RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 LRRN2O75325 713 aa18.44■□□□□ 0.54
HDDC3-206ENST00000561036 ABL1P00519 1130 aa18.44■□□□□ 0.54
HDDC3-206ENST00000561036 TNNC2P02585 160 aa18.44■□□□□ 0.54
HDDC3-206ENST00000561036 STAG3L1P0CL83 205 aa18.44■□□□□ 0.54
HDDC3-206ENST00000561036 PNMA6AP0CW24 399 aaPredicted RBP18.44■□□□□ 0.54
HDDC3-206ENST00000561036 EIF4BP23588 611 aaKnown RBP18.44■□□□□ 0.54
HDDC3-206ENST00000561036 TBXAS1P24557 533 aaPredicted RBP18.44■□□□□ 0.54
HDDC3-206ENST00000561036 GTF2F1P35269 517 aaKnown RBP eCLIP18.44■□□□□ 0.54
HDDC3-206ENST00000561036 CRYBB1P53674 252 aaPredicted RBP18.44■□□□□ 0.54
HDDC3-206ENST00000561036 TRIM32Q13049 653 aa18.44■□□□□ 0.54
HDDC3-206ENST00000561036 NCOA4Q13772 614 aa18.44■□□□□ 0.54
HDDC3-206ENST00000561036 LMBRD2Q68DH5 695 aaPredicted RBP18.44■□□□□ 0.54
HDDC3-206ENST00000561036 ALKBH5Q6P6C2 394 aaKnown RBP18.44■□□□□ 0.54
HDDC3-206ENST00000561036 SESTD1Q86VW0 696 aa18.44■□□□□ 0.54
HDDC3-206ENST00000561036 NT5DC4Q86YG4 428 aa18.44■□□□□ 0.54
HDDC3-206ENST00000561036 CD302Q8IX05 232 aa18.44■□□□□ 0.54
HDDC3-206ENST00000561036 SLC35F6Q8N357 371 aa18.44■□□□□ 0.54
HDDC3-206ENST00000561036 TATDN2Q93075 761 aa18.44■□□□□ 0.54
HDDC3-206ENST00000561036 ANKRD36BP1Q96IX9 119 aa18.44■□□□□ 0.54
HDDC3-206ENST00000561036 NAPGQ99747 312 aaPredicted RBP18.44■□□□□ 0.54
HDDC3-206ENST00000561036 AGPAT1Q99943 283 aa18.44■□□□□ 0.54
HDDC3-206ENST00000561036 TRIM10Q9UDY6 481 aa18.44■□□□□ 0.54
HDDC3-206ENST00000561036 GTF2IRD1Q9UHL9 959 aa18.44■□□□□ 0.54
HDDC3-206ENST00000561036 THSD7BQ9C0I4 1608 aa18.44■□□□□ 0.54
HDDC3-206ENST00000561036 DDX3XO00571 662 aaKnown RBP eCLIP18.43■□□□□ 0.546e-21■■■■□ 21.8
HDDC3-206ENST00000561036 TACC1O75410 805 aa18.43■□□□□ 0.54
HDDC3-206ENST00000561036 CSDE1O75534 798 aaKnown RBP18.43■□□□□ 0.54
HDDC3-206ENST00000561036 PGK1P00558 417 aa18.43■□□□□ 0.54
HDDC3-206ENST00000561036 ELNP15502 786 aa18.43■□□□□ 0.54
HDDC3-206ENST00000561036 TNFAIP3P21580 790 aa18.43■□□□□ 0.54
HDDC3-206ENST00000561036 YY1P25490 414 aa18.43■□□□□ 0.54
HDDC3-206ENST00000561036 CCND3P30281 292 aaPredicted RBP18.43■□□□□ 0.54
HDDC3-206ENST00000561036 GRM5P41594 1212 aa18.43■□□□□ 0.54
HDDC3-206ENST00000561036 NOTUMQ6P988 496 aa18.43■□□□□ 0.54
HDDC3-206ENST00000561036 CATSPER4Q7RTX7 472 aa18.43■□□□□ 0.54
HDDC3-206ENST00000561036 TRAPPC11Q7Z392 1133 aa18.43■□□□□ 0.54
HDDC3-206ENST00000561036 PCSK9Q8NBP7 692 aaKnown RBP18.43■□□□□ 0.54
HDDC3-206ENST00000561036 TRIM58Q8NG06 486 aa18.43■□□□□ 0.54
HDDC3-206ENST00000561036 OLIG1Q8TAK6 271 aa18.43■□□□□ 0.54
HDDC3-206ENST00000561036 TAF4BQ92750 862 aa18.43■□□□□ 0.54
HDDC3-206ENST00000561036 KAT5Q92993 513 aa18.43■□□□□ 0.54
HDDC3-206ENST00000561036 FAXDC2Q96IV6 333 aa18.43■□□□□ 0.54
HDDC3-206ENST00000561036 CPB2Q96IY4 423 aa18.43■□□□□ 0.54
HDDC3-206ENST00000561036 SCN10AQ9Y5Y9 1956 aa18.42■□□□□ 0.54
HDDC3-206ENST00000561036 FKTNO75072 461 aa18.42■□□□□ 0.54
HDDC3-206ENST00000561036 CABYRO75952 493 aa18.42■□□□□ 0.54
HDDC3-206ENST00000561036 URI1O94763 535 aaPredicted RBP18.42■□□□□ 0.54
HDDC3-206ENST00000561036 ASS1P00966 412 aaKnown RBP18.42■□□□□ 0.54
HDDC3-206ENST00000561036 TMEM191BP0C7N4 346 aa18.42■□□□□ 0.54
HDDC3-206ENST00000561036 HOXA11P31270 313 aaPredicted RBP18.42■□□□□ 0.54
HDDC3-206ENST00000561036 BPIFB4P59827 614 aa18.42■□□□□ 0.54
HDDC3-206ENST00000561036 SGSM1Q2NKQ1 1148 aa18.42■□□□□ 0.54
HDDC3-206ENST00000561036 NBPF20Q3BBV1 942 aa18.42■□□□□ 0.54
HDDC3-206ENST00000561036 CCSAPQ6IQ19 270 aaPredicted RBP18.42■□□□□ 0.54
HDDC3-206ENST00000561036 SLC27A1Q6PCB7 646 aa18.42■□□□□ 0.54
HDDC3-206ENST00000561036 CXCL17Q6UXB2 119 aa18.42■□□□□ 0.54
HDDC3-206ENST00000561036 RPAINQ86UA6 219 aa18.42■□□□□ 0.54
HDDC3-206ENST00000561036 RSPH3Q86UC2 560 aa18.42■□□□□ 0.54
HDDC3-206ENST00000561036 RAET1EQ8TD07 263 aa18.42■□□□□ 0.54
HDDC3-206ENST00000561036 FAM212AQ96EL1 285 aa18.42■□□□□ 0.54
HDDC3-206ENST00000561036 ACAP3Q96P50 834 aa18.42■□□□□ 0.54
HDDC3-206ENST00000561036 NOX5Q96PH1 765 aa18.42■□□□□ 0.54
HDDC3-206ENST00000561036 PI4K2AQ9BTU6 479 aa18.42■□□□□ 0.54
HDDC3-206ENST00000561036 PLEKHA5Q9HAU0 1116 aa18.42■□□□□ 0.54
HDDC3-206ENST00000561036 ANO9A1A5B4 782 aa18.41■□□□□ 0.54
HDDC3-206ENST00000561036 H2AFZP0C0S5 128 aa18.41■□□□□ 0.54
HDDC3-206ENST00000561036 CXCL8P10145 99 aa18.41■□□□□ 0.54
HDDC3-206ENST00000561036 USP8P40818 1118 aa18.41■□□□□ 0.54
HDDC3-206ENST00000561036 NOP14P78316 857 aaKnown RBP18.41■□□□□ 0.54
HDDC3-206ENST00000561036 ZNF200P98182 395 aaPredicted RBP18.41■□□□□ 0.54
HDDC3-206ENST00000561036 TFAMQ00059 246 aaKnown RBP18.41■□□□□ 0.54
HDDC3-206ENST00000561036 TMEM62Q0P6H9 643 aa18.41■□□□□ 0.54
HDDC3-206ENST00000561036 TRPC3Q13507 836 aa18.41■□□□□ 0.54
HDDC3-206ENST00000561036 CUL2Q13617 745 aa18.41■□□□□ 0.54
HDDC3-206ENST00000561036 SNX17Q15036 470 aa18.41■□□□□ 0.54
HDDC3-206ENST00000561036 IFI16Q16666 785 aaKnown RBP18.41■□□□□ 0.54
HDDC3-206ENST00000561036 H2AFVQ71UI9 128 aa18.41■□□□□ 0.54
HDDC3-206ENST00000561036 CDR2LQ86X02 465 aaPredicted RBP18.41■□□□□ 0.54
HDDC3-206ENST00000561036 CEP120Q8N960 986 aa18.41■□□□□ 0.54
HDDC3-206ENST00000561036 LNX1Q8TBB1 728 aaPredicted RBP18.41■□□□□ 0.54
HDDC3-206ENST00000561036 U2AF1L4Q8WU68 220 aaKnown RBP18.41■□□□□ 0.54
HDDC3-206ENST00000561036 ALS2CR12Q96Q35 445 aa18.41■□□□□ 0.54
HDDC3-206ENST00000561036 OSMRQ99650 979 aa18.41■□□□□ 0.54
HDDC3-206ENST00000561036 CCDC94Q9BW85 323 aaPredicted RBP18.41■□□□□ 0.54
HDDC3-206ENST00000561036 MTMR12Q9C0I1 747 aa18.41■□□□□ 0.54
HDDC3-206ENST00000561036 CDHR5Q9HBB8 845 aa18.41■□□□□ 0.54
HDDC3-206ENST00000561036 DDX20Q9UHI6 824 aaKnown RBP18.41■□□□□ 0.54
HDDC3-206ENST00000561036 TFR2Q9UP52 801 aa18.41■□□□□ 0.54
HDDC3-206ENST00000561036 CNTN6Q9UQ52 1028 aa18.41■□□□□ 0.54
HDDC3-206ENST00000561036 DERAQ9Y315 318 aa18.41■□□□□ 0.54
HDDC3-206ENST00000561036 C2CD2Q9Y426 696 aa18.41■□□□□ 0.54
HDDC3-206ENST00000561036 DUSP10Q9Y6W6 482 aa18.41■□□□□ 0.54
HDDC3-206ENST00000561036 MROH7Q68CQ1 1323 aa18.41■□□□□ 0.54
HDDC3-206ENST00000561036 UQCRHLA0A096LP55 91 aa18.4■□□□□ 0.54
HDDC3-206ENST00000561036 A0A0A6YYK5 440 aaPredicted RBP18.4■□□□□ 0.54
HDDC3-206ENST00000561036 MACROD2A1Z1Q3 448 aa18.4■□□□□ 0.54
HDDC3-206ENST00000561036 LACTBL1A8MY62 500 aa18.4■□□□□ 0.54
HDDC3-206ENST00000561036 CYP26A1O43174 497 aa18.4■□□□□ 0.54
HDDC3-206ENST00000561036 SLU7O95391 586 aaKnown RBP18.4■□□□□ 0.54
HDDC3-206ENST00000561036 UQCRHP07919 91 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms