RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 FXR2P51116 673 aaKnown RBP eCLIP12.38□□□□□ -0.43
CHRNA3-205ENST00000559080 PTENP60484 403 aa12.38□□□□□ -0.43
CHRNA3-205ENST00000559080 POU5F1BQ06416 359 aa12.38□□□□□ -0.43
CHRNA3-205ENST00000559080 PTGDRQ13258 359 aa12.38□□□□□ -0.43
CHRNA3-205ENST00000559080 RTP2Q5QGT7 225 aa12.38□□□□□ -0.43
CHRNA3-205ENST00000559080 NOTUMQ6P988 496 aa12.38□□□□□ -0.43
CHRNA3-205ENST00000559080 MAEAQ7L5Y9 396 aa12.38□□□□□ -0.43
CHRNA3-205ENST00000559080 IFNLR1Q8IU57 520 aaPredicted RBP12.38□□□□□ -0.43
CHRNA3-205ENST00000559080 ITFG1Q8TB96 612 aa12.38□□□□□ -0.43
CHRNA3-205ENST00000559080 SNX29Q8TEQ0 813 aa12.38□□□□□ -0.43
CHRNA3-205ENST00000559080 RABGGTAQ92696 567 aa12.38□□□□□ -0.43
CHRNA3-205ENST00000559080 CPB2Q96IY4 423 aa12.38□□□□□ -0.43
CHRNA3-205ENST00000559080 CLSTN3Q9BQT9 956 aa12.38□□□□□ -0.43
CHRNA3-205ENST00000559080 PRMT8Q9NR22 394 aaPredicted RBP12.38□□□□□ -0.43
CHRNA3-205ENST00000559080 CACNG4Q9UBN1 327 aa12.38□□□□□ -0.43
CHRNA3-205ENST00000559080 LRWD1Q9UFC0 647 aa12.38□□□□□ -0.43
CHRNA3-205ENST00000559080 PCDHB6Q9Y5E3 794 aa12.38□□□□□ -0.43
CHRNA3-205ENST00000559080 STK24Q9Y6E0 443 aa12.38□□□□□ -0.43
CHRNA3-205ENST00000559080 CFAP47Q6ZTR5 3102 aa12.37□□□□□ -0.43
CHRNA3-205ENST00000559080 SDK1Q7Z5N4 2213 aa12.37□□□□□ -0.43
CHRNA3-205ENST00000559080 A0A087WWV3 80 aa12.37□□□□□ -0.43
CHRNA3-205ENST00000559080 LRRIQ4A6NIV6 560 aa12.37□□□□□ -0.43
CHRNA3-205ENST00000559080 HNRNPA1P09651 372 aaKnown RBP eCLIP12.37□□□□□ -0.43
CHRNA3-205ENST00000559080 GLRA2P23416 452 aa12.37□□□□□ -0.43
CHRNA3-205ENST00000559080 RPS9P46781 194 aaKnown RBP12.37□□□□□ -0.43
CHRNA3-205ENST00000559080 MBTD1Q05BQ5 628 aa12.37□□□□□ -0.43
CHRNA3-205ENST00000559080 AMHR2Q16671 573 aa12.37□□□□□ -0.43
CHRNA3-205ENST00000559080 ST3GAL2Q16842 350 aa12.37□□□□□ -0.43
CHRNA3-205ENST00000559080 RILPL1Q5EBL4 403 aa12.37□□□□□ -0.43
CHRNA3-205ENST00000559080 ZBTB41Q5SVQ8 909 aa12.37□□□□□ -0.43
CHRNA3-205ENST00000559080 POTEHQ6S545 545 aa12.37□□□□□ -0.43
CHRNA3-205ENST00000559080 MTSS1LQ765P7 747 aa12.37□□□□□ -0.43
CHRNA3-205ENST00000559080 ZBTB8OSQ8IWT0 167 aa12.37□□□□□ -0.43
CHRNA3-205ENST00000559080 HACE1Q8IYU2 909 aa12.37□□□□□ -0.43
CHRNA3-205ENST00000559080 KXD1Q9BQD3 176 aa12.37□□□□□ -0.43
CHRNA3-205ENST00000559080 PAAF1Q9BRP4 392 aa12.37□□□□□ -0.43
CHRNA3-205ENST00000559080 NFKBIZQ9BYH8 718 aa12.37□□□□□ -0.43
CHRNA3-205ENST00000559080 TRIM6Q9C030 488 aaPredicted RBP12.37□□□□□ -0.43
CHRNA3-205ENST00000559080 CSRNP2Q9H175 543 aa12.37□□□□□ -0.43
CHRNA3-205ENST00000559080 NXF3Q9H4D5 531 aaKnown RBP12.37□□□□□ -0.43
CHRNA3-205ENST00000559080 GIT1Q9Y2X7 761 aa12.37□□□□□ -0.43
CHRNA3-205ENST00000559080 KIF26AQ9ULI4 1882 aaPredicted RBP12.37□□□□□ -0.43
CHRNA3-205ENST00000559080 EML5Q05BV3 1969 aa12.36□□□□□ -0.43
CHRNA3-205ENST00000559080 TBC1D4O60343 1298 aa12.36□□□□□ -0.43
CHRNA3-205ENST00000559080 NR1I2O75469 434 aa12.36□□□□□ -0.43
CHRNA3-205ENST00000559080 C8AP07357 584 aa12.36□□□□□ -0.43
CHRNA3-205ENST00000559080 TDGF1P13385 188 aa12.36□□□□□ -0.43
CHRNA3-205ENST00000559080 AKAP5P24588 427 aa12.36□□□□□ -0.43
CHRNA3-205ENST00000559080 HOXA9P31269 272 aa12.36□□□□□ -0.43
CHRNA3-205ENST00000559080 PRPHP41219 470 aa12.36□□□□□ -0.43
CHRNA3-205ENST00000559080 TOB1P50616 345 aaPredicted RBP12.36□□□□□ -0.43
CHRNA3-205ENST00000559080 PFKPQ01813 784 aa12.36□□□□□ -0.43
CHRNA3-205ENST00000559080 CREMQ03060 361 aa12.36□□□□□ -0.43
CHRNA3-205ENST00000559080 KRT79Q5XKE5 535 aa12.36□□□□□ -0.43
CHRNA3-205ENST00000559080 PADI6Q6TGC4 694 aa12.36□□□□□ -0.43
CHRNA3-205ENST00000559080 DTHD1Q6ZMT9 781 aa12.36□□□□□ -0.43
CHRNA3-205ENST00000559080 TPRG1Q6ZUI0 275 aa12.36□□□□□ -0.43
CHRNA3-205ENST00000559080 NPAS3Q8IXF0 933 aa12.36□□□□□ -0.43
CHRNA3-205ENST00000559080 ZNF687Q8N1G0 1237 aa12.36□□□□□ -0.43
CHRNA3-205ENST00000559080 C4orf32Q8N8J7 132 aa12.36□□□□□ -0.43
CHRNA3-205ENST00000559080 LNX1Q8TBB1 728 aaPredicted RBP12.36□□□□□ -0.43
CHRNA3-205ENST00000559080 SECISBP2LQ93073 1101 aaKnown RBP12.36□□□□□ -0.43
CHRNA3-205ENST00000559080 APOL6Q9BWW8 343 aa12.36□□□□□ -0.43
CHRNA3-205ENST00000559080 PLA2G2FQ9BZM2 168 aa12.36□□□□□ -0.43
CHRNA3-205ENST00000559080 C2orf40Q9H1Z8 148 aa12.36□□□□□ -0.43
CHRNA3-205ENST00000559080 GPRC5CQ9NQ84 441 aa12.36□□□□□ -0.43
CHRNA3-205ENST00000559080 HCFC1R1Q9NWW0 138 aa12.36□□□□□ -0.43
CHRNA3-205ENST00000559080 USP18Q9UMW8 372 aa12.36□□□□□ -0.43
CHRNA3-205ENST00000559080 CCL16O15467 120 aa12.35□□□□□ -0.43
CHRNA3-205ENST00000559080 ADAM12O43184 909 aa12.35□□□□□ -0.43
CHRNA3-205ENST00000559080 ARF4P18085 180 aaPredicted RBP12.35□□□□□ -0.43
CHRNA3-205ENST00000559080 CYP11B2P19099 503 aa12.35□□□□□ -0.43
CHRNA3-205ENST00000559080 GRIK3Q13003 919 aa12.35□□□□□ -0.43
CHRNA3-205ENST00000559080 MTAPQ13126 283 aa12.35□□□□□ -0.43
CHRNA3-205ENST00000559080 PDIA5Q14554 519 aa12.35□□□□□ -0.43
CHRNA3-205ENST00000559080 PPP2R5AQ15172 486 aa12.35□□□□□ -0.43
CHRNA3-205ENST00000559080 TMEM132AQ24JP5 1023 aa12.35□□□□□ -0.43
CHRNA3-205ENST00000559080 PPM1LQ5SGD2 360 aa12.35□□□□□ -0.43
CHRNA3-205ENST00000559080 IGSF22Q8N9C0 903 aa12.35□□□□□ -0.43
CHRNA3-205ENST00000559080 DEPTORQ8TB45 409 aa12.35□□□□□ -0.43
CHRNA3-205ENST00000559080 PIK3R5Q8WYR1 880 aa12.35□□□□□ -0.43
CHRNA3-205ENST00000559080 NELL2Q99435 816 aa12.35□□□□□ -0.43
CHRNA3-205ENST00000559080 BHMT2Q9H2M3 363 aa12.35□□□□□ -0.43
CHRNA3-205ENST00000559080 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.35□□□□□ -0.43
CHRNA3-205ENST00000559080 DDX19AQ9NUU7 478 aaKnown RBP12.35□□□□□ -0.43
CHRNA3-205ENST00000559080 PRMT7Q9NVM4 692 aaPredicted RBP12.35□□□□□ -0.43
CHRNA3-205ENST00000559080 DNMT3BQ9UBC3 853 aaKnown RBP12.35□□□□□ -0.43
CHRNA3-205ENST00000559080 KIAA1024Q9UPX6 916 aa12.35□□□□□ -0.43
CHRNA3-205ENST00000559080 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.35□□□□□ -0.43
CHRNA3-205ENST00000559080 CITO14578 2027 aa12.35□□□□□ -0.43
CHRNA3-205ENST00000559080 ZMYM2Q9UBW7 1377 aa12.34□□□□□ -0.43
CHRNA3-205ENST00000559080 B4GALT5O43286 388 aa12.34□□□□□ -0.43
CHRNA3-205ENST00000559080 TADA2AO75478 443 aa12.34□□□□□ -0.43
CHRNA3-205ENST00000559080 POU2F2P09086 479 aa12.34□□□□□ -0.43
CHRNA3-205ENST00000559080 NAMPTP43490 491 aa12.34□□□□□ -0.43
CHRNA3-205ENST00000559080 ATP2C1P98194 919 aaPredicted RBP12.34□□□□□ -0.43
CHRNA3-205ENST00000559080 SPEM2Q0P670 501 aa12.34□□□□□ -0.43
CHRNA3-205ENST00000559080 HSP90AA2PQ14568 343 aaPredicted RBP12.34□□□□□ -0.43
CHRNA3-205ENST00000559080 LARP1BQ659C4 914 aaKnown RBP12.34□□□□□ -0.43
CHRNA3-205ENST00000559080 CDCA2Q69YH5 1023 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms