RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 NACC1Q96RE7 527 aa17.92■□□□□ 0.46
CDC42BPB-205ENST00000559245 CCDC113Q9H0I3 377 aa17.92■□□□□ 0.46
CDC42BPB-205ENST00000559245 TMEM60Q9H2L4 133 aa17.92■□□□□ 0.46
CDC42BPB-205ENST00000559245 NCDNQ9UBB6 729 aa17.92■□□□□ 0.46
CDC42BPB-205ENST00000559245 MRPS23Q9Y3D9 190 aaKnown RBP17.92■□□□□ 0.46
CDC42BPB-205ENST00000559245 PCDHGA2Q9Y5H1 932 aa17.92■□□□□ 0.46
CDC42BPB-205ENST00000559245 CDY1Q9Y6F8 540 aa17.92■□□□□ 0.46
CDC42BPB-205ENST00000559245 PDCD11Q14690 1871 aaKnown RBP17.92■□□□□ 0.46
CDC42BPB-205ENST00000559245 TPRP12270 2363 aaKnown RBP17.91■□□□□ 0.46
CDC42BPB-205ENST00000559245 B3GAT3O94766 335 aa17.91■□□□□ 0.46
CDC42BPB-205ENST00000559245 TARSP26639 723 aaKnown RBP17.91■□□□□ 0.46
CDC42BPB-205ENST00000559245 RBM25P49756 843 aaKnown RBP17.91■□□□□ 0.46
CDC42BPB-205ENST00000559245 RSPO4Q2I0M5 234 aaPredicted RBP17.91■□□□□ 0.46
CDC42BPB-205ENST00000559245 GLRA4Q5JXX5 417 aa17.91■□□□□ 0.46
CDC42BPB-205ENST00000559245 ZBTB41Q5SVQ8 909 aa17.91■□□□□ 0.46
CDC42BPB-205ENST00000559245 TPRG1Q6ZUI0 275 aa17.91■□□□□ 0.46
CDC42BPB-205ENST00000559245 DIS3L2Q8IYB7 885 aaKnown RBP17.91■□□□□ 0.46
CDC42BPB-205ENST00000559245 NECAB1Q8N987 351 aa17.91■□□□□ 0.46
CDC42BPB-205ENST00000559245 ATRIPQ8WXE1 791 aa17.91■□□□□ 0.46
CDC42BPB-205ENST00000559245 MCRS1Q96EZ8 462 aa17.91■□□□□ 0.46
CDC42BPB-205ENST00000559245 RALGAPA1Q6GYQ0 2036 aa17.91■□□□□ 0.46
CDC42BPB-205ENST00000559245 ECI2O75521 394 aa17.9■□□□□ 0.46
CDC42BPB-205ENST00000559245 TKTP29401 623 aaKnown RBP17.9■□□□□ 0.46
CDC42BPB-205ENST00000559245 NAMPTP43490 491 aa17.9■□□□□ 0.46
CDC42BPB-205ENST00000559245 CLCNKBP51801 687 aa17.9■□□□□ 0.46
CDC42BPB-205ENST00000559245 FOSBP53539 338 aa17.9■□□□□ 0.46
CDC42BPB-205ENST00000559245 ANKRD1Q15327 319 aa17.9■□□□□ 0.46
CDC42BPB-205ENST00000559245 DCAF4L1Q3SXM0 396 aa17.9■□□□□ 0.46
CDC42BPB-205ENST00000559245 PADI6Q6TGC4 694 aa17.9■□□□□ 0.46
CDC42BPB-205ENST00000559245 ZBTB44Q8NCP5 570 aa17.9■□□□□ 0.46
CDC42BPB-205ENST00000559245 DEPTORQ8TB45 409 aa17.9■□□□□ 0.46
CDC42BPB-205ENST00000559245 CLDN23Q96B33 292 aa17.9■□□□□ 0.46
CDC42BPB-205ENST00000559245 PPP1R10Q96QC0 940 aaKnown RBP17.9■□□□□ 0.46
CDC42BPB-205ENST00000559245 NELL2Q99435 816 aa17.9■□□□□ 0.46
CDC42BPB-205ENST00000559245 POLR3CQ9BUI4 534 aaPredicted RBP17.9■□□□□ 0.46
CDC42BPB-205ENST00000559245 PLA2G2FQ9BZM2 168 aa17.9■□□□□ 0.46
CDC42BPB-205ENST00000559245 GDE1Q9NZC3 331 aa17.9■□□□□ 0.46
CDC42BPB-205ENST00000559245 BACE2Q9Y5Z0 518 aa17.9■□□□□ 0.46
CDC42BPB-205ENST00000559245 COL4A2P08572 1712 aa17.89■□□□□ 0.46
CDC42BPB-205ENST00000559245 NCAM2O15394 837 aa17.89■□□□□ 0.45
CDC42BPB-205ENST00000559245 RHOP08100 348 aa17.89■□□□□ 0.45
CDC42BPB-205ENST00000559245 CYP11B2P19099 503 aa17.89■□□□□ 0.45
CDC42BPB-205ENST00000559245 MCM7P33993 719 aa17.89■□□□□ 0.45
CDC42BPB-205ENST00000559245 SLC5A9Q2M3M2 681 aa17.89■□□□□ 0.45
CDC42BPB-205ENST00000559245 CD300LGQ6UXG3 332 aa17.89■□□□□ 0.45
CDC42BPB-205ENST00000559245 ANKS3Q6ZW76 656 aa17.89■□□□□ 0.45
CDC42BPB-205ENST00000559245 GTF3C6Q969F1 213 aa17.89■□□□□ 0.45
CDC42BPB-205ENST00000559245 DDX27Q96GQ7 796 aaKnown RBP17.89■□□□□ 0.45
CDC42BPB-205ENST00000559245 UROC1Q96N76 676 aa17.89■□□□□ 0.45
CDC42BPB-205ENST00000559245 GOLGA2P5Q9HBQ8 144 aa17.89■□□□□ 0.45
CDC42BPB-205ENST00000559245 ZSCAN32Q9NX65 697 aa17.89■□□□□ 0.45
CDC42BPB-205ENST00000559245 MYH11P35749 1972 aa17.89■□□□□ 0.45
CDC42BPB-205ENST00000559245 ARHGEF35A5YM69 484 aa17.88■□□□□ 0.45
CDC42BPB-205ENST00000559245 I3L4J1 428 aa17.88■□□□□ 0.45
CDC42BPB-205ENST00000559245 TRAPPC3O43617 180 aa17.88■□□□□ 0.45
CDC42BPB-205ENST00000559245 BRCC3P46736 316 aa17.88■□□□□ 0.45
CDC42BPB-205ENST00000559245 RPS9P46781 194 aaKnown RBP17.88■□□□□ 0.45
CDC42BPB-205ENST00000559245 TRIM29Q14134 588 aa17.88■□□□□ 0.45
CDC42BPB-205ENST00000559245 PPP2R5AQ15172 486 aa17.88■□□□□ 0.45
CDC42BPB-205ENST00000559245 ME3Q16798 604 aa17.88■□□□□ 0.45
CDC42BPB-205ENST00000559245 UPP1Q16831 310 aa17.88■□□□□ 0.45
CDC42BPB-205ENST00000559245 POTEHQ6S545 545 aa17.88■□□□□ 0.45
CDC42BPB-205ENST00000559245 ZNF852Q6ZMS4 543 aa17.88■□□□□ 0.45
CDC42BPB-205ENST00000559245 GPR161Q8N6U8 529 aaKnown RBP17.88■□□□□ 0.45
CDC42BPB-205ENST00000559245 C3orf58Q8NDZ4 430 aa17.88■□□□□ 0.45
CDC42BPB-205ENST00000559245 NSUN7Q8NE18 718 aaKnown RBP17.88■□□□□ 0.45
CDC42BPB-205ENST00000559245 NELL1Q92832 810 aa17.88■□□□□ 0.45
CDC42BPB-205ENST00000559245 KIFC3Q9BVG8 833 aa17.88■□□□□ 0.45
CDC42BPB-205ENST00000559245 AVENQ9NQS1 362 aaPredicted RBP17.88■□□□□ 0.45
CDC42BPB-205ENST00000559245 HEBP1Q9NRV9 189 aa17.88■□□□□ 0.45
CDC42BPB-205ENST00000559245 SMG5Q9UPR3 1016 aaKnown RBP17.88■□□□□ 0.45
CDC42BPB-205ENST00000559245 LILRB5O75023 590 aa17.87■□□□□ 0.45
CDC42BPB-205ENST00000559245 LARGE1O95461 756 aa17.87■□□□□ 0.45
CDC42BPB-205ENST00000559245 LRG1P02750 347 aa17.87■□□□□ 0.45
CDC42BPB-205ENST00000559245 CEBPBP17676 345 aa17.87■□□□□ 0.45
CDC42BPB-205ENST00000559245 PTPN2P17706 415 aa17.87■□□□□ 0.45
CDC42BPB-205ENST00000559245 RPA1P27694 616 aa17.87■□□□□ 0.45
CDC42BPB-205ENST00000559245 ROR1Q01973 937 aa17.87■□□□□ 0.45
CDC42BPB-205ENST00000559245 FZD5Q13467 585 aa17.87■□□□□ 0.45
CDC42BPB-205ENST00000559245 NT5DC1Q5TFE4 455 aa17.87■□□□□ 0.45
CDC42BPB-205ENST00000559245 ATF7IP2Q5U623 682 aa17.87■□□□□ 0.45
CDC42BPB-205ENST00000559245 TANGO2Q6ICL3 276 aa17.87■□□□□ 0.45
CDC42BPB-205ENST00000559245 TSSK4Q6SA08 328 aa17.87■□□□□ 0.45
CDC42BPB-205ENST00000559245 ZNF461Q8TAF7 563 aa17.87■□□□□ 0.45
CDC42BPB-205ENST00000559245 ERMNQ8TAM6 284 aa17.87■□□□□ 0.45
CDC42BPB-205ENST00000559245 SECISBP2LQ93073 1101 aaKnown RBP17.87■□□□□ 0.45
CDC42BPB-205ENST00000559245 ELSPBP1Q96BH3 223 aa17.87■□□□□ 0.45
CDC42BPB-205ENST00000559245 IFT74Q96LB3 600 aa17.87■□□□□ 0.45
CDC42BPB-205ENST00000559245 EPC1Q9H2F5 836 aa17.87■□□□□ 0.45
CDC42BPB-205ENST00000559245 POLD4Q9HCU8 107 aa17.87■□□□□ 0.45
CDC42BPB-205ENST00000559245 DAXXQ9UER7 740 aaPredicted RBP17.87■□□□□ 0.45
CDC42BPB-205ENST00000559245 MRPS17Q9Y2R5 130 aaKnown RBP17.87■□□□□ 0.45
CDC42BPB-205ENST00000559245 EPG5Q9HCE0 2579 aa17.87■□□□□ 0.45
CDC42BPB-205ENST00000559245 ARHGEF37A1IGU5 675 aa17.86■□□□□ 0.45
CDC42BPB-205ENST00000559245 SHISA7A6NL88 538 aa17.86■□□□□ 0.45
CDC42BPB-205ENST00000559245 JAK2O60674 1132 aa17.86■□□□□ 0.45
CDC42BPB-205ENST00000559245 SDHBP21912 280 aa17.86■□□□□ 0.45
CDC42BPB-205ENST00000559245 ELF1P32519 619 aa17.86■□□□□ 0.45
CDC42BPB-205ENST00000559245 EFNA5P52803 228 aa17.86■□□□□ 0.45
CDC42BPB-205ENST00000559245 ADCY1Q08828 1119 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms