RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 ZDHHC9Q9Y397 364 aa11.81□□□□□ -0.52
TPM1-227ENST00000560970 ZFP37Q9Y6Q3 630 aaPredicted RBP11.81□□□□□ -0.52
TPM1-227ENST00000560970 NUMBLQ9Y6R0 609 aa11.81□□□□□ -0.52
TPM1-227ENST00000560970 ARHGEF35A5YM69 484 aa11.8□□□□□ -0.52
TPM1-227ENST00000560970 CASTOR2A6NHX0 329 aa11.8□□□□□ -0.52
TPM1-227ENST00000560970 RECQL4O94761 1208 aa11.8□□□□□ -0.52
TPM1-227ENST00000560970 HNRNPA1P09651 372 aaKnown RBP eCLIP11.8□□□□□ -0.52
TPM1-227ENST00000560970 LAMP2P13473 410 aa11.8□□□□□ -0.52
TPM1-227ENST00000560970 FSHRP23945 695 aa11.8□□□□□ -0.52
TPM1-227ENST00000560970 HOXA9P31269 272 aa11.8□□□□□ -0.52
TPM1-227ENST00000560970 NASPP49321 788 aaPredicted RBP11.8□□□□□ -0.52
TPM1-227ENST00000560970 ZRSR1Q15695 479 aaKnown RBP11.8□□□□□ -0.52
TPM1-227ENST00000560970 PSMD5Q16401 504 aa11.8□□□□□ -0.52
TPM1-227ENST00000560970 FAM187BQ17R55 369 aa11.8□□□□□ -0.52
TPM1-227ENST00000560970 PHLDB3Q6NSJ2 640 aa11.8□□□□□ -0.52
TPM1-227ENST00000560970 PDXDC1Q6P996 788 aa11.8□□□□□ -0.52
TPM1-227ENST00000560970 LILRA6Q6PI73 481 aa11.8□□□□□ -0.52
TPM1-227ENST00000560970 ZC3H14Q6PJT7 736 aaKnown RBP11.8□□□□□ -0.52
TPM1-227ENST00000560970 PADI6Q6TGC4 694 aa11.8□□□□□ -0.52
TPM1-227ENST00000560970 PRSS55Q6UWB4 352 aaPredicted RBP11.8□□□□□ -0.52
TPM1-227ENST00000560970 USP49Q70CQ1 688 aa11.8□□□□□ -0.52
TPM1-227ENST00000560970 SLC44A3Q8N4M1 653 aa11.8□□□□□ -0.52
TPM1-227ENST00000560970 PIK3R5Q8WYR1 880 aa11.8□□□□□ -0.52
TPM1-227ENST00000560970 BSNDQ8WZ55 320 aa11.8□□□□□ -0.52
TPM1-227ENST00000560970 CHAMP1Q96JM3 812 aa11.8□□□□□ -0.52
TPM1-227ENST00000560970 PAAF1Q9BRP4 392 aa11.8□□□□□ -0.52
TPM1-227ENST00000560970 RUSC1Q9BVN2 902 aa11.8□□□□□ -0.52
TPM1-227ENST00000560970 C2orf40Q9H1Z8 148 aa11.8□□□□□ -0.52
TPM1-227ENST00000560970 PDZD7Q9H5P4 517 aa11.8□□□□□ -0.52
TPM1-227ENST00000560970 POLD4Q9HCU8 107 aa11.8□□□□□ -0.52
TPM1-227ENST00000560970 STK24Q9Y6E0 443 aa11.8□□□□□ -0.52
TPM1-227ENST00000560970 MORC2Q9Y6X9 1032 aaPredicted RBP11.8□□□□□ -0.52
TPM1-227ENST00000560970 DNAH14Q0VDD8 3507 aa11.8□□□□□ -0.52
TPM1-227ENST00000560970 TCHHQ07283 1943 aa11.8□□□□□ -0.52
TPM1-227ENST00000560970 KIF26AQ9ULI4 1882 aaPredicted RBP11.79□□□□□ -0.52
TPM1-227ENST00000560970 PTPRZ1P23471 2315 aaPredicted RBP11.79□□□□□ -0.52
TPM1-227ENST00000560970 OTOGLQ3ZCN5 2332 aa11.79□□□□□ -0.52
TPM1-227ENST00000560970 STK25O00506 426 aa11.79□□□□□ -0.52
TPM1-227ENST00000560970 PTGESO14684 152 aa11.79□□□□□ -0.52
TPM1-227ENST00000560970 TADA2AO75478 443 aa11.79□□□□□ -0.52
TPM1-227ENST00000560970 C8AP07357 584 aa11.79□□□□□ -0.52
TPM1-227ENST00000560970 POU2F2P09086 479 aa11.79□□□□□ -0.52
TPM1-227ENST00000560970 LONP1P36776 959 aaKnown RBP11.79□□□□□ -0.52
TPM1-227ENST00000560970 ELAVL2Q12926 359 aaKnown RBP11.79□□□□□ -0.52
TPM1-227ENST00000560970 PRPF4BQ13523 1007 aaKnown RBP11.79□□□□□ -0.52
TPM1-227ENST00000560970 KARSQ15046 597 aaKnown RBP11.79□□□□□ -0.52
TPM1-227ENST00000560970 MAPK6Q16659 721 aa11.79□□□□□ -0.52
TPM1-227ENST00000560970 TMEM132AQ24JP5 1023 aa11.79□□□□□ -0.52
TPM1-227ENST00000560970 MTSS1LQ765P7 747 aa11.79□□□□□ -0.52
TPM1-227ENST00000560970 ERMP1Q7Z2K6 904 aa11.79□□□□□ -0.52
TPM1-227ENST00000560970 LINC00301Q8NCQ3 95 aa11.79□□□□□ -0.52
TPM1-227ENST00000560970 PJA1Q8NG27 643 aa11.79□□□□□ -0.52
TPM1-227ENST00000560970 RABGGTAQ92696 567 aa11.79□□□□□ -0.52
TPM1-227ENST00000560970 AK8Q96MA6 479 aa11.79□□□□□ -0.52
TPM1-227ENST00000560970 ADPGKQ9BRR6 497 aa11.79□□□□□ -0.52
TPM1-227ENST00000560970 TTPALQ9BTX7 342 aa11.79□□□□□ -0.52
TPM1-227ENST00000560970 CCDC113Q9H0I3 377 aa11.79□□□□□ -0.52
TPM1-227ENST00000560970 SEMA4AQ9H3S1 761 aa11.79□□□□□ -0.52
TPM1-227ENST00000560970 TFIP11Q9UBB9 837 aaKnown RBP11.79□□□□□ -0.52
TPM1-227ENST00000560970 SRPRBQ9Y5M8 271 aaKnown RBP11.79□□□□□ -0.52
TPM1-227ENST00000560970 CACNA1IQ9P0X4 2223 aa11.78□□□□□ -0.52
TPM1-227ENST00000560970 XYLBO75191 536 aa11.78□□□□□ -0.52
TPM1-227ENST00000560970 PRKCBP05771 671 aa11.78□□□□□ -0.52
TPM1-227ENST00000560970 THP07101 528 aa11.78□□□□□ -0.52
TPM1-227ENST00000560970 CYP11B2P19099 503 aa11.78□□□□□ -0.52
TPM1-227ENST00000560970 PLCG1P19174 1290 aa11.78□□□□□ -0.52
TPM1-227ENST00000560970 NAMPTP43490 491 aa11.78□□□□□ -0.52
TPM1-227ENST00000560970 SLC12A3P55017 1021 aa11.78□□□□□ -0.52
TPM1-227ENST00000560970 MAPK7Q13164 816 aa11.78□□□□□ -0.52
TPM1-227ENST00000560970 BECN1Q14457 450 aa11.78□□□□□ -0.52
TPM1-227ENST00000560970 SLC39A14Q15043 492 aa11.78□□□□□ -0.52
TPM1-227ENST00000560970 PPP2R5AQ15172 486 aa11.78□□□□□ -0.52
TPM1-227ENST00000560970 DCAF4L1Q3SXM0 396 aa11.78□□□□□ -0.52
TPM1-227ENST00000560970 PPM1LQ5SGD2 360 aa11.78□□□□□ -0.52
TPM1-227ENST00000560970 FAM171A1Q5VUB5 890 aa11.78□□□□□ -0.52
TPM1-227ENST00000560970 DCLRE1AQ6PJP8 1040 aa11.78□□□□□ -0.52
TPM1-227ENST00000560970 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.78□□□□□ -0.52
TPM1-227ENST00000560970 GRASPQ7Z6J2 395 aaPredicted RBP11.78□□□□□ -0.52
TPM1-227ENST00000560970 DAW1Q8N136 415 aa11.78□□□□□ -0.52
TPM1-227ENST00000560970 EPSTI1Q96J88 318 aa11.78□□□□□ -0.52
TPM1-227ENST00000560970 FZD8Q9H461 694 aa11.78□□□□□ -0.52
TPM1-227ENST00000560970 BLOC1S4Q9NUP1 217 aa11.78□□□□□ -0.52
TPM1-227ENST00000560970 CDH7Q9ULB5 785 aa11.78□□□□□ -0.52
TPM1-227ENST00000560970 DNM3Q9UQ16 869 aa11.78□□□□□ -0.52
TPM1-227ENST00000560970 OBSL1O75147 1896 aa11.78□□□□□ -0.52
TPM1-227ENST00000560970 A0A087X0B3 334 aa11.77□□□□□ -0.53
TPM1-227ENST00000560970 TMEM189-UBE2V1I3L0A0 370 aa11.77□□□□□ -0.53
TPM1-227ENST00000560970 LMNAP02545 664 aaKnown RBP11.77□□□□□ -0.53
TPM1-227ENST00000560970 EDN1P05305 212 aa11.77□□□□□ -0.53
TPM1-227ENST00000560970 DCNP07585 359 aaKnown RBP11.77□□□□□ -0.53
TPM1-227ENST00000560970 ID4P47928 161 aa11.77□□□□□ -0.53
TPM1-227ENST00000560970 DNM1Q05193 864 aaKnown RBP11.77□□□□□ -0.53
TPM1-227ENST00000560970 STK38Q15208 465 aa11.77□□□□□ -0.53
TPM1-227ENST00000560970 NAB2Q15742 525 aa11.77□□□□□ -0.53
TPM1-227ENST00000560970 RINT1Q6NUQ1 792 aa11.77□□□□□ -0.53
TPM1-227ENST00000560970 C1orf186Q6ZWK4 172 aa11.77□□□□□ -0.53
TPM1-227ENST00000560970 CEP57Q86XR8 500 aa11.77□□□□□ -0.53
TPM1-227ENST00000560970 DEPTORQ8TB45 409 aa11.77□□□□□ -0.53
TPM1-227ENST00000560970 LNX1Q8TBB1 728 aaPredicted RBP11.77□□□□□ -0.53
TPM1-227ENST00000560970 SLC7A14Q8TBB6 771 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms