RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 SDHBP21912 280 aa22.57■■□□□ 1.2
PSEN1-225ENST00000560005 MLF2Q15773 248 aaPredicted RBP22.57■■□□□ 1.2
PSEN1-225ENST00000560005 CALCRLQ16602 461 aa22.57■■□□□ 1.2
PSEN1-225ENST00000560005 FUT10Q6P4F1 479 aa22.57■■□□□ 1.2
PSEN1-225ENST00000560005 RBM43Q6ZSC3 357 aaKnown RBP22.57■■□□□ 1.2
PSEN1-225ENST00000560005 GRASPQ7Z6J2 395 aaPredicted RBP22.57■■□□□ 1.2
PSEN1-225ENST00000560005 ETNPPLQ8TBG4 499 aa22.57■■□□□ 1.2
PSEN1-225ENST00000560005 ATRIPQ8WXE1 791 aa22.57■■□□□ 1.2
PSEN1-225ENST00000560005 DDX23Q9BUQ8 820 aaKnown RBP22.57■■□□□ 1.2
PSEN1-225ENST00000560005 FNIP2Q9P278 1114 aa22.57■■□□□ 1.2
PSEN1-225ENST00000560005 CDH7Q9ULB5 785 aa22.57■■□□□ 1.2
PSEN1-225ENST00000560005 PCDHGA2Q9Y5H1 932 aa22.57■■□□□ 1.2
PSEN1-225ENST00000560005 CHD8Q9HCK8 2581 aa22.57■■□□□ 1.2
PSEN1-225ENST00000560005 PATJQ8NI35 1801 aa22.57■■□□□ 1.2
PSEN1-225ENST00000560005 MARCH6O60337 910 aa22.56■■□□□ 1.2
PSEN1-225ENST00000560005 ERLIN2O94905 339 aa22.56■■□□□ 1.2
PSEN1-225ENST00000560005 NTHL1P78549 312 aa22.56■■□□□ 1.2
PSEN1-225ENST00000560005 USP41Q3LFD5 358 aa22.56■■□□□ 1.2
PSEN1-225ENST00000560005 L1TD1Q5T7N2 865 aaKnown RBP22.56■■□□□ 1.2
PSEN1-225ENST00000560005 GPR161Q8N6U8 529 aaKnown RBP22.56■■□□□ 1.2
PSEN1-225ENST00000560005 RNF149Q8NC42 400 aa22.56■■□□□ 1.2
PSEN1-225ENST00000560005 BORCS6Q96GS4 357 aa22.56■■□□□ 1.2
PSEN1-225ENST00000560005 CEP170P1Q96L14 293 aa22.56■■□□□ 1.2
PSEN1-225ENST00000560005 APOL6Q9BWW8 343 aa22.56■■□□□ 1.2
PSEN1-225ENST00000560005 DHX33Q9H6R0 707 aaKnown RBP22.56■■□□□ 1.2
PSEN1-225ENST00000560005 DDX25Q9UHL0 483 aaKnown RBP22.56■■□□□ 1.2
PSEN1-225ENST00000560005 TDRD15B5MCY1 1934 aaKnown RBP22.56■■□□□ 1.2
PSEN1-225ENST00000560005 MAP1BP46821 2468 aaKnown RBP22.56■■□□□ 1.2
PSEN1-225ENST00000560005 FAM170BA6NMN3 283 aa22.55■■□□□ 1.2
PSEN1-225ENST00000560005 EML1O00423 815 aa22.55■■□□□ 1.2
PSEN1-225ENST00000560005 TBX3O15119 743 aa22.55■■□□□ 1.2
PSEN1-225ENST00000560005 CCDC192P0DO97 292 aa22.55■■□□□ 1.2
PSEN1-225ENST00000560005 QARSP47897 775 aaKnown RBP22.55■■□□□ 1.2
PSEN1-225ENST00000560005 PRKCQQ04759 706 aa22.55■■□□□ 1.2
PSEN1-225ENST00000560005 PDIA5Q14554 519 aa22.55■■□□□ 1.2
PSEN1-225ENST00000560005 SLC44A4Q53GD3 710 aa22.55■■□□□ 1.2
PSEN1-225ENST00000560005 SLFN12Q8IYM2 578 aa22.55■■□□□ 1.2
PSEN1-225ENST00000560005 RABGGTAQ92696 567 aa22.55■■□□□ 1.2
PSEN1-225ENST00000560005 MBOAT7Q96N66 472 aa22.55■■□□□ 1.2
PSEN1-225ENST00000560005 TSPY26PQ9H489 355 aa22.55■■□□□ 1.2
PSEN1-225ENST00000560005 CDV3Q9UKY7 258 aaKnown RBP22.55■■□□□ 1.2
PSEN1-225ENST00000560005 SMG5Q9UPR3 1016 aaKnown RBP22.55■■□□□ 1.2
PSEN1-225ENST00000560005 TSPAN1O60635 241 aa22.54■■□□□ 1.2
PSEN1-225ENST00000560005 CAVIN2O95810 425 aa22.54■■□□□ 1.2
PSEN1-225ENST00000560005 CD72P21854 359 aa22.54■■□□□ 1.2
PSEN1-225ENST00000560005 CREMQ03060 361 aa22.54■■□□□ 1.2
PSEN1-225ENST00000560005 NOTUMQ6P988 496 aa22.54■■□□□ 1.2
PSEN1-225ENST00000560005 SASS6Q6UVJ0 657 aa22.54■■□□□ 1.2
PSEN1-225ENST00000560005 MTSS1LQ765P7 747 aa22.54■■□□□ 1.2
PSEN1-225ENST00000560005 GPR65Q8IYL9 337 aa22.54■■□□□ 1.2
PSEN1-225ENST00000560005 FGF13Q92913 245 aa22.54■■□□□ 1.2
PSEN1-225ENST00000560005 SECISBP2LQ93073 1101 aaKnown RBP22.54■■□□□ 1.2
PSEN1-225ENST00000560005 CPB2Q96IY4 423 aa22.54■■□□□ 1.2
PSEN1-225ENST00000560005 MTMR9Q96QG7 549 aa22.54■■□□□ 1.2
PSEN1-225ENST00000560005 WRAP73Q9P2S5 460 aaPredicted RBP22.54■■□□□ 1.2
PSEN1-225ENST00000560005 CCDC39Q9UFE4 941 aa22.54■■□□□ 1.2
PSEN1-225ENST00000560005 ADAM28Q9UKQ2 775 aa22.54■■□□□ 1.2
PSEN1-225ENST00000560005 STK24Q9Y6E0 443 aa22.54■■□□□ 1.2
PSEN1-225ENST00000560005 SLC26A4O43511 780 aa22.53■■□□□ 1.2
PSEN1-225ENST00000560005 RFC5P40937 340 aa22.53■■□□□ 1.2
PSEN1-225ENST00000560005 UBA7P41226 1012 aa22.53■■□□□ 1.2
PSEN1-225ENST00000560005 FXR2P51116 673 aaKnown RBP eCLIP22.53■■□□□ 1.2
PSEN1-225ENST00000560005 LMNB2Q03252 620 aa22.53■■□□□ 1.2
PSEN1-225ENST00000560005 CAMK4Q16566 473 aa22.53■■□□□ 1.2
PSEN1-225ENST00000560005 PRSS55Q6UWB4 352 aaPredicted RBP22.53■■□□□ 1.2
PSEN1-225ENST00000560005 EXOC8Q8IYI6 725 aa22.53■■□□□ 1.2
PSEN1-225ENST00000560005 IQUBQ8NA54 791 aa22.53■■□□□ 1.2
PSEN1-225ENST00000560005 ZBTB44Q8NCP5 570 aa22.53■■□□□ 1.2
PSEN1-225ENST00000560005 CCDC51Q96ER9 411 aa22.53■■□□□ 1.2
PSEN1-225ENST00000560005 OSBPL6Q9BZF3 934 aa22.53■■□□□ 1.2
PSEN1-225ENST00000560005 CCSER1Q9C0I3 900 aa22.53■■□□□ 1.2
PSEN1-225ENST00000560005 EPC1Q9H2F5 836 aa22.53■■□□□ 1.2
PSEN1-225ENST00000560005 TMEM60Q9H2L4 133 aa22.53■■□□□ 1.2
PSEN1-225ENST00000560005 LTB4R2Q9NPC1 389 aa22.53■■□□□ 1.2
PSEN1-225ENST00000560005 ZSCAN32Q9NX65 697 aa22.53■■□□□ 1.2
PSEN1-225ENST00000560005 FBXW11Q9UKB1 542 aa22.53■■□□□ 1.2
PSEN1-225ENST00000560005 CFAP47Q6ZTR5 3102 aa22.52■■□□□ 1.2
PSEN1-225ENST00000560005 DCDC2BA2VCK2 349 aa22.52■■□□□ 1.2
PSEN1-225ENST00000560005 PRR5-ARHGAP8B1AHC4 643 aa22.52■■□□□ 1.2
PSEN1-225ENST00000560005 AXLP30530 894 aa22.52■■□□□ 1.2
PSEN1-225ENST00000560005 ARHGAP8P85298 464 aa22.52■■□□□ 1.2
PSEN1-225ENST00000560005 EMC2Q15006 297 aa22.52■■□□□ 1.2
PSEN1-225ENST00000560005 ZRSR1Q15695 479 aaKnown RBP22.52■■□□□ 1.2
PSEN1-225ENST00000560005 RTP2Q5QGT7 225 aa22.52■■□□□ 1.2
PSEN1-225ENST00000560005 LIN9Q5TKA1 542 aa22.52■■□□□ 1.2
PSEN1-225ENST00000560005 TSSK4Q6SA08 328 aa22.52■■□□□ 1.2
PSEN1-225ENST00000560005 KRBA2Q6ZNG9 492 aa22.52■■□□□ 1.2
PSEN1-225ENST00000560005 GSTCDQ8NEC7 633 aa22.52■■□□□ 1.2
PSEN1-225ENST00000560005 TCP11Q8WWU5 503 aa22.52■■□□□ 1.2
PSEN1-225ENST00000560005 FAM20AQ96MK3 541 aa22.52■■□□□ 1.2
PSEN1-225ENST00000560005 NXF3Q9H4D5 531 aaKnown RBP22.52■■□□□ 1.2
PSEN1-225ENST00000560005 CACNG4Q9UBN1 327 aa22.52■■□□□ 1.2
PSEN1-225ENST00000560005 USP18Q9UMW8 372 aa22.52■■□□□ 1.2
PSEN1-225ENST00000560005 GIT1Q9Y2X7 761 aa22.52■■□□□ 1.2
PSEN1-225ENST00000560005 PPME1Q9Y570 386 aa22.52■■□□□ 1.2
PSEN1-225ENST00000560005 POLR2DO15514 142 aaKnown RBP22.51■■□□□ 1.19
PSEN1-225ENST00000560005 ASAP2O43150 1006 aa22.51■■□□□ 1.19
PSEN1-225ENST00000560005 DKC1O60832 514 aaKnown RBP eCLIP22.51■■□□□ 1.19
PSEN1-225ENST00000560005 TADA2AO75478 443 aa22.51■■□□□ 1.19
PSEN1-225ENST00000560005 AKAP5P24588 427 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms