQ9Y6K9 419 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 RSF1Q96T23 1441 aaPredicted RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 TDRD9Q8NDG6 1382 aaKnown RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 MYPNQ86TC9 1320 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 SENP3-EIF4A1A0A087X0R7 540 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 A0A0B4J269 797 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 FAM234BA2RU67 622 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 PRAMEF22A3QJZ6 481 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 C7orf72A4D263 438 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 SLC35F4A4IF30 521 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 MEGF11A6BM72 1044 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 IQCJ-SCHIP1C9J366 451 aaPredicted RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 PTGES3LE9PB15 166 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 INO80B-WBP1J3KQ70 363 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 M0R082 166 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 AXIN1O15169 862 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 NKRFO15226 690 aaKnown RBP eCLIP2.26□□□□□ -2.05
RTF1-207ENST00000561076 SPTLC2O15270 562 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 ARHGAP6O43182 974 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 ASNA1O43681 348 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 HTATSF1O43719 755 aaKnown RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 AKR1B10O60218 316 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 GDF9O60383 454 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 DOK2O60496 412 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 GUCY1B2O75343 617 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 KRT38O76015 456 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 USP1O94782 785 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 ACTL6BO94805 426 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 CCNDBP1O95273 360 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 TNFRSF6BO95407 300 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 AFPP02771 609 aaKnown RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 AMY2AP04746 511 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 GNAI2P04899 355 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 CLTBP09497 229 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 HNRNPA1P09651 372 aaKnown RBP eCLIP2.26□□□□□ -2.05
RTF1-207ENST00000561076 FTH1P19P0C7X4 201 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 TGFB3P10600 412 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 RARBP10826 455 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 MTHFD1P11586 935 aaKnown RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 SCG2P13521 617 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 DRD2P14416 443 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 TYRP14679 529 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 GLULP15104 373 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 YBX3P16989 372 aaKnown RBP eCLIP2.26□□□□□ -2.05
RTF1-207ENST00000561076 SYN1P17600 705 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 PTPN1P18031 435 aaKnown RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 AMY2BP19961 511 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 SAT1P21673 171 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 SCP2P22307 547 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 ATP5F1P24539 256 aaPredicted RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 FPR2P25090 351 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 NFKBIAP25963 317 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 RPL10P27635 214 aaKnown RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 EEF1DP29692 281 aaKnown RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 ECHS1P30084 290 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 HPDP32754 393 aaPredicted RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 NTF4P34130 210 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 NNMTP40261 264 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 GPR15P49685 360 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 MCM2P49736 904 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 TUBP50607 506 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 AFF3P51826 1226 aaKnown RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 COPAP53621 1224 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 NR1H2P55055 460 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 EVCP57679 992 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 RPS16P62249 146 aaKnown RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 RPP30P78346 268 aaKnown RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 DLG4P78352 724 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 CDC42EP1Q00587 391 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 MC1RQ01726 317 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 CHRNDQ07001 517 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 CYP4F3Q08477 520 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 GOLGA8DPQ0D2H9 430 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 GALNT1Q10472 559 aaPredicted RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 EIF2B5Q13144 721 aaKnown RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 SLC13A2Q13183 592 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 TUSC3Q13454 348 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 EFR3AQ14156 821 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 UBAP2LQ14157 1087 aaKnown RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 ERV3-1Q14264 604 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 BECN1Q14457 450 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 COG2Q14746 738 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 RAB39AQ14964 217 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 KHDC1Q4VXA5 237 aaKnown RBP2.26□□□□□ -2.05
RTF1-207ENST00000561076 MROH9Q5TGP6 573 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 PRAMEF18Q5VWM3 479 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 NAA35Q5VZE5 725 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 STEAP3Q658P3 488 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 ATG16L1Q676U5 607 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 ANKRD34AQ69YU3 496 aa2.26□□□□□ -2.05
RTF1-207ENST00000561076 MCTP2Q6DN12 878 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms