RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 STARD7Q9NQZ5 370 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 GTF2IRD1Q9UHL9 959 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 HOOK1Q9UJC3 728 aaKnown RBP5.74□□□□□ -1.49
SPG11-220ENST00000559933 OGDHLQ9ULD0 1010 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 ODF2LQ9ULJ1 636 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 GINS2Q9Y248 185 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 COL4A3BPQ9Y5P4 624 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 UMODL1Q5DID0 1318 aa5.74□□□□□ -1.49
SPG11-220ENST00000559933 COL1A2P08123 1366 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 A0A0U1RQG5 324 aaPredicted RBP5.73□□□□□ -1.49
SPG11-220ENST00000559933 PVALEFA0A1B0GWK0 134 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 DENND3A2RUS2 1198 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 MBLAC1A4D2B0 266 aaPredicted RBP5.73□□□□□ -1.49
SPG11-220ENST00000559933 FAM229AH3BQW9 127 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 DNM1LO00429 736 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 CLIC2O15247 247 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 AP5Z1O43299 807 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 MSCO60682 206 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 PQBP1O60828 265 aaKnown RBP5.73□□□□□ -1.49
SPG11-220ENST00000559933 SASH3O75995 380 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 SGPL1O95470 568 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 IQCF3P0C7M6 154 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 CCDC192P0DO97 292 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 HARSP12081 509 aaKnown RBP5.73□□□□□ -1.49
SPG11-220ENST00000559933 XRCC6P12956 609 aaKnown RBP eCLIP5.73□□□□□ -1.49
SPG11-220ENST00000559933 NID1P14543 1247 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 CPB1P15086 417 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 EN2P19622 333 aaPredicted RBP5.73□□□□□ -1.49
SPG11-220ENST00000559933 BRD2P25440 801 aaKnown RBP5.73□□□□□ -1.49
SPG11-220ENST00000559933 HOXC8P31273 242 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 DMP1Q13316 513 aaPredicted RBP5.73□□□□□ -1.49
SPG11-220ENST00000559933 PTGISQ16647 500 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 TRIM60Q495X7 471 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 ANKRD40Q6AI12 368 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 C16orf46Q6P387 395 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 SLC39A4Q6P5W5 647 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 ELMSAN1Q6PJG2 1045 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 C20orf204Q6ZNR8 217 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 EPM2AIP1Q7L775 607 aaPredicted RBP5.73□□□□□ -1.49
SPG11-220ENST00000559933 FAM178BQ8IXR5 827 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 KIAA0319LQ8IZA0 1049 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 RGL4Q8IZJ4 473 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 ADSSL1Q8N142 457 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 TMEM130Q8N3G9 435 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 PCSK9Q8NBP7 692 aaKnown RBP5.73□□□□□ -1.49
SPG11-220ENST00000559933 RNF149Q8NC42 400 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 TMEM161BQ8NDZ6 487 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 MCPH1Q8NEM0 835 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 DEPTORQ8TB45 409 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 NOC3LQ8WTT2 800 aaKnown RBP5.73□□□□□ -1.49
SPG11-220ENST00000559933 TMEM40Q8WWA1 233 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 PSPC1Q8WXF1 523 aaKnown RBP5.73□□□□□ -1.49
SPG11-220ENST00000559933 PBXIP1Q96AQ6 731 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 CPB2Q96IY4 423 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 DRC1Q96MC2 740 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 SCLT1Q96NL6 688 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 OSMRQ99650 979 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 DUSP9Q99956 384 aaKnown RBP5.73□□□□□ -1.49
SPG11-220ENST00000559933 LRRC27Q9C0I9 530 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 ADAMTS10Q9H324 1103 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 SEMA6BQ9H3T3 888 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 KMT5AQ9NQR1 393 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 PRDM10Q9NQV6 1147 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 RMND1Q9NWS8 449 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 ALPK3Q96L96 1907 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 NRCAMQ92823 1304 aa5.73□□□□□ -1.49
SPG11-220ENST00000559933 KAT6AQ92794 2004 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 GOLGA8IPA6NC78 632 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 RRN3P2A6NIE6 340 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 GOLGA8JA6NMD2 632 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 ANKRD63C9JTQ0 380 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 INO80B-WBP1J3KQ70 363 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 ARVCFO00192 962 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 TGFB1I1O43294 461 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 XYLBO75191 536 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 GPR32O75388 356 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 LETM1O95202 739 aaPredicted RBP5.72□□□□□ -1.49
SPG11-220ENST00000559933 PRKCBP05771 671 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 MYL1P05976 194 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 ATP1A3P13637 1013 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 GAP43P17677 238 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 IBSPP21815 317 aaPredicted RBP5.72□□□□□ -1.49
SPG11-220ENST00000559933 THPOP40225 353 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 NAMPTP43490 491 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 GJA8P48165 433 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 GPC3P51654 580 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 NLRP11P59045 1033 aaKnown RBP5.72□□□□□ -1.49
SPG11-220ENST00000559933 MBTD1Q05BQ5 628 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 MGAT3Q09327 533 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 PAK1Q13153 545 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 NCAPHQ15003 741 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 IQCB1Q15051 598 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 PKN2Q16513 984 aaKnown RBP5.72□□□□□ -1.49
SPG11-220ENST00000559933 LRRC26Q2I0M4 334 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 TCTN1Q2MV58 587 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 TRIM71Q2Q1W2 868 aaKnown RBP5.72□□□□□ -1.49
SPG11-220ENST00000559933 ZCWPW2Q504Y3 356 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 SEZ6Q53EL9 994 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 COX20Q5RI15 118 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 ZBTB41Q5SVQ8 909 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms