RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	C1orf186	Q6ZWK4	172 aa		15	□□□□□ -0.01
RNF31-223	ENST00000560754	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	15	□□□□□ -0.01
RNF31-223	ENST00000560754	DAW1	Q8N136	415 aa		15	□□□□□ -0.01
RNF31-223	ENST00000560754	FGF14	Q92915	247 aa		15	□□□□□ -0.01
RNF31-223	ENST00000560754	NKD2	Q969F2	451 aa	Predicted RBP	15	□□□□□ -0.01
RNF31-223	ENST00000560754	C17orf75	Q9HAS0	396 aa		15	□□□□□ -0.01
RNF31-223	ENST00000560754	NOL7	Q9UMY1	257 aa	Known RBP	15	□□□□□ -0.01
RNF31-223	ENST00000560754	DNM3	Q9UQ16	869 aa		15	□□□□□ -0.01
RNF31-223	ENST00000560754	RBM19	Q9Y4C8	960 aa	Known RBP	15	□□□□□ -0.01
RNF31-223	ENST00000560754	PCDHB6	Q9Y5E3	794 aa		15	□□□□□ -0.01
RNF31-223	ENST00000560754	NUMBL	Q9Y6R0	609 aa		15	□□□□□ -0.01
RNF31-223	ENST00000560754		E9PMD0	336 aa		14.99	□□□□□ -0.01
RNF31-223	ENST00000560754	STK25	O00506	426 aa		14.99	□□□□□ -0.01
RNF31-223	ENST00000560754	TBC1D4	O60343	1298 aa		14.99	□□□□□ -0.01
RNF31-223	ENST00000560754	XYLB	O75191	536 aa		14.99	□□□□□ -0.01
RNF31-223	ENST00000560754	ABLIM3	O94929	683 aa		14.99	□□□□□ -0.01
RNF31-223	ENST00000560754	PROZ	P22891	400 aa		14.99	□□□□□ -0.01
RNF31-223	ENST00000560754	PRPH	P41219	470 aa		14.99	□□□□□ -0.01
RNF31-223	ENST00000560754	GPC5	P78333	572 aa		14.99	□□□□□ -0.01
RNF31-223	ENST00000560754	NTHL1	P78549	312 aa		14.99	□□□□□ -0.01
RNF31-223	ENST00000560754	LIN9	Q5TKA1	542 aa		14.99	□□□□□ -0.01
RNF31-223	ENST00000560754	RINT1	Q6NUQ1	792 aa		14.99	□□□□□ -0.01
RNF31-223	ENST00000560754	GET4	Q7L5D6	327 aa	Predicted RBP	14.99	□□□□□ -0.01
RNF31-223	ENST00000560754	TAS1R3	Q7RTX0	852 aa		14.99	□□□□□ -0.01
RNF31-223	ENST00000560754	FAM184A	Q8NB25	1140 aa		14.99	□□□□□ -0.01
RNF31-223	ENST00000560754	C3orf58	Q8NDZ4	430 aa		14.99	□□□□□ -0.01
RNF31-223	ENST00000560754	ZNF461	Q8TAF7	563 aa		14.99	□□□□□ -0.01
RNF31-223	ENST00000560754	FGF13	Q92913	245 aa		14.99	□□□□□ -0.01
RNF31-223	ENST00000560754	DDX27	Q96GQ7	796 aa	Known RBP	14.99	□□□□□ -0.01
RNF31-223	ENST00000560754	MMTAG2	Q9BU76	263 aa	Known RBP	14.99	□□□□□ -0.01
RNF31-223	ENST00000560754	RAB34	Q9BZG1	259 aa		14.99	□□□□□ -0.01
RNF31-223	ENST00000560754	SEMA4A	Q9H3S1	761 aa		14.99	□□□□□ -0.01
RNF31-223	ENST00000560754	TBC1D17	Q9HA65	648 aa		14.99	□□□□□ -0.01
RNF31-223	ENST00000560754	ARHGAP28	Q9P2N2	729 aa		14.99	□□□□□ -0.01
RNF31-223	ENST00000560754	DNMT3B	Q9UBC3	853 aa	Known RBP	14.99	□□□□□ -0.01
RNF31-223	ENST00000560754	KCNH3	Q9ULD8	1083 aa		14.99	□□□□□ -0.01
RNF31-223	ENST00000560754	CA14	Q9ULX7	337 aa		14.99	□□□□□ -0.01
RNF31-223	ENST00000560754	SIT1	Q9Y3P8	196 aa		14.99	□□□□□ -0.01
RNF31-223	ENST00000560754	PDCD11	Q14690	1871 aa	Known RBP	14.99	□□□□□ -0.01
RNF31-223	ENST00000560754	ABLIM1	O14639	778 aa		14.98	□□□□□ -0.01
RNF31-223	ENST00000560754	CCL16	O15467	120 aa		14.98	□□□□□ -0.01
RNF31-223	ENST00000560754	KCNE1	P15382	129 aa		14.98	□□□□□ -0.01
RNF31-223	ENST00000560754	PEX3	P56589	373 aa		14.98	□□□□□ -0.01
RNF31-223	ENST00000560754	SOX4	Q06945	474 aa	Predicted RBP	14.98	□□□□□ -0.01
RNF31-223	ENST00000560754	MAPK7	Q13164	816 aa		14.98	□□□□□ -0.01
RNF31-223	ENST00000560754	GNL2	Q13823	731 aa	Known RBP	14.98	□□□□□ -0.01
RNF31-223	ENST00000560754	MRPL58	Q14197	206 aa	Known RBP	14.98	□□□□□ -0.01
RNF31-223	ENST00000560754	GLRA4	Q5JXX5	417 aa		14.98	□□□□□ -0.01
RNF31-223	ENST00000560754	SLC8B1	Q6J4K2	584 aa		14.98	□□□□□ -0.01
RNF31-223	ENST00000560754	ANKS3	Q6ZW76	656 aa		14.98	□□□□□ -0.01
RNF31-223	ENST00000560754	KCTD17	Q8N5Z5	321 aa		14.98	□□□□□ -0.01
RNF31-223	ENST00000560754	CEP120	Q8N960	986 aa		14.98	□□□□□ -0.01
RNF31-223	ENST00000560754	ITFG1	Q8TB96	612 aa		14.98	□□□□□ -0.01
RNF31-223	ENST00000560754	SLC7A14	Q8TBB6	771 aa		14.98	□□□□□ -0.01
RNF31-223	ENST00000560754	SNX29	Q8TEQ0	813 aa		14.98	□□□□□ -0.01
RNF31-223	ENST00000560754	ZMAT2	Q96NC0	199 aa	Known RBP	14.98	□□□□□ -0.01
RNF31-223	ENST00000560754	DDX23	Q9BUQ8	820 aa	Known RBP	14.98	□□□□□ -0.01
RNF31-223	ENST00000560754	CDT1	Q9H211	546 aa		14.98	□□□□□ -0.01
RNF31-223	ENST00000560754	AVEN	Q9NQS1	362 aa	Predicted RBP	14.98	□□□□□ -0.01
RNF31-223	ENST00000560754	ARHGEF3	Q9NR81	526 aa		14.98	□□□□□ -0.01
RNF31-223	ENST00000560754	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	14.98	□□□□□ -0.01
RNF31-223	ENST00000560754	TOPORS	Q9NS56	1045 aa	Predicted RBP	14.98	□□□□□ -0.01
RNF31-223	ENST00000560754	SLC38A7	Q9NVC3	462 aa		14.98	□□□□□ -0.01
RNF31-223	ENST00000560754	CDY1	Q9Y6F8	540 aa		14.98	□□□□□ -0.01
RNF31-223	ENST00000560754	CACNA1A	O00555	2505 aa		14.98	□□□□□ -0.01
RNF31-223	ENST00000560754	MIA3	Q5JRA6	1907 aa		14.98	□□□□□ -0.01
RNF31-223	ENST00000560754	PHLPP2	Q6ZVD8	1323 aa		14.97	□□□□□ -0.01
RNF31-223	ENST00000560754	OTOGL	Q3ZCN5	2332 aa		14.97	□□□□□ -0.01
RNF31-223	ENST00000560754	CCDC169	A6NNP5	214 aa		14.97	□□□□□ -0.01
RNF31-223	ENST00000560754	HIP1R	O75146	1068 aa		14.97	□□□□□ -0.01
RNF31-223	ENST00000560754	MCF2	P10911	925 aa		14.97	□□□□□ -0.01
RNF31-223	ENST00000560754	TKT	P29401	623 aa	Known RBP	14.97	□□□□□ -0.01
RNF31-223	ENST00000560754	CDC25A	P30304	524 aa		14.97	□□□□□ -0.01
RNF31-223	ENST00000560754	RPL9	P32969	192 aa	Known RBP	14.97	□□□□□ -0.01
RNF31-223	ENST00000560754	BRCC3	P46736	316 aa		14.97	□□□□□ -0.01
RNF31-223	ENST00000560754	HYI	Q5T013	277 aa		14.97	□□□□□ -0.01
RNF31-223	ENST00000560754	KRT79	Q5XKE5	535 aa		14.97	□□□□□ -0.01
RNF31-223	ENST00000560754	MTSS1L	Q765P7	747 aa		14.97	□□□□□ -0.01
RNF31-223	ENST00000560754	KCNK18	Q7Z418	384 aa		14.97	□□□□□ -0.01
RNF31-223	ENST00000560754	ST13P5	Q8NFI4	369 aa	Predicted RBP	14.97	□□□□□ -0.01
RNF31-223	ENST00000560754	SHD	Q96IW2	340 aa		14.97	□□□□□ -0.01
RNF31-223	ENST00000560754	DRC1	Q96MC2	740 aa		14.97	□□□□□ -0.01
RNF31-223	ENST00000560754	ACAP3	Q96P50	834 aa		14.97	□□□□□ -0.01
RNF31-223	ENST00000560754	TIPIN	Q9BVW5	301 aa		14.97	□□□□□ -0.01
RNF31-223	ENST00000560754	CCDC94	Q9BW85	323 aa	Predicted RBP	14.97	□□□□□ -0.01
RNF31-223	ENST00000560754	TARS2	Q9BW92	718 aa	Known RBP	14.97	□□□□□ -0.01
RNF31-223	ENST00000560754	MRPL4	Q9BYD3	311 aa	Known RBP	14.97	□□□□□ -0.01
RNF31-223	ENST00000560754	GOLGA2P5	Q9HBQ8	144 aa		14.97	□□□□□ -0.01
RNF31-223	ENST00000560754	HCFC1R1	Q9NWW0	138 aa		14.97	□□□□□ -0.01
RNF31-223	ENST00000560754	KCNG1	Q9UIX4	513 aa		14.97	□□□□□ -0.01
RNF31-223	ENST00000560754	DMXL1	Q9Y485	3027 aa		14.96	□□□□□ -0.01
RNF31-223	ENST00000560754	DCHS1	Q96JQ0	3298 aa		14.96	□□□□□ -0.01
RNF31-223	ENST00000560754	ARHGEF37	A1IGU5	675 aa		14.96	□□□□□ -0.01
RNF31-223	ENST00000560754	PP2D1	A8MPX8	630 aa		14.96	□□□□□ -0.01
RNF31-223	ENST00000560754	MEFV	O15553	781 aa	Predicted RBP	14.96	□□□□□ -0.01
RNF31-223	ENST00000560754	GUCY2C	P25092	1073 aa		14.96	□□□□□ -0.01
RNF31-223	ENST00000560754	YARS	P54577	528 aa	Known RBP	14.96	□□□□□ -0.01
RNF31-223	ENST00000560754	SLC44A4	Q53GD3	710 aa		14.96	□□□□□ -0.01
RNF31-223	ENST00000560754	POTEH	Q6S545	545 aa		14.96	□□□□□ -0.01
RNF31-223	ENST00000560754	DTHD1	Q6ZMT9	781 aa		14.96	□□□□□ -0.01

Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms